RNA–Protein interactions for RNA: ENST00000636507.1

CACNB4-227, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-227ENST00000636507 A0A1B0GVY2 172 aa2.48□□□□□ -2.01
CACNB4-227ENST00000636507 DNAH17Q9UFH2 4485 aa2.47□□□□□ -2.01
CACNB4-227ENST00000636507 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
CACNB4-227ENST00000636507 AKAP9Q99996 3911 aa2.46□□□□□ -2.02
CACNB4-227ENST00000636507 SACSQ9NZJ4 4579 aa2.46□□□□□ -2.02
CACNB4-227ENST00000636507 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
CACNB4-227ENST00000636507 ANK3Q12955 4377 aaKnown RBP2.45□□□□□ -2.02
CACNB4-227ENST00000636507 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
CACNB4-227ENST00000636507 ANK2Q01484 3957 aa2.44□□□□□ -2.02
CACNB4-227ENST00000636507 FAT2Q9NYQ8 4349 aa2.43□□□□□ -2.02
CACNB4-227ENST00000636507 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
CACNB4-227ENST00000636507 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
CACNB4-227ENST00000636507 ZNF469Q96JG9 3925 aaPredicted RBP2.41□□□□□ -2.02
CACNB4-227ENST00000636507 DNAH9Q9NYC9 4486 aa2.41□□□□□ -2.02
CACNB4-227ENST00000636507 SRRM2Q9UQ35 2752 aaKnown RBP2.41□□□□□ -2.02
CACNB4-227ENST00000636507 TRRAPQ9Y4A5 3859 aa2.4□□□□□ -2.03
CACNB4-227ENST00000636507 LCE2AQ5TA79 106 aaPredicted RBP2.39□□□□□ -2.03
CACNB4-227ENST00000636507 HSPG2P98160 4391 aa2.38□□□□□ -2.03
CACNB4-227ENST00000636507 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
CACNB4-227ENST00000636507 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
CACNB4-227ENST00000636507 DNAH11Q96DT5 4516 aa2.35□□□□□ -2.03
CACNB4-227ENST00000636507 PKHD1L1Q86WI1 4243 aa2.35□□□□□ -2.03
CACNB4-227ENST00000636507 PKD1P98161 4303 aa2.33□□□□□ -2.04
CACNB4-227ENST00000636507 LCE2CQ5TA81 110 aa2.33□□□□□ -2.04
CACNB4-227ENST00000636507 SVEP1Q4LDE5 3571 aa2.32□□□□□ -2.04
CACNB4-227ENST00000636507 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
CACNB4-227ENST00000636507 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
CACNB4-227ENST00000636507 BIRC6Q9NR09 4857 aa2.25□□□□□ -2.05
CACNB4-227ENST00000636507 DNAH7Q8WXX0 4024 aa2.25□□□□□ -2.05
CACNB4-227ENST00000636507 PLECQ15149 4684 aaKnown RBP2.24□□□□□ -2.05
CACNB4-227ENST00000636507 CUBNO60494 3623 aa2.24□□□□□ -2.05
CACNB4-227ENST00000636507 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
CACNB4-227ENST00000636507 MT1HL1P0DM35 61 aa2.23□□□□□ -2.05
CACNB4-227ENST00000636507 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
CACNB4-227ENST00000636507 KRTAP9-6A0A140TA67 174 aa2.21□□□□□ -2.05
CACNB4-227ENST00000636507 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
CACNB4-227ENST00000636507 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
CACNB4-227ENST00000636507 KMT2CQ8NEZ4 4911 aaKnown RBP2.21□□□□□ -2.06
CACNB4-227ENST00000636507 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
CACNB4-227ENST00000636507 KRTAP4-8Q9BYQ9 185 aa2.2□□□□□ -2.06
CACNB4-227ENST00000636507 DNAH5Q8TE73 4624 aa2.2□□□□□ -2.06
CACNB4-227ENST00000636507 PKHD1P08F94 4074 aa2.19□□□□□ -2.06
CACNB4-227ENST00000636507 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
CACNB4-227ENST00000636507 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
CACNB4-227ENST00000636507 KRTAP4-5Q9BYR2 181 aa2.18□□□□□ -2.06
CACNB4-227ENST00000636507 KRTAP10-10P60014 251 aa2.18□□□□□ -2.06
CACNB4-227ENST00000636507 RYR3Q15413 4870 aa2.17□□□□□ -2.06
CACNB4-227ENST00000636507 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
CACNB4-227ENST00000636507 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
CACNB4-227ENST00000636507 HERC1Q15751 4861 aa2.16□□□□□ -2.06
CACNB4-227ENST00000636507 TNXBP22105 4242 aa2.15□□□□□ -2.07
CACNB4-227ENST00000636507 RYR2Q92736 4967 aa2.15□□□□□ -2.07
CACNB4-227ENST00000636507 FAT1Q14517 4588 aa2.13□□□□□ -2.07
CACNB4-227ENST00000636507 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
CACNB4-227ENST00000636507 HERC2O95714 4834 aa2.12□□□□□ -2.07
CACNB4-227ENST00000636507 EPPK1P58107 5090 aaKnown RBP2.12□□□□□ -2.07
CACNB4-227ENST00000636507 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
CACNB4-227ENST00000636507 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
CACNB4-227ENST00000636507 LYSTQ99698 3801 aa2.11□□□□□ -2.07
CACNB4-227ENST00000636507 RYR1P21817 5038 aa2.11□□□□□ -2.07
CACNB4-227ENST00000636507 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
CACNB4-227ENST00000636507 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
CACNB4-227ENST00000636507 FLGP20930 4061 aaPredicted RBP2.09□□□□□ -2.07
CACNB4-227ENST00000636507 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.08
CACNB4-227ENST00000636507 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.08
CACNB4-227ENST00000636507 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
CACNB4-227ENST00000636507 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
CACNB4-227ENST00000636507 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
CACNB4-227ENST00000636507 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
CACNB4-227ENST00000636507 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
CACNB4-227ENST00000636507 PCLOQ9Y6V0 5065 aa2.04□□□□□ -2.08
CACNB4-227ENST00000636507 LRP1Q07954 4544 aaKnown RBP2.03□□□□□ -2.08
CACNB4-227ENST00000636507 KRTAP4-8A0A0G2JLE6 195 aa2.03□□□□□ -2.08
CACNB4-227ENST00000636507 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
CACNB4-227ENST00000636507 KRTAP9-2Q9BYQ4 174 aa2.02□□□□□ -2.09
CACNB4-227ENST00000636507 ABCA13Q86UQ4 5058 aa2□□□□□ -2.09
CACNB4-227ENST00000636507 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
CACNB4-227ENST00000636507 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
CACNB4-227ENST00000636507 CSMD3Q7Z407 3707 aa1.98□□□□□ -2.09
CACNB4-227ENST00000636507 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
CACNB4-227ENST00000636507 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP9-9Q9BYP9 154 aa1.95□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
CACNB4-227ENST00000636507 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP19-1Q8IUB9 90 aa1.92□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP9-7A8MTY7 169 aa1.92□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
CACNB4-227ENST00000636507 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
CACNB4-227ENST00000636507 UBR4Q5T4S7 5183 aa1.89□□□□□ -2.11
CACNB4-227ENST00000636507 LRP2P98164 4655 aa1.89□□□□□ -2.11
CACNB4-227ENST00000636507 MT1EP04732 61 aa1.88□□□□□ -2.11
CACNB4-227ENST00000636507 MT2AP02795 61 aa1.88□□□□□ -2.11
CACNB4-227ENST00000636507 KRTAP4-1Q9BYQ7 146 aa1.88□□□□□ -2.11
CACNB4-227ENST00000636507 MT1XP80297 61 aa1.86□□□□□ -2.11
CACNB4-227ENST00000636507 MT1HP80294 61 aa1.85□□□□□ -2.11
CACNB4-227ENST00000636507 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
CACNB4-227ENST00000636507 HMCN2Q8NDA2 5059 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 515.5 ms