RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 IGHV6-1A0A0B4J1U7 121 aa7.21□□□□□ -1.26
CHRNA1-208ENST00000636168 PRAC1Q96KF2 57 aa7.21□□□□□ -1.26
CHRNA1-208ENST00000636168 RNF213Q63HN8 5207 aa7.19□□□□□ -1.26
CHRNA1-208ENST00000636168 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
CHRNA1-208ENST00000636168 Q5W150 140 aa7.17□□□□□ -1.26
CHRNA1-208ENST00000636168 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
CHRNA1-208ENST00000636168 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.26
CHRNA1-208ENST00000636168 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
CHRNA1-208ENST00000636168 A0A1B0GU69 56 aa7.12□□□□□ -1.27
CHRNA1-208ENST00000636168 UQCR11O14957 56 aa7.1□□□□□ -1.27
CHRNA1-208ENST00000636168 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.28
CHRNA1-208ENST00000636168 MUC2Q02817 5179 aa7.04□□□□□ -1.28
CHRNA1-208ENST00000636168 IGKV2-30P06310 120 aa7.04□□□□□ -1.28
CHRNA1-208ENST00000636168 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
CHRNA1-208ENST00000636168 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
CHRNA1-208ENST00000636168 XP32Q5T750 250 aa6.94□□□□□ -1.3
CHRNA1-208ENST00000636168 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
CHRNA1-208ENST00000636168 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
CHRNA1-208ENST00000636168 IGKV2D-30A0A075B6S6 120 aa6.91□□□□□ -1.3
CHRNA1-208ENST00000636168 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
CHRNA1-208ENST00000636168 A8MUU9 505 aa6.85□□□□□ -1.31
CHRNA1-208ENST00000636168 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
CHRNA1-208ENST00000636168 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
CHRNA1-208ENST00000636168 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
CHRNA1-208ENST00000636168 H0YAA0 97 aa6.77□□□□□ -1.33
CHRNA1-208ENST00000636168 ROMO1P60602 79 aa6.77□□□□□ -1.33
CHRNA1-208ENST00000636168 RPL37P61927 97 aaKnown RBP6.77□□□□□ -1.33
CHRNA1-208ENST00000636168 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
CHRNA1-208ENST00000636168 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
CHRNA1-208ENST00000636168 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
CHRNA1-208ENST00000636168 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
CHRNA1-208ENST00000636168 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
CHRNA1-208ENST00000636168 A0A1B0GU33 70 aa6.66□□□□□ -1.34
CHRNA1-208ENST00000636168 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
CHRNA1-208ENST00000636168 KRTAP19-2Q3LHN2 52 aa6.63□□□□□ -1.35
CHRNA1-208ENST00000636168 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
CHRNA1-208ENST00000636168 P0C880 135 aa6.56□□□□□ -1.36
CHRNA1-208ENST00000636168 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
CHRNA1-208ENST00000636168 K7ERS5 55 aa6.53□□□□□ -1.36
CHRNA1-208ENST00000636168 MT1HP80294 61 aa6.53□□□□□ -1.36
CHRNA1-208ENST00000636168 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
CHRNA1-208ENST00000636168 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
CHRNA1-208ENST00000636168 M0R2T5 61 aa6.44□□□□□ -1.38
CHRNA1-208ENST00000636168 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
CHRNA1-208ENST00000636168 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
CHRNA1-208ENST00000636168 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
CHRNA1-208ENST00000636168 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
CHRNA1-208ENST00000636168 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
CHRNA1-208ENST00000636168 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
CHRNA1-208ENST00000636168 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
CHRNA1-208ENST00000636168 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
CHRNA1-208ENST00000636168 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
CHRNA1-208ENST00000636168 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
CHRNA1-208ENST00000636168 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
CHRNA1-208ENST00000636168 S4R3F8 94 aa6.17□□□□□ -1.42
CHRNA1-208ENST00000636168 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
CHRNA1-208ENST00000636168 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
CHRNA1-208ENST00000636168 A0A0D9SG42 100 aa6.15□□□□□ -1.43
CHRNA1-208ENST00000636168 MT2AP02795 61 aa6.12□□□□□ -1.43
CHRNA1-208ENST00000636168 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
CHRNA1-208ENST00000636168 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
CHRNA1-208ENST00000636168 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
CHRNA1-208ENST00000636168 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
CHRNA1-208ENST00000636168 KRTAP12-1P59990 96 aa6.09□□□□□ -1.44
CHRNA1-208ENST00000636168 MT1FP04733 61 aa6.08□□□□□ -1.44
CHRNA1-208ENST00000636168 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
CHRNA1-208ENST00000636168 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
CHRNA1-208ENST00000636168 M0QZ58 72 aa5.98□□□□□ -1.45
CHRNA1-208ENST00000636168 USH2AO75445 5202 aa5.96□□□□□ -1.46
CHRNA1-208ENST00000636168 LCE2BO14633 110 aa5.95□□□□□ -1.46
CHRNA1-208ENST00000636168 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
CHRNA1-208ENST00000636168 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
CHRNA1-208ENST00000636168 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
CHRNA1-208ENST00000636168 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
CHRNA1-208ENST00000636168 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.5
CHRNA1-208ENST00000636168 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
CHRNA1-208ENST00000636168 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
CHRNA1-208ENST00000636168 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
CHRNA1-208ENST00000636168 R4GN34 69 aa5.62□□□□□ -1.51
CHRNA1-208ENST00000636168 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
CHRNA1-208ENST00000636168 MT1BP07438 61 aa5.61□□□□□ -1.51
CHRNA1-208ENST00000636168 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
CHRNA1-208ENST00000636168 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
CHRNA1-208ENST00000636168 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
CHRNA1-208ENST00000636168 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
CHRNA1-208ENST00000636168 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
CHRNA1-208ENST00000636168 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
CHRNA1-208ENST00000636168 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
CHRNA1-208ENST00000636168 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
CHRNA1-208ENST00000636168 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
CHRNA1-208ENST00000636168 MT1XP80297 61 aa5.3□□□□□ -1.56
CHRNA1-208ENST00000636168 TNP1P09430 55 aa5.29□□□□□ -1.56
CHRNA1-208ENST00000636168 KMT2DO14686 5537 aa5.17□□□□□ -1.58
CHRNA1-208ENST00000636168 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
CHRNA1-208ENST00000636168 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
CHRNA1-208ENST00000636168 INE1O15225 51 aa5.13□□□□□ -1.59
CHRNA1-208ENST00000636168 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CHRNA1-208ENST00000636168 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
CHRNA1-208ENST00000636168 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
CHRNA1-208ENST00000636168 NEBP20929 6669 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms