RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 ACYP2P14621 99 aa3.56□□□□□ -1.84
GABRA1-213ENST00000636340 KRTAP13-2Q52LG2 175 aa3.56□□□□□ -1.84
GABRA1-213ENST00000636340 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
GABRA1-213ENST00000636340 LINC00313P59037 77 aa3.55□□□□□ -1.84
GABRA1-213ENST00000636340 VPS13BQ7Z7G8 4022 aa3.55□□□□□ -1.84
GABRA1-213ENST00000636340 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
GABRA1-213ENST00000636340 Q6ZSA8 131 aa3.52□□□□□ -1.85
GABRA1-213ENST00000636340 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
GABRA1-213ENST00000636340 KRTAP1-4P0C5Y4 121 aa3.51□□□□□ -1.85
GABRA1-213ENST00000636340 KRTAP10-1P60331 282 aa3.5□□□□□ -1.85
GABRA1-213ENST00000636340 C7orf65Q6ZTY9 151 aa3.5□□□□□ -1.85
GABRA1-213ENST00000636340 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
GABRA1-213ENST00000636340 SPATA8Q6RVD6 105 aa3.48□□□□□ -1.85
GABRA1-213ENST00000636340 A0A1B0GU69 56 aa3.47□□□□□ -1.85
GABRA1-213ENST00000636340 APOBP04114 4563 aaKnown RBP3.47□□□□□ -1.85
GABRA1-213ENST00000636340 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
GABRA1-213ENST00000636340 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.85
GABRA1-213ENST00000636340 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
GABRA1-213ENST00000636340 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
GABRA1-213ENST00000636340 RYR1P21817 5038 aa3.44□□□□□ -1.86
GABRA1-213ENST00000636340 HSPG2P98160 4391 aa3.44□□□□□ -1.86
GABRA1-213ENST00000636340 FAT1Q14517 4588 aa3.44□□□□□ -1.86
GABRA1-213ENST00000636340 SPINK1P00995 79 aa3.43□□□□□ -1.86
GABRA1-213ENST00000636340 UQCR11O14957 56 aa3.43□□□□□ -1.86
GABRA1-213ENST00000636340 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
GABRA1-213ENST00000636340 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
GABRA1-213ENST00000636340 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.86
GABRA1-213ENST00000636340 RPS29P62273 56 aaKnown RBP3.4□□□□□ -1.87
GABRA1-213ENST00000636340 SMR3BP02814 79 aaPredicted RBP3.39□□□□□ -1.87
GABRA1-213ENST00000636340 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
GABRA1-213ENST00000636340 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
GABRA1-213ENST00000636340 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
GABRA1-213ENST00000636340 HERC2O95714 4834 aa3.36□□□□□ -1.87
GABRA1-213ENST00000636340 A8MUU9 505 aa3.36□□□□□ -1.87
GABRA1-213ENST00000636340 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
GABRA1-213ENST00000636340 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
GABRA1-213ENST00000636340 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.88
GABRA1-213ENST00000636340 H0YAA0 97 aa3.33□□□□□ -1.88
GABRA1-213ENST00000636340 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
GABRA1-213ENST00000636340 LRP1Q07954 4544 aaKnown RBP3.32□□□□□ -1.88
GABRA1-213ENST00000636340 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
GABRA1-213ENST00000636340 C9orf92A6NGG3 77 aa3.32□□□□□ -1.88
GABRA1-213ENST00000636340 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
GABRA1-213ENST00000636340 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
GABRA1-213ENST00000636340 TNXBP22105 4242 aa3.3□□□□□ -1.88
GABRA1-213ENST00000636340 CSAG1Q6PB30 78 aa3.29□□□□□ -1.88
GABRA1-213ENST00000636340 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
GABRA1-213ENST00000636340 Q5VSD8 79 aa3.29□□□□□ -1.88
GABRA1-213ENST00000636340 H1FX-AS1Q4G0G2 97 aa3.28□□□□□ -1.88
GABRA1-213ENST00000636340 A0A1B0GU33 70 aa3.28□□□□□ -1.88
GABRA1-213ENST00000636340 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
GABRA1-213ENST00000636340 HERC1Q15751 4861 aa3.22□□□□□ -1.89
GABRA1-213ENST00000636340 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
GABRA1-213ENST00000636340 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.89
GABRA1-213ENST00000636340 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
GABRA1-213ENST00000636340 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
GABRA1-213ENST00000636340 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
GABRA1-213ENST00000636340 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
GABRA1-213ENST00000636340 K7ERS5 55 aa3.15□□□□□ -1.9
GABRA1-213ENST00000636340 MT1HL1P0DM35 61 aa3.13□□□□□ -1.91
GABRA1-213ENST00000636340 ROMO1P60602 79 aa3.13□□□□□ -1.91
GABRA1-213ENST00000636340 LPAP08519 4548 aa3.13□□□□□ -1.91
GABRA1-213ENST00000636340 CRIPTQ9P021 101 aa3.13□□□□□ -1.91
GABRA1-213ENST00000636340 S4R3F8 94 aa3.12□□□□□ -1.91
GABRA1-213ENST00000636340 P0C880 135 aa3.11□□□□□ -1.91
GABRA1-213ENST00000636340 A0A0D9SG42 100 aa3.09□□□□□ -1.91
GABRA1-213ENST00000636340 LRP2P98164 4655 aa3.09□□□□□ -1.92
GABRA1-213ENST00000636340 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
GABRA1-213ENST00000636340 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
GABRA1-213ENST00000636340 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
GABRA1-213ENST00000636340 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
GABRA1-213ENST00000636340 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
GABRA1-213ENST00000636340 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
GABRA1-213ENST00000636340 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
GABRA1-213ENST00000636340 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.93
GABRA1-213ENST00000636340 MUC17Q685J3 4493 aa3□□□□□ -1.93
GABRA1-213ENST00000636340 M0QZ58 72 aa3□□□□□ -1.93
GABRA1-213ENST00000636340 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
GABRA1-213ENST00000636340 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
GABRA1-213ENST00000636340 MT3P25713 68 aa2.96□□□□□ -1.94
GABRA1-213ENST00000636340 MUC2Q02817 5179 aa2.96□□□□□ -1.94
GABRA1-213ENST00000636340 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
GABRA1-213ENST00000636340 KRTAP4-1Q9BYQ7 146 aa2.89□□□□□ -1.95
GABRA1-213ENST00000636340 R4GN34 69 aa2.88□□□□□ -1.95
GABRA1-213ENST00000636340 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
GABRA1-213ENST00000636340 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
GABRA1-213ENST00000636340 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
GABRA1-213ENST00000636340 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
GABRA1-213ENST00000636340 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
GABRA1-213ENST00000636340 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
GABRA1-213ENST00000636340 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
GABRA1-213ENST00000636340 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
GABRA1-213ENST00000636340 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
GABRA1-213ENST00000636340 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
GABRA1-213ENST00000636340 TNP1P09430 55 aa2.66□□□□□ -1.98
GABRA1-213ENST00000636340 MT1HP80294 61 aa2.66□□□□□ -1.98
GABRA1-213ENST00000636340 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
GABRA1-213ENST00000636340 M0R2T5 61 aa2.64□□□□□ -1.99
GABRA1-213ENST00000636340 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
GABRA1-213ENST00000636340 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms