RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
CIITA-214ENST00000636238 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
CIITA-214ENST00000636238 ATP11AUNQ6ZP68 121 aa3.8□□□□□ -1.8
CIITA-214ENST00000636238 CYP4F30PQ9H0H9 118 aa3.8□□□□□ -1.8
CIITA-214ENST00000636238 H7BZZ5 65 aa3.79□□□□□ -1.8
CIITA-214ENST00000636238 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
CIITA-214ENST00000636238 NDUFC1O43677 76 aa3.77□□□□□ -1.81
CIITA-214ENST00000636238 SPINK7P58062 85 aa3.76□□□□□ -1.81
CIITA-214ENST00000636238 C7orf65Q6ZTY9 151 aa3.76□□□□□ -1.81
CIITA-214ENST00000636238 HRES1P13985 223 aa3.75□□□□□ -1.81
CIITA-214ENST00000636238 MT2AP02795 61 aa3.74□□□□□ -1.81
CIITA-214ENST00000636238 TMEM258P61165 79 aa3.74□□□□□ -1.81
CIITA-214ENST00000636238 FAM236DA0A1B0GTK5 79 aa3.73□□□□□ -1.81
CIITA-214ENST00000636238 FAM236CP0DP71 79 aa3.73□□□□□ -1.81
CIITA-214ENST00000636238 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
CIITA-214ENST00000636238 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
CIITA-214ENST00000636238 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
CIITA-214ENST00000636238 NEBP20929 6669 aa3.72□□□□□ -1.81
CIITA-214ENST00000636238 C4orf26Q17RF5 130 aa3.71□□□□□ -1.82
CIITA-214ENST00000636238 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
CIITA-214ENST00000636238 MT1FP04733 61 aa3.69□□□□□ -1.82
CIITA-214ENST00000636238 ATP5EP56381 51 aaPredicted RBP3.68□□□□□ -1.82
CIITA-214ENST00000636238 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
CIITA-214ENST00000636238 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
CIITA-214ENST00000636238 DMAC1Q96GE9 116 aa3.65□□□□□ -1.83
CIITA-214ENST00000636238 RBM12B-AS1Q9P1G2 102 aa3.64□□□□□ -1.83
CIITA-214ENST00000636238 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
CIITA-214ENST00000636238 ACYP2P14621 99 aa3.63□□□□□ -1.83
CIITA-214ENST00000636238 COA5Q86WW8 74 aa3.63□□□□□ -1.83
CIITA-214ENST00000636238 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
CIITA-214ENST00000636238 A8MUN3 132 aa3.6□□□□□ -1.83
CIITA-214ENST00000636238 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
CIITA-214ENST00000636238 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
CIITA-214ENST00000636238 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
CIITA-214ENST00000636238 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
CIITA-214ENST00000636238 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
CIITA-214ENST00000636238 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
CIITA-214ENST00000636238 S4R3F8 94 aa3.55□□□□□ -1.84
CIITA-214ENST00000636238 LCA10Q71F78 164 aa3.54□□□□□ -1.84
CIITA-214ENST00000636238 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
CIITA-214ENST00000636238 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
CIITA-214ENST00000636238 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
CIITA-214ENST00000636238 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
CIITA-214ENST00000636238 Q1T7F1 81 aa3.47□□□□□ -1.85
CIITA-214ENST00000636238 KMT2DO14686 5537 aa3.47□□□□□ -1.85
CIITA-214ENST00000636238 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
CIITA-214ENST00000636238 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CIITA-214ENST00000636238 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
CIITA-214ENST00000636238 PSPHP1O15172 72 aa3.45□□□□□ -1.86
CIITA-214ENST00000636238 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
CIITA-214ENST00000636238 V9GYY9 64 aa3.44□□□□□ -1.86
CIITA-214ENST00000636238 A0A1B0GU69 56 aa3.42□□□□□ -1.86
CIITA-214ENST00000636238 A6NN06 94 aa3.42□□□□□ -1.86
CIITA-214ENST00000636238 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
CIITA-214ENST00000636238 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
CIITA-214ENST00000636238 SEC61GP60059 68 aa3.4□□□□□ -1.87
CIITA-214ENST00000636238 Q5VV11 94 aa3.4□□□□□ -1.87
CIITA-214ENST00000636238 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
CIITA-214ENST00000636238 P0C880 135 aa3.38□□□□□ -1.87
CIITA-214ENST00000636238 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
CIITA-214ENST00000636238 A0A1B0GU33 70 aa3.34□□□□□ -1.87
CIITA-214ENST00000636238 H0YAA0 97 aa3.34□□□□□ -1.87
CIITA-214ENST00000636238 A6NED7 52 aa3.33□□□□□ -1.88
CIITA-214ENST00000636238 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
CIITA-214ENST00000636238 MT1BP07438 61 aa3.32□□□□□ -1.88
CIITA-214ENST00000636238 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
CIITA-214ENST00000636238 SPRR2GQ9BYE4 73 aa3.31□□□□□ -1.88
CIITA-214ENST00000636238 KRTAP13-4Q3LI77 160 aa3.3□□□□□ -1.88
CIITA-214ENST00000636238 UQCR11O14957 56 aa3.29□□□□□ -1.88
CIITA-214ENST00000636238 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
CIITA-214ENST00000636238 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
CIITA-214ENST00000636238 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
CIITA-214ENST00000636238 A8MU10 97 aa3.28□□□□□ -1.88
CIITA-214ENST00000636238 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
CIITA-214ENST00000636238 M0QZ58 72 aa3.27□□□□□ -1.89
CIITA-214ENST00000636238 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
CIITA-214ENST00000636238 A0A0D9SG42 100 aa3.25□□□□□ -1.89
CIITA-214ENST00000636238 R4GN34 69 aa3.25□□□□□ -1.89
CIITA-214ENST00000636238 LINC01554Q52M75 96 aa3.24□□□□□ -1.89
CIITA-214ENST00000636238 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
CIITA-214ENST00000636238 SPRR2EP22531 72 aa3.23□□□□□ -1.89
CIITA-214ENST00000636238 SPRR2BP35325 72 aa3.23□□□□□ -1.89
CIITA-214ENST00000636238 SPRR2AP35326 72 aa3.23□□□□□ -1.89
CIITA-214ENST00000636238 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
CIITA-214ENST00000636238 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
CIITA-214ENST00000636238 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
CIITA-214ENST00000636238 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
CIITA-214ENST00000636238 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
CIITA-214ENST00000636238 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
CIITA-214ENST00000636238 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
CIITA-214ENST00000636238 SPRR2DP22532 72 aa3.14□□□□□ -1.91
CIITA-214ENST00000636238 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
CIITA-214ENST00000636238 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
CIITA-214ENST00000636238 K7ERS5 55 aa3.11□□□□□ -1.91
CIITA-214ENST00000636238 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
CIITA-214ENST00000636238 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
CIITA-214ENST00000636238 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
CIITA-214ENST00000636238 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
CIITA-214ENST00000636238 MT1XP80297 61 aa3.05□□□□□ -1.92
CIITA-214ENST00000636238 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms