RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 K7ERS5 55 aa8.61□□□□□ -1.03
NRXN1-229ENST00000628515 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
NRXN1-229ENST00000628515 HSPG2P98160 4391 aa8.57□□□□□ -1.04
NRXN1-229ENST00000628515 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
NRXN1-229ENST00000628515 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
NRXN1-229ENST00000628515 A0A0D9SG42 100 aa8.55□□□□□ -1.04
NRXN1-229ENST00000628515 Q5VSD8 79 aa8.55□□□□□ -1.04
NRXN1-229ENST00000628515 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.04
NRXN1-229ENST00000628515 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
NRXN1-229ENST00000628515 RYR1P21817 5038 aa8.49□□□□□ -1.05
NRXN1-229ENST00000628515 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
NRXN1-229ENST00000628515 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
NRXN1-229ENST00000628515 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
NRXN1-229ENST00000628515 NDUFAF8A1L188 74 aa8.4□□□□□ -1.07
NRXN1-229ENST00000628515 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
NRXN1-229ENST00000628515 KRTAP13-4Q3LI77 160 aa8.36□□□□□ -1.07
NRXN1-229ENST00000628515 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
NRXN1-229ENST00000628515 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
NRXN1-229ENST00000628515 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
NRXN1-229ENST00000628515 TNXBP22105 4242 aa8.29□□□□□ -1.08
NRXN1-229ENST00000628515 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
NRXN1-229ENST00000628515 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
NRXN1-229ENST00000628515 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
NRXN1-229ENST00000628515 S4R3F8 94 aa8.25□□□□□ -1.09
NRXN1-229ENST00000628515 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
NRXN1-229ENST00000628515 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
NRXN1-229ENST00000628515 A0A0A0MQY5 61 aa8.19□□□□□ -1.1
NRXN1-229ENST00000628515 LPAP08519 4548 aa8.18□□□□□ -1.1
NRXN1-229ENST00000628515 LRP2P98164 4655 aa8.13□□□□□ -1.11
NRXN1-229ENST00000628515 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
NRXN1-229ENST00000628515 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
NRXN1-229ENST00000628515 HERC2O95714 4834 aa8.11□□□□□ -1.11
NRXN1-229ENST00000628515 XP32Q5T750 250 aa8.1□□□□□ -1.11
NRXN1-229ENST00000628515 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
NRXN1-229ENST00000628515 J3QL48 77 aa7.99□□□□□ -1.13
NRXN1-229ENST00000628515 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
NRXN1-229ENST00000628515 HERC1Q15751 4861 aa7.93□□□□□ -1.14
NRXN1-229ENST00000628515 MUC2Q02817 5179 aa7.93□□□□□ -1.14
NRXN1-229ENST00000628515 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
NRXN1-229ENST00000628515 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
NRXN1-229ENST00000628515 M0QZ58 72 aa7.83□□□□□ -1.16
NRXN1-229ENST00000628515 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
NRXN1-229ENST00000628515 R4GN34 69 aa7.76□□□□□ -1.17
NRXN1-229ENST00000628515 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
NRXN1-229ENST00000628515 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
NRXN1-229ENST00000628515 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
NRXN1-229ENST00000628515 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
NRXN1-229ENST00000628515 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
NRXN1-229ENST00000628515 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
NRXN1-229ENST00000628515 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
NRXN1-229ENST00000628515 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
NRXN1-229ENST00000628515 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
NRXN1-229ENST00000628515 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
NRXN1-229ENST00000628515 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
NRXN1-229ENST00000628515 M0R2T5 61 aa7.13□□□□□ -1.27
NRXN1-229ENST00000628515 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
NRXN1-229ENST00000628515 TNP1P09430 55 aa7.08□□□□□ -1.28
NRXN1-229ENST00000628515 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
NRXN1-229ENST00000628515 LCE2CQ5TA81 110 aa6.95□□□□□ -1.3
NRXN1-229ENST00000628515 MT1HP80294 61 aa6.85□□□□□ -1.31
NRXN1-229ENST00000628515 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
NRXN1-229ENST00000628515 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
NRXN1-229ENST00000628515 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
NRXN1-229ENST00000628515 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
NRXN1-229ENST00000628515 USH2AO75445 5202 aa6.69□□□□□ -1.34
NRXN1-229ENST00000628515 MT1FP04733 61 aa6.68□□□□□ -1.34
NRXN1-229ENST00000628515 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
NRXN1-229ENST00000628515 MT2AP02795 61 aa6.65□□□□□ -1.35
NRXN1-229ENST00000628515 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
NRXN1-229ENST00000628515 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
NRXN1-229ENST00000628515 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.36
NRXN1-229ENST00000628515 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
NRXN1-229ENST00000628515 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
NRXN1-229ENST00000628515 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
NRXN1-229ENST00000628515 KMT2DO14686 5537 aa6.33□□□□□ -1.4
NRXN1-229ENST00000628515 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
NRXN1-229ENST00000628515 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
NRXN1-229ENST00000628515 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
NRXN1-229ENST00000628515 MT1BP07438 61 aa6.27□□□□□ -1.41
NRXN1-229ENST00000628515 MT1XP80297 61 aa6.27□□□□□ -1.41
NRXN1-229ENST00000628515 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
NRXN1-229ENST00000628515 LCE2BO14633 110 aa6.24□□□□□ -1.41
NRXN1-229ENST00000628515 INE1O15225 51 aa6.23□□□□□ -1.41
NRXN1-229ENST00000628515 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
NRXN1-229ENST00000628515 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
NRXN1-229ENST00000628515 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
NRXN1-229ENST00000628515 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
NRXN1-229ENST00000628515 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
NRXN1-229ENST00000628515 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
NRXN1-229ENST00000628515 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
NRXN1-229ENST00000628515 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
NRXN1-229ENST00000628515 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
NRXN1-229ENST00000628515 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
NRXN1-229ENST00000628515 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
NRXN1-229ENST00000628515 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
NRXN1-229ENST00000628515 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
NRXN1-229ENST00000628515 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
NRXN1-229ENST00000628515 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
NRXN1-229ENST00000628515 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
NRXN1-229ENST00000628515 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 233 ms