RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 XP32Q5T750 250 aa3.68□□□□□ -1.82
GABRB3-221ENST00000636690 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
GABRB3-221ENST00000636690 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
GABRB3-221ENST00000636690 A0A1B0GU33 70 aa3.65□□□□□ -1.83
GABRB3-221ENST00000636690 H1FX-AS1Q4G0G2 97 aa3.64□□□□□ -1.83
GABRB3-221ENST00000636690 FAT1Q14517 4588 aa3.61□□□□□ -1.83
GABRB3-221ENST00000636690 TNXBP22105 4242 aa3.6□□□□□ -1.83
GABRB3-221ENST00000636690 S4R3F8 94 aa3.6□□□□□ -1.83
GABRB3-221ENST00000636690 DMBT1Q9UGM3 2413 aaPredicted RBP3.6□□□□□ -1.83
GABRB3-221ENST00000636690 H0YAA0 97 aa3.59□□□□□ -1.83
GABRB3-221ENST00000636690 RBM12B-AS1Q9P1G2 102 aa3.59□□□□□ -1.83
GABRB3-221ENST00000636690 K7ERS5 55 aa3.58□□□□□ -1.84
GABRB3-221ENST00000636690 RYR1P21817 5038 aa3.58□□□□□ -1.84
GABRB3-221ENST00000636690 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
GABRB3-221ENST00000636690 HSPG2P98160 4391 aa3.57□□□□□ -1.84
GABRB3-221ENST00000636690 KRTAP17-1Q9BYP8 105 aa3.55□□□□□ -1.84
GABRB3-221ENST00000636690 FAT3Q8TDW7 4589 aa3.54□□□□□ -1.84
GABRB3-221ENST00000636690 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
GABRB3-221ENST00000636690 CSAG1Q6PB30 78 aa3.51□□□□□ -1.85
GABRB3-221ENST00000636690 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
GABRB3-221ENST00000636690 M0QZ58 72 aa3.48□□□□□ -1.85
GABRB3-221ENST00000636690 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
GABRB3-221ENST00000636690 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
GABRB3-221ENST00000636690 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
GABRB3-221ENST00000636690 ADM2Q7Z4H4 148 aa3.44□□□□□ -1.86
GABRB3-221ENST00000636690 RYR3Q15413 4870 aa3.43□□□□□ -1.86
GABRB3-221ENST00000636690 ROMO1P60602 79 aa3.43□□□□□ -1.86
GABRB3-221ENST00000636690 P0C880 135 aa3.42□□□□□ -1.86
GABRB3-221ENST00000636690 KRTAP13-4Q3LI77 160 aa3.42□□□□□ -1.86
GABRB3-221ENST00000636690 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
GABRB3-221ENST00000636690 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
GABRB3-221ENST00000636690 MYCBP2O75592 4640 aa3.4□□□□□ -1.87
GABRB3-221ENST00000636690 A0A0D9SG42 100 aa3.35□□□□□ -1.87
GABRB3-221ENST00000636690 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
GABRB3-221ENST00000636690 R4GN34 69 aa3.33□□□□□ -1.88
GABRB3-221ENST00000636690 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
GABRB3-221ENST00000636690 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
GABRB3-221ENST00000636690 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
GABRB3-221ENST00000636690 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
GABRB3-221ENST00000636690 CRIPTQ9P021 101 aa3.31□□□□□ -1.88
GABRB3-221ENST00000636690 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
GABRB3-221ENST00000636690 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
GABRB3-221ENST00000636690 LRP2P98164 4655 aa3.29□□□□□ -1.88
GABRB3-221ENST00000636690 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
GABRB3-221ENST00000636690 HERC2O95714 4834 aa3.23□□□□□ -1.89
GABRB3-221ENST00000636690 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
GABRB3-221ENST00000636690 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
GABRB3-221ENST00000636690 LPAP08519 4548 aa3.19□□□□□ -1.9
GABRB3-221ENST00000636690 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
GABRB3-221ENST00000636690 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
GABRB3-221ENST00000636690 CAMK2N1Q7Z7J9 78 aa3.14□□□□□ -1.91
GABRB3-221ENST00000636690 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
GABRB3-221ENST00000636690 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
GABRB3-221ENST00000636690 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
GABRB3-221ENST00000636690 SPRR2GQ9BYE4 73 aa3.11□□□□□ -1.91
GABRB3-221ENST00000636690 TNP1P09430 55 aa3.06□□□□□ -1.92
GABRB3-221ENST00000636690 MT1HP80294 61 aa3.06□□□□□ -1.92
GABRB3-221ENST00000636690 HERC1Q15751 4861 aa3.06□□□□□ -1.92
GABRB3-221ENST00000636690 PLAC4Q8WY50 150 aa3.05□□□□□ -1.92
GABRB3-221ENST00000636690 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
GABRB3-221ENST00000636690 M0R2T5 61 aa3.03□□□□□ -1.92
GABRB3-221ENST00000636690 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
GABRB3-221ENST00000636690 PCLOQ9Y6V0 5065 aa3.02□□□□□ -1.93
GABRB3-221ENST00000636690 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
GABRB3-221ENST00000636690 MT2AP02795 61 aa2.99□□□□□ -1.93
GABRB3-221ENST00000636690 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
GABRB3-221ENST00000636690 MT1FP04733 61 aa2.97□□□□□ -1.93
GABRB3-221ENST00000636690 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
GABRB3-221ENST00000636690 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
GABRB3-221ENST00000636690 MUC2Q02817 5179 aa2.93□□□□□ -1.94
GABRB3-221ENST00000636690 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
GABRB3-221ENST00000636690 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
GABRB3-221ENST00000636690 MT1BP07438 61 aa2.88□□□□□ -1.95
GABRB3-221ENST00000636690 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
GABRB3-221ENST00000636690 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
GABRB3-221ENST00000636690 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
GABRB3-221ENST00000636690 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
GABRB3-221ENST00000636690 UBR4Q5T4S7 5183 aa2.85□□□□□ -1.95
GABRB3-221ENST00000636690 MT1XP80297 61 aa2.84□□□□□ -1.95
GABRB3-221ENST00000636690 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
GABRB3-221ENST00000636690 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
GABRB3-221ENST00000636690 KRTAP10-12P60413 245 aa2.8□□□□□ -1.96
GABRB3-221ENST00000636690 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
GABRB3-221ENST00000636690 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
GABRB3-221ENST00000636690 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
GABRB3-221ENST00000636690 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
GABRB3-221ENST00000636690 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
GABRB3-221ENST00000636690 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
GABRB3-221ENST00000636690 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
GABRB3-221ENST00000636690 MT3P25713 68 aa2.63□□□□□ -1.99
GABRB3-221ENST00000636690 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
GABRB3-221ENST00000636690 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
GABRB3-221ENST00000636690 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
GABRB3-221ENST00000636690 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
GABRB3-221ENST00000636690 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
GABRB3-221ENST00000636690 INE1O15225 51 aa2.51□□□□□ -2.01
GABRB3-221ENST00000636690 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
GABRB3-221ENST00000636690 USH2AO75445 5202 aa2.49□□□□□ -2.01
GABRB3-221ENST00000636690 MT1EP04732 61 aa2.49□□□□□ -2.01
GABRB3-221ENST00000636690 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms