RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 FAT1Q14517 4588 aa5.61□□□□□ -1.51
PSPC1-207ENST00000635251 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
PSPC1-207ENST00000635251 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
PSPC1-207ENST00000635251 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
PSPC1-207ENST00000635251 Q5VSD8 79 aa5.57□□□□□ -1.52
PSPC1-207ENST00000635251 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
PSPC1-207ENST00000635251 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
PSPC1-207ENST00000635251 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
PSPC1-207ENST00000635251 K7ERS5 55 aa5.55□□□□□ -1.52
PSPC1-207ENST00000635251 ROMO1P60602 79 aa5.53□□□□□ -1.52
PSPC1-207ENST00000635251 XP32Q5T750 250 aa5.52□□□□□ -1.53
PSPC1-207ENST00000635251 S4R3F8 94 aa5.49□□□□□ -1.53
PSPC1-207ENST00000635251 KRTAP17-1Q9BYP8 105 aa5.48□□□□□ -1.53
PSPC1-207ENST00000635251 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
PSPC1-207ENST00000635251 KRTAP10-6P60371 365 aaPredicted RBP5.46□□□□□ -1.54
PSPC1-207ENST00000635251 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
PSPC1-207ENST00000635251 A0A0D9SG42 100 aa5.44□□□□□ -1.54
PSPC1-207ENST00000635251 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
PSPC1-207ENST00000635251 LCE2BO14633 110 aa5.42□□□□□ -1.54
PSPC1-207ENST00000635251 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
PSPC1-207ENST00000635251 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
PSPC1-207ENST00000635251 TNXBP22105 4242 aa5.4□□□□□ -1.54
PSPC1-207ENST00000635251 P0C880 135 aa5.38□□□□□ -1.55
PSPC1-207ENST00000635251 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
PSPC1-207ENST00000635251 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
PSPC1-207ENST00000635251 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
PSPC1-207ENST00000635251 HERC2O95714 4834 aa5.36□□□□□ -1.55
PSPC1-207ENST00000635251 RYR1P21817 5038 aa5.33□□□□□ -1.56
PSPC1-207ENST00000635251 HSPG2P98160 4391 aa5.33□□□□□ -1.56
PSPC1-207ENST00000635251 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
PSPC1-207ENST00000635251 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
PSPC1-207ENST00000635251 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
PSPC1-207ENST00000635251 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
PSPC1-207ENST00000635251 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
PSPC1-207ENST00000635251 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
PSPC1-207ENST00000635251 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
PSPC1-207ENST00000635251 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
PSPC1-207ENST00000635251 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
PSPC1-207ENST00000635251 M0QZ58 72 aa5.21□□□□□ -1.58
PSPC1-207ENST00000635251 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
PSPC1-207ENST00000635251 ABCA13Q86UQ4 5058 aa5.19□□□□□ -1.58
PSPC1-207ENST00000635251 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
PSPC1-207ENST00000635251 LPAP08519 4548 aa5.16□□□□□ -1.58
PSPC1-207ENST00000635251 LRP2P98164 4655 aa5.13□□□□□ -1.59
PSPC1-207ENST00000635251 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
PSPC1-207ENST00000635251 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
PSPC1-207ENST00000635251 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
PSPC1-207ENST00000635251 R4GN34 69 aa5.11□□□□□ -1.59
PSPC1-207ENST00000635251 HERC1Q15751 4861 aa5.05□□□□□ -1.6
PSPC1-207ENST00000635251 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
PSPC1-207ENST00000635251 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
PSPC1-207ENST00000635251 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
PSPC1-207ENST00000635251 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
PSPC1-207ENST00000635251 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
PSPC1-207ENST00000635251 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
PSPC1-207ENST00000635251 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
PSPC1-207ENST00000635251 UBR4Q5T4S7 5183 aa4.83□□□□□ -1.64
PSPC1-207ENST00000635251 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
PSPC1-207ENST00000635251 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
PSPC1-207ENST00000635251 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
PSPC1-207ENST00000635251 MUC2Q02817 5179 aa4.67□□□□□ -1.66
PSPC1-207ENST00000635251 TNP1P09430 55 aa4.67□□□□□ -1.66
PSPC1-207ENST00000635251 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
PSPC1-207ENST00000635251 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
PSPC1-207ENST00000635251 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
PSPC1-207ENST00000635251 M0R2T5 61 aa4.6□□□□□ -1.67
PSPC1-207ENST00000635251 SPRR2GQ9BYE4 73 aa4.55□□□□□ -1.68
PSPC1-207ENST00000635251 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
PSPC1-207ENST00000635251 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
PSPC1-207ENST00000635251 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
PSPC1-207ENST00000635251 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
PSPC1-207ENST00000635251 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
PSPC1-207ENST00000635251 MT1HP80294 61 aa4.49□□□□□ -1.69
PSPC1-207ENST00000635251 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
PSPC1-207ENST00000635251 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
PSPC1-207ENST00000635251 MT1FP04733 61 aa4.44□□□□□ -1.7
PSPC1-207ENST00000635251 MT2AP02795 61 aa4.43□□□□□ -1.7
PSPC1-207ENST00000635251 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
PSPC1-207ENST00000635251 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
PSPC1-207ENST00000635251 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
PSPC1-207ENST00000635251 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
PSPC1-207ENST00000635251 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
PSPC1-207ENST00000635251 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.72
PSPC1-207ENST00000635251 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
PSPC1-207ENST00000635251 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
PSPC1-207ENST00000635251 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
PSPC1-207ENST00000635251 MT1BP07438 61 aa4.29□□□□□ -1.72
PSPC1-207ENST00000635251 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
PSPC1-207ENST00000635251 MT1XP80297 61 aa4.26□□□□□ -1.73
PSPC1-207ENST00000635251 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
PSPC1-207ENST00000635251 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
PSPC1-207ENST00000635251 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
PSPC1-207ENST00000635251 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
PSPC1-207ENST00000635251 INE1O15225 51 aa4.18□□□□□ -1.74
PSPC1-207ENST00000635251 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-207ENST00000635251 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
PSPC1-207ENST00000635251 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
PSPC1-207ENST00000635251 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
PSPC1-207ENST00000635251 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
PSPC1-207ENST00000635251 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms