RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-215	ENST00000635835	FBN3	Q75N90	2809 aa		3.77	□□□□□ -1.81
CACNB4-215	ENST00000635835	FRAS1	Q86XX4	4008 aa		3.76	□□□□□ -1.81
CACNB4-215	ENST00000635835	CSMD3	Q7Z407	3707 aa		3.75	□□□□□ -1.81
CACNB4-215	ENST00000635835	ANK2	Q01484	3957 aa		3.75	□□□□□ -1.81
CACNB4-215	ENST00000635835	COL6A5	A8TX70	2615 aa		3.74	□□□□□ -1.81
CACNB4-215	ENST00000635835	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.7	□□□□□ -1.82
CACNB4-215	ENST00000635835	STAB1	Q9NY15	2570 aa		3.7	□□□□□ -1.82
CACNB4-215	ENST00000635835	TENM3	Q9P273	2699 aa		3.7	□□□□□ -1.82
CACNB4-215	ENST00000635835	KRTAP21-3	Q3LHN1	58 aa		3.7	□□□□□ -1.82
CACNB4-215	ENST00000635835	KRTAP13-2	Q52LG2	175 aa		3.7	□□□□□ -1.82
CACNB4-215	ENST00000635835	PKD1L1	Q8TDX9	2849 aa		3.69	□□□□□ -1.82
CACNB4-215	ENST00000635835	DNAH8	Q96JB1	4490 aa		3.68	□□□□□ -1.82
CACNB4-215	ENST00000635835	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.66	□□□□□ -1.82
CACNB4-215	ENST00000635835	DYNC2H1	Q8NCM8	4307 aa	Known RBP	3.65	□□□□□ -1.82
CACNB4-215	ENST00000635835	DNAH11	Q96DT5	4516 aa		3.65	□□□□□ -1.83
CACNB4-215	ENST00000635835	RPS29	P62273	56 aa	Known RBP	3.64	□□□□□ -1.83
CACNB4-215	ENST00000635835	TG	P01266	2768 aa		3.63	□□□□□ -1.83
CACNB4-215	ENST00000635835		Q5VSD8	79 aa		3.63	□□□□□ -1.83
CACNB4-215	ENST00000635835	NOTCH1	P46531	2555 aa		3.62	□□□□□ -1.83
CACNB4-215	ENST00000635835	COL7A1	Q02388	2944 aa		3.61	□□□□□ -1.83
CACNB4-215	ENST00000635835	DNAH10	Q8IVF4	4471 aa		3.61	□□□□□ -1.83
CACNB4-215	ENST00000635835	NBEAL1	Q6ZS30	2694 aa		3.61	□□□□□ -1.83
CACNB4-215	ENST00000635835	MYCBP2	O75592	4640 aa		3.61	□□□□□ -1.83
CACNB4-215	ENST00000635835	DNAH9	Q9NYC9	4486 aa		3.6	□□□□□ -1.83
CACNB4-215	ENST00000635835	DNAH17	Q9UFH2	4485 aa		3.59	□□□□□ -1.83
CACNB4-215	ENST00000635835	KRTAP4-11	Q9BYQ6	195 aa		3.58	□□□□□ -1.84
CACNB4-215	ENST00000635835	MGAM2	Q2M2H8	2515 aa		3.57	□□□□□ -1.84
CACNB4-215	ENST00000635835	LYST	Q99698	3801 aa		3.55	□□□□□ -1.84
CACNB4-215	ENST00000635835	DNAH7	Q8WXX0	4024 aa		3.54	□□□□□ -1.84
CACNB4-215	ENST00000635835		A0A1B0GVY2	172 aa		3.54	□□□□□ -1.84
CACNB4-215	ENST00000635835	PLEC	Q15149	4684 aa	Known RBP	3.52	□□□□□ -1.85
CACNB4-215	ENST00000635835	STAB2	Q8WWQ8	2551 aa		3.52	□□□□□ -1.85
CACNB4-215	ENST00000635835	KRTAP1-4	P0C5Y4	121 aa		3.51	□□□□□ -1.85
CACNB4-215	ENST00000635835	DNHD1	Q96M86	4753 aa		3.51	□□□□□ -1.85
CACNB4-215	ENST00000635835	STARD9	Q9P2P6	4700 aa		3.48	□□□□□ -1.85
CACNB4-215	ENST00000635835	PRKDC	P78527	4128 aa	Known RBP	3.48	□□□□□ -1.85
CACNB4-215	ENST00000635835	C9orf92	A6NGG3	77 aa		3.48	□□□□□ -1.85
CACNB4-215	ENST00000635835	KRTAP10-2	P60368	255 aa		3.47	□□□□□ -1.85
CACNB4-215	ENST00000635835	HECTD4	Q9Y4D8	3996 aa		3.46	□□□□□ -1.86
CACNB4-215	ENST00000635835	DNAH6	Q9C0G6	4158 aa		3.46	□□□□□ -1.86
CACNB4-215	ENST00000635835	DNAH2	Q9P225	4427 aa		3.45	□□□□□ -1.86
CACNB4-215	ENST00000635835	KMT2A	Q03164	3969 aa		3.45	□□□□□ -1.86
CACNB4-215	ENST00000635835	KRTAP10-1	P60331	282 aa		3.44	□□□□□ -1.86
CACNB4-215	ENST00000635835	DNAH5	Q8TE73	4624 aa		3.37	□□□□□ -1.87
CACNB4-215	ENST00000635835	LCE4A	Q5TA78	99 aa		3.36	□□□□□ -1.87
CACNB4-215	ENST00000635835	TNP1	P09430	55 aa		3.35	□□□□□ -1.87
CACNB4-215	ENST00000635835	KRTAP19-4	Q3LI73	84 aa		3.35	□□□□□ -1.87
CACNB4-215	ENST00000635835	SACS	Q9NZJ4	4579 aa		3.33	□□□□□ -1.88
CACNB4-215	ENST00000635835	KRTAP10-10	P60014	251 aa		3.33	□□□□□ -1.88
CACNB4-215	ENST00000635835	APOB	P04114	4563 aa	Known RBP	3.32	□□□□□ -1.88
CACNB4-215	ENST00000635835	PKD1	P98161	4303 aa		3.31	□□□□□ -1.88
CACNB4-215	ENST00000635835	LCE5A	Q5TCM9	118 aa		3.3	□□□□□ -1.88
CACNB4-215	ENST00000635835	HYDIN	Q4G0P3	5121 aa		3.29	□□□□□ -1.88
CACNB4-215	ENST00000635835	LRP1B	Q9NZR2	4599 aa		3.29	□□□□□ -1.88
CACNB4-215	ENST00000635835	FAT2	Q9NYQ8	4349 aa		3.28	□□□□□ -1.88
CACNB4-215	ENST00000635835	UBR4	Q5T4S7	5183 aa		3.28	□□□□□ -1.88
CACNB4-215	ENST00000635835	KRTAP9-7	A8MTY7	169 aa		3.28	□□□□□ -1.88
CACNB4-215	ENST00000635835	SMR3B	P02814	79 aa	Predicted RBP	3.26	□□□□□ -1.89
CACNB4-215	ENST00000635835	VPS13B	Q7Z7G8	4022 aa		3.25	□□□□□ -1.89
CACNB4-215	ENST00000635835	KRTAP10-4	P60372	401 aa	Predicted RBP	3.23	□□□□□ -1.89
CACNB4-215	ENST00000635835	PCLO	Q9Y6V0	5065 aa		3.22	□□□□□ -1.89
CACNB4-215	ENST00000635835	PKHD1L1	Q86WI1	4243 aa		3.21	□□□□□ -1.9
CACNB4-215	ENST00000635835	DYNC1H1	Q14204	4646 aa	Known RBP	3.18	□□□□□ -1.9
CACNB4-215	ENST00000635835	KRTAP9-3	Q9BYQ3	159 aa		3.18	□□□□□ -1.9
CACNB4-215	ENST00000635835	PKHD1	P08F94	4074 aa		3.17	□□□□□ -1.9
CACNB4-215	ENST00000635835	LRP1	Q07954	4544 aa	Known RBP	3.16	□□□□□ -1.9
CACNB4-215	ENST00000635835	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.13	□□□□□ -1.91
CACNB4-215	ENST00000635835	BIRC6	Q9NR09	4857 aa		3.12	□□□□□ -1.91
CACNB4-215	ENST00000635835	RYR2	Q92736	4967 aa		3.11	□□□□□ -1.91
CACNB4-215	ENST00000635835	RYR3	Q15413	4870 aa		3.1	□□□□□ -1.91
CACNB4-215	ENST00000635835	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.1	□□□□□ -1.91
CACNB4-215	ENST00000635835	FAT1	Q14517	4588 aa		3.09	□□□□□ -1.91
CACNB4-215	ENST00000635835	FAT3	Q8TDW7	4589 aa		3.09	□□□□□ -1.91
CACNB4-215	ENST00000635835	KIAA1109	Q2LD37	5005 aa		3.08	□□□□□ -1.92
CACNB4-215	ENST00000635835	KRTAP2-2	Q9BYT5	123 aa		3.07	□□□□□ -1.92
CACNB4-215	ENST00000635835	TNXB	P22105	4242 aa		3.07	□□□□□ -1.92
CACNB4-215	ENST00000635835	HSPG2	P98160	4391 aa		3.06	□□□□□ -1.92
CACNB4-215	ENST00000635835	KRTAP10-12	P60413	245 aa		3.05	□□□□□ -1.92
CACNB4-215	ENST00000635835	KRTAP8-1	Q8IUC2	63 aa		3.04	□□□□□ -1.92
CACNB4-215	ENST00000635835	FLG	P20930	4061 aa	Predicted RBP	3.03	□□□□□ -1.92
CACNB4-215	ENST00000635835	KRTAP5-9	P26371	169 aa		3.03	□□□□□ -1.92
CACNB4-215	ENST00000635835	EPPK1	P58107	5090 aa	Known RBP	3.02	□□□□□ -1.93
CACNB4-215	ENST00000635835	LCE3A	Q5TA76	89 aa		3.01	□□□□□ -1.93
CACNB4-215	ENST00000635835	MT1HL1	P0DM35	61 aa		3	□□□□□ -1.93
CACNB4-215	ENST00000635835	RYR1	P21817	5038 aa		2.98	□□□□□ -1.93
CACNB4-215	ENST00000635835	KRTAP2-3	P0C7H8	128 aa		2.96	□□□□□ -1.94
CACNB4-215	ENST00000635835	KRTAP2-4	Q9BYR9	128 aa		2.96	□□□□□ -1.94
CACNB4-215	ENST00000635835	KRTAP2-1	Q9BYU5	128 aa		2.96	□□□□□ -1.94
CACNB4-215	ENST00000635835	KRTAP10-5	P60370	271 aa		2.91	□□□□□ -1.94
CACNB4-215	ENST00000635835	HMCN1	Q96RW7	5635 aa		2.88	□□□□□ -1.95
CACNB4-215	ENST00000635835	KRTAP12-3	P60328	96 aa		2.86	□□□□□ -1.95
CACNB4-215	ENST00000635835	HERC2	O95714	4834 aa		2.85	□□□□□ -1.95
CACNB4-215	ENST00000635835	MUC2	Q02817	5179 aa		2.85	□□□□□ -1.95
CACNB4-215	ENST00000635835	KRTAP6-3	Q3LI67	103 aa		2.84	□□□□□ -1.96
CACNB4-215	ENST00000635835		M0R2T5	61 aa		2.82	□□□□□ -1.96
CACNB4-215	ENST00000635835	ABCA13	Q86UQ4	5058 aa		2.82	□□□□□ -1.96
CACNB4-215	ENST00000635835	LCE1A	Q5T7P2	110 aa		2.81	□□□□□ -1.96
CACNB4-215	ENST00000635835	LPA	P08519	4548 aa		2.78	□□□□□ -1.96
CACNB4-215	ENST00000635835	LRP2	P98164	4655 aa		2.78	□□□□□ -1.96
CACNB4-215	ENST00000635835	MUC17	Q685J3	4493 aa		2.77	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms