RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
CDKL5-209ENST00000635828 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
CDKL5-209ENST00000635828 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
CDKL5-209ENST00000635828 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
CDKL5-209ENST00000635828 USH2AO75445 5202 aa4.17□□□□□ -1.74
CDKL5-209ENST00000635828 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
CDKL5-209ENST00000635828 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
CDKL5-209ENST00000635828 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
CDKL5-209ENST00000635828 NDUFC1O43677 76 aa4.13□□□□□ -1.75
CDKL5-209ENST00000635828 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
CDKL5-209ENST00000635828 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
CDKL5-209ENST00000635828 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
CDKL5-209ENST00000635828 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
CDKL5-209ENST00000635828 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
CDKL5-209ENST00000635828 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
CDKL5-209ENST00000635828 CYSTM1Q9H1C7 97 aa4.11□□□□□ -1.75
CDKL5-209ENST00000635828 MP68P56378 58 aa4.1□□□□□ -1.75
CDKL5-209ENST00000635828 LCA10Q71F78 164 aa4.1□□□□□ -1.75
CDKL5-209ENST00000635828 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
CDKL5-209ENST00000635828 MT1FP04733 61 aa4.07□□□□□ -1.76
CDKL5-209ENST00000635828 A8MUN3 132 aa4.07□□□□□ -1.76
CDKL5-209ENST00000635828 MT2AP02795 61 aa4.07□□□□□ -1.76
CDKL5-209ENST00000635828 S4R3F8 94 aa4.04□□□□□ -1.76
CDKL5-209ENST00000635828 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
CDKL5-209ENST00000635828 H7BZZ5 65 aa4.03□□□□□ -1.76
CDKL5-209ENST00000635828 H3BPC8 53 aa4.01□□□□□ -1.77
CDKL5-209ENST00000635828 KRTAP10-10P60014 251 aa4□□□□□ -1.77
CDKL5-209ENST00000635828 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
CDKL5-209ENST00000635828 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
CDKL5-209ENST00000635828 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
CDKL5-209ENST00000635828 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
CDKL5-209ENST00000635828 LINC01554Q52M75 96 aa3.96□□□□□ -1.77
CDKL5-209ENST00000635828 LCE2BO14633 110 aa3.96□□□□□ -1.78
CDKL5-209ENST00000635828 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
CDKL5-209ENST00000635828 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-209ENST00000635828 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
CDKL5-209ENST00000635828 ACYP2P14621 99 aa3.88□□□□□ -1.79
CDKL5-209ENST00000635828 P0C880 135 aa3.88□□□□□ -1.79
CDKL5-209ENST00000635828 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
CDKL5-209ENST00000635828 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
CDKL5-209ENST00000635828 A8MU10 97 aa3.86□□□□□ -1.79
CDKL5-209ENST00000635828 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
CDKL5-209ENST00000635828 Q1T7F1 81 aa3.85□□□□□ -1.79
CDKL5-209ENST00000635828 COA5Q86WW8 74 aa3.84□□□□□ -1.79
CDKL5-209ENST00000635828 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
CDKL5-209ENST00000635828 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
CDKL5-209ENST00000635828 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
CDKL5-209ENST00000635828 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
CDKL5-209ENST00000635828 Q5VV11 94 aa3.81□□□□□ -1.8
CDKL5-209ENST00000635828 K7ERS5 55 aa3.79□□□□□ -1.8
CDKL5-209ENST00000635828 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
CDKL5-209ENST00000635828 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
CDKL5-209ENST00000635828 H0YAA0 97 aa3.78□□□□□ -1.8
CDKL5-209ENST00000635828 MT1BP07438 61 aa3.78□□□□□ -1.8
CDKL5-209ENST00000635828 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
CDKL5-209ENST00000635828 A0A1B0GU69 56 aa3.74□□□□□ -1.81
CDKL5-209ENST00000635828 A6NN06 94 aa3.74□□□□□ -1.81
CDKL5-209ENST00000635828 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
CDKL5-209ENST00000635828 KMT2DO14686 5537 aa3.74□□□□□ -1.81
CDKL5-209ENST00000635828 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
CDKL5-209ENST00000635828 M0QZ58 72 aa3.72□□□□□ -1.81
CDKL5-209ENST00000635828 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
CDKL5-209ENST00000635828 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
CDKL5-209ENST00000635828 R4GN34 69 aa3.71□□□□□ -1.81
CDKL5-209ENST00000635828 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
CDKL5-209ENST00000635828 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
CDKL5-209ENST00000635828 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
CDKL5-209ENST00000635828 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
CDKL5-209ENST00000635828 UQCR11O14957 56 aa3.66□□□□□ -1.82
CDKL5-209ENST00000635828 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
CDKL5-209ENST00000635828 A0A0D9SG42 100 aa3.61□□□□□ -1.83
CDKL5-209ENST00000635828 ROMO1P60602 79 aa3.6□□□□□ -1.83
CDKL5-209ENST00000635828 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
CDKL5-209ENST00000635828 MT1XP80297 61 aa3.6□□□□□ -1.83
CDKL5-209ENST00000635828 A0A1B0GU33 70 aa3.59□□□□□ -1.84
CDKL5-209ENST00000635828 KRTAP10-5P60370 271 aa3.59□□□□□ -1.84
CDKL5-209ENST00000635828 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
CDKL5-209ENST00000635828 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
CDKL5-209ENST00000635828 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
CDKL5-209ENST00000635828 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
CDKL5-209ENST00000635828 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
CDKL5-209ENST00000635828 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
CDKL5-209ENST00000635828 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
CDKL5-209ENST00000635828 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
CDKL5-209ENST00000635828 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
CDKL5-209ENST00000635828 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
CDKL5-209ENST00000635828 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
CDKL5-209ENST00000635828 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
CDKL5-209ENST00000635828 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
CDKL5-209ENST00000635828 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
CDKL5-209ENST00000635828 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
CDKL5-209ENST00000635828 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
CDKL5-209ENST00000635828 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
CDKL5-209ENST00000635828 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
CDKL5-209ENST00000635828 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
CDKL5-209ENST00000635828 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
CDKL5-209ENST00000635828 NEBP20929 6669 aa3.25□□□□□ -1.89
CDKL5-209ENST00000635828 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
CDKL5-209ENST00000635828 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
CDKL5-209ENST00000635828 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms