RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 RYR1P21817 5038 aa13.87□□□□□ -0.19
NRXN1-228ENST00000628364 MT1HL1P0DM35 61 aa13.86□□□□□ -0.19
NRXN1-228ENST00000628364 KRTAP17-1Q9BYP8 105 aa13.85□□□□□ -0.19
NRXN1-228ENST00000628364 DMBT1Q9UGM3 2413 aaPredicted RBP13.81□□□□□ -0.2
NRXN1-228ENST00000628364 KRTAP3-3Q9BYR6 98 aa13.8□□□□□ -0.2
NRXN1-228ENST00000628364 S4R3F8 94 aa13.75□□□□□ -0.21
NRXN1-228ENST00000628364 RYR3Q15413 4870 aa13.75□□□□□ -0.21
NRXN1-228ENST00000628364 K7ERS5 55 aa13.65□□□□□ -0.22
NRXN1-228ENST00000628364 KRTAP10-6P60371 365 aaPredicted RBP13.64□□□□□ -0.23
NRXN1-228ENST00000628364 TPRXLQ17RH7 258 aa13.62□□□□□ -0.23
NRXN1-228ENST00000628364 CSAG1Q6PB30 78 aa13.59□□□□□ -0.23
NRXN1-228ENST00000628364 KRTAP3-2Q9BYR7 98 aa13.56□□□□□ -0.24
NRXN1-228ENST00000628364 MYCBP2O75592 4640 aa13.56□□□□□ -0.24
NRXN1-228ENST00000628364 KIAA1109Q2LD37 5005 aa13.56□□□□□ -0.24
NRXN1-228ENST00000628364 LINC01554Q52M75 96 aa13.51□□□□□ -0.25
NRXN1-228ENST00000628364 KRTAP13-4Q3LI77 160 aa13.41□□□□□ -0.26
NRXN1-228ENST00000628364 P0C880 135 aa13.35□□□□□ -0.27
NRXN1-228ENST00000628364 KRTAP25-1Q3LHN0 102 aa13.31□□□□□ -0.28
NRXN1-228ENST00000628364 A0A0D9SG42 100 aa13.3□□□□□ -0.28
NRXN1-228ENST00000628364 ROMO1P60602 79 aa13.25□□□□□ -0.29
NRXN1-228ENST00000628364 EPPK1P58107 5090 aaKnown RBP13.23□□□□□ -0.29
NRXN1-228ENST00000628364 LRP2P98164 4655 aa13.22□□□□□ -0.29
NRXN1-228ENST00000628364 KRTAP4-5Q9BYR2 181 aa13.21□□□□□ -0.3
NRXN1-228ENST00000628364 LPAP08519 4548 aa13.18□□□□□ -0.3
NRXN1-228ENST00000628364 SEC61BP60468 96 aaKnown RBP13.14□□□□□ -0.31
NRXN1-228ENST00000628364 M0QZ58 72 aa13.1□□□□□ -0.31
NRXN1-228ENST00000628364 KRTAP12-2P59991 146 aa13□□□□□ -0.33
NRXN1-228ENST00000628364 CRIPTQ9P021 101 aa13□□□□□ -0.33
NRXN1-228ENST00000628364 ABCA13Q86UQ4 5058 aa12.98□□□□□ -0.33
NRXN1-228ENST00000628364 J3QL48 77 aa12.97□□□□□ -0.33
NRXN1-228ENST00000628364 KRTAP12-1P59990 96 aa12.96□□□□□ -0.33
NRXN1-228ENST00000628364 SPINT4Q6UDR6 99 aa12.91□□□□□ -0.34
NRXN1-228ENST00000628364 KRTAP4-1Q9BYQ7 146 aa12.78□□□□□ -0.36
NRXN1-228ENST00000628364 MUC17Q685J3 4493 aa12.77□□□□□ -0.36
NRXN1-228ENST00000628364 R4GN34 69 aa12.74□□□□□ -0.37
NRXN1-228ENST00000628364 KRTAP19-2Q3LHN2 52 aa12.6□□□□□ -0.39
NRXN1-228ENST00000628364 C10orf95Q9H7T3 257 aa12.6□□□□□ -0.39
NRXN1-228ENST00000628364 HERC2O95714 4834 aa12.58□□□□□ -0.4
NRXN1-228ENST00000628364 LORP23490 312 aaPredicted RBP12.49□□□□□ -0.41
NRXN1-228ENST00000628364 BIRC6Q9NR09 4857 aa12.32□□□□□ -0.44
NRXN1-228ENST00000628364 FLGP20930 4061 aaPredicted RBP12.14□□□□□ -0.47
NRXN1-228ENST00000628364 CAMK2N1Q7Z7J9 78 aa12.08□□□□□ -0.48
NRXN1-228ENST00000628364 KRTAP15-1Q3LI76 137 aa12.07□□□□□ -0.48
NRXN1-228ENST00000628364 MUC2Q02817 5179 aa12□□□□□ -0.49
NRXN1-228ENST00000628364 H3BS24 57 aa11.95□□□□□ -0.5
NRXN1-228ENST00000628364 HMCN2Q8NDA2 5059 aa11.92□□□□□ -0.5
NRXN1-228ENST00000628364 HERC1Q15751 4861 aa11.9□□□□□ -0.5
NRXN1-228ENST00000628364 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
NRXN1-228ENST00000628364 PP632Q6XCG6 107 aa11.89□□□□□ -0.51
NRXN1-228ENST00000628364 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
NRXN1-228ENST00000628364 PLAC4Q8WY50 150 aa11.69□□□□□ -0.54
NRXN1-228ENST00000628364 SPRR2GQ9BYE4 73 aa11.68□□□□□ -0.54
NRXN1-228ENST00000628364 TNP1P09430 55 aa11.65□□□□□ -0.54
NRXN1-228ENST00000628364 NDUFAF8A1L188 74 aa11.64□□□□□ -0.55
NRXN1-228ENST00000628364 M0R2T5 61 aa11.64□□□□□ -0.55
NRXN1-228ENST00000628364 MT1HP80294 61 aa11.59□□□□□ -0.55
NRXN1-228ENST00000628364 KRTAP23-1A1A580 65 aa11.58□□□□□ -0.56
NRXN1-228ENST00000628364 KRTAP19-1Q8IUB9 90 aa11.55□□□□□ -0.56
NRXN1-228ENST00000628364 FAT4Q6V0I7 4981 aa11.45□□□□□ -0.58
NRXN1-228ENST00000628364 MT2AP02795 61 aa11.38□□□□□ -0.59
NRXN1-228ENST00000628364 KRTAP10-10P60014 251 aa11.37□□□□□ -0.59
NRXN1-228ENST00000628364 MT1FP04733 61 aa11.35□□□□□ -0.59
NRXN1-228ENST00000628364 RNF213Q63HN8 5207 aa11.34□□□□□ -0.59
NRXN1-228ENST00000628364 KRTAP9-8Q9BYQ0 159 aa11.32□□□□□ -0.6
NRXN1-228ENST00000628364 UBR4Q5T4S7 5183 aa11.22□□□□□ -0.61
NRXN1-228ENST00000628364 KRTAP19-8Q3LI54 63 aa11.19□□□□□ -0.62
NRXN1-228ENST00000628364 LUZP6Q538Z0 58 aa11.14□□□□□ -0.63
NRXN1-228ENST00000628364 MT1BP07438 61 aa10.97□□□□□ -0.65
NRXN1-228ENST00000628364 LCE3AQ5TA76 89 aa10.96□□□□□ -0.66
NRXN1-228ENST00000628364 SPRR5A0A1B0GTR4 108 aa10.94□□□□□ -0.66
NRXN1-228ENST00000628364 KRTAP10-5P60370 271 aa10.88□□□□□ -0.67
NRXN1-228ENST00000628364 KRTAP9-3Q9BYQ3 159 aa10.86□□□□□ -0.67
NRXN1-228ENST00000628364 MT1XP80297 61 aa10.85□□□□□ -0.67
NRXN1-228ENST00000628364 KRTAP8-1Q8IUC2 63 aa10.78□□□□□ -0.68
NRXN1-228ENST00000628364 KRTAP10-12P60413 245 aa10.64□□□□□ -0.71
NRXN1-228ENST00000628364 PRO2289Q9P1D8 64 aa10.62□□□□□ -0.71
NRXN1-228ENST00000628364 KRTAP12-3P60328 96 aa10.49□□□□□ -0.73
NRXN1-228ENST00000628364 KRTAP10-7P60409 375 aaPredicted RBP10.49□□□□□ -0.73
NRXN1-228ENST00000628364 A0A0A0MQY5 61 aa10.45□□□□□ -0.74
NRXN1-228ENST00000628364 LCE2BO14633 110 aa10.39□□□□□ -0.75
NRXN1-228ENST00000628364 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
NRXN1-228ENST00000628364 KRTAP19-5Q3LI72 72 aa10.06□□□□□ -0.8
NRXN1-228ENST00000628364 LCE3CQ5T5A8 94 aa9.88□□□□□ -0.83
NRXN1-228ENST00000628364 USH2AO75445 5202 aa9.83□□□□□ -0.84
NRXN1-228ENST00000628364 KRTAP4-8A0A0G2JLE6 195 aa9.83□□□□□ -0.84
NRXN1-228ENST00000628364 KRTAP4-8Q9BYQ9 185 aa9.83□□□□□ -0.84
NRXN1-228ENST00000628364 KRTAP19-7Q3SYF9 63 aa9.67□□□□□ -0.86
NRXN1-228ENST00000628364 KRTAP19-4Q3LI73 84 aa9.64□□□□□ -0.87
NRXN1-228ENST00000628364 KMT2DO14686 5537 aa9.61□□□□□ -0.87
NRXN1-228ENST00000628364 INE1O15225 51 aa9.56□□□□□ -0.88
NRXN1-228ENST00000628364 KRTAP19-6Q3LI70 58 aa9.48□□□□□ -0.89
NRXN1-228ENST00000628364 SSPOA2VEC9 5147 aa9.43□□□□□ -0.9
NRXN1-228ENST00000628364 MT1EP04732 61 aa9.43□□□□□ -0.9
NRXN1-228ENST00000628364 MT1LQ93083 61 aa9.4□□□□□ -0.9
NRXN1-228ENST00000628364 KRTAP9-6A8MVA2 160 aa9.4□□□□□ -0.91
NRXN1-228ENST00000628364 KRTAP4-7Q9BYR0 210 aa9.3□□□□□ -0.92
NRXN1-228ENST00000628364 KRTAP2-3P0C7H8 128 aa9.13□□□□□ -0.95
NRXN1-228ENST00000628364 KRTAP2-4Q9BYR9 128 aa9.13□□□□□ -0.95
NRXN1-228ENST00000628364 KRTAP2-1Q9BYU5 128 aa9.13□□□□□ -0.95
NRXN1-228ENST00000628364 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms