RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 IMUPQ9GZP8 106 aa4□□□□□ -1.77
CHD2-213ENST00000628118 ATOX1O00244 68 aa3.99□□□□□ -1.77
CHD2-213ENST00000628118 A0A087WVE0 104 aa3.98□□□□□ -1.77
CHD2-213ENST00000628118 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
CHD2-213ENST00000628118 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
CHD2-213ENST00000628118 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
CHD2-213ENST00000628118 H0Y9P7 68 aa3.94□□□□□ -1.78
CHD2-213ENST00000628118 SCGB1A1P11684 91 aa3.94□□□□□ -1.78
CHD2-213ENST00000628118 MP68P56378 58 aa3.94□□□□□ -1.78
CHD2-213ENST00000628118 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
CHD2-213ENST00000628118 H3BPC8 53 aa3.93□□□□□ -1.78
CHD2-213ENST00000628118 C4orf26Q17RF5 130 aa3.93□□□□□ -1.78
CHD2-213ENST00000628118 C5orf47Q569G3 176 aa3.93□□□□□ -1.78
CHD2-213ENST00000628118 MT-ATP8P03928 68 aa3.91□□□□□ -1.78
CHD2-213ENST00000628118 SMIM20Q8N5G0 67 aa3.91□□□□□ -1.78
CHD2-213ENST00000628118 C1orf64Q8NEQ6 169 aa3.91□□□□□ -1.78
CHD2-213ENST00000628118 LINC00208Q96KT6 92 aa3.89□□□□□ -1.79
CHD2-213ENST00000628118 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
CHD2-213ENST00000628118 A8MUN3 132 aa3.87□□□□□ -1.79
CHD2-213ENST00000628118 FAM236AA0A1B0GUQ0 79 aa3.86□□□□□ -1.79
CHD2-213ENST00000628118 FAM236BA0A1B0GV22 79 aa3.86□□□□□ -1.79
CHD2-213ENST00000628118 S4R3F8 94 aa3.86□□□□□ -1.79
CHD2-213ENST00000628118 TRAV7A0A075B6U4 112 aa3.85□□□□□ -1.79
CHD2-213ENST00000628118 MT2AP02795 61 aa3.84□□□□□ -1.79
CHD2-213ENST00000628118 CSAG1Q6PB30 78 aa3.83□□□□□ -1.8
CHD2-213ENST00000628118 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
CHD2-213ENST00000628118 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
CHD2-213ENST00000628118 MT1FP04733 61 aa3.81□□□□□ -1.8
CHD2-213ENST00000628118 LCA10Q71F78 164 aa3.81□□□□□ -1.8
CHD2-213ENST00000628118 NDUFC1O43677 76 aa3.78□□□□□ -1.8
CHD2-213ENST00000628118 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
CHD2-213ENST00000628118 DMAC1Q96GE9 116 aa3.77□□□□□ -1.81
CHD2-213ENST00000628118 H0YAA0 97 aa3.73□□□□□ -1.81
CHD2-213ENST00000628118 ACYP2P14621 99 aa3.73□□□□□ -1.81
CHD2-213ENST00000628118 CRCT1Q9UGL9 99 aa3.73□□□□□ -1.81
CHD2-213ENST00000628118 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
CHD2-213ENST00000628118 SPANXA2-OT1Q8N9U9 137 aa3.72□□□□□ -1.81
CHD2-213ENST00000628118 C20orf197Q8N268 126 aa3.71□□□□□ -1.82
CHD2-213ENST00000628118 SNURFQ9Y675 71 aa3.71□□□□□ -1.82
CHD2-213ENST00000628118 COX7CP15954 63 aa3.7□□□□□ -1.82
CHD2-213ENST00000628118 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
CHD2-213ENST00000628118 SPTSSBQ8NFR3 76 aa3.68□□□□□ -1.82
CHD2-213ENST00000628118 USH2AO75445 5202 aa3.65□□□□□ -1.82
CHD2-213ENST00000628118 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
CHD2-213ENST00000628118 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
CHD2-213ENST00000628118 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
CHD2-213ENST00000628118 ANAPC13Q9BS18 74 aa3.64□□□□□ -1.83
CHD2-213ENST00000628118 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
CHD2-213ENST00000628118 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
CHD2-213ENST00000628118 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
CHD2-213ENST00000628118 H7BZZ5 65 aa3.59□□□□□ -1.83
CHD2-213ENST00000628118 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.83
CHD2-213ENST00000628118 Q5VV11 94 aa3.59□□□□□ -1.83
CHD2-213ENST00000628118 COA5Q86WW8 74 aa3.56□□□□□ -1.84
CHD2-213ENST00000628118 R4GN34 69 aa3.55□□□□□ -1.84
CHD2-213ENST00000628118 MT1BP07438 61 aa3.54□□□□□ -1.84
CHD2-213ENST00000628118 P0C880 135 aa3.54□□□□□ -1.84
CHD2-213ENST00000628118 CYSTM1Q9H1C7 97 aa3.54□□□□□ -1.84
CHD2-213ENST00000628118 ATP5EP56381 51 aaPredicted RBP3.53□□□□□ -1.84
CHD2-213ENST00000628118 CCDC179H3BU77 68 aa3.52□□□□□ -1.85
CHD2-213ENST00000628118 SEC61GP60059 68 aa3.52□□□□□ -1.85
CHD2-213ENST00000628118 M0QZ58 72 aa3.51□□□□□ -1.85
CHD2-213ENST00000628118 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
CHD2-213ENST00000628118 A6NN06 94 aa3.48□□□□□ -1.85
CHD2-213ENST00000628118 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
CHD2-213ENST00000628118 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
CHD2-213ENST00000628118 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
CHD2-213ENST00000628118 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
CHD2-213ENST00000628118 TMEM258P61165 79 aa3.46□□□□□ -1.86
CHD2-213ENST00000628118 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
CHD2-213ENST00000628118 LINC01554Q52M75 96 aa3.42□□□□□ -1.86
CHD2-213ENST00000628118 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
CHD2-213ENST00000628118 A0A1B0GU69 56 aa3.4□□□□□ -1.87
CHD2-213ENST00000628118 A0A1B0GU33 70 aa3.38□□□□□ -1.87
CHD2-213ENST00000628118 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
CHD2-213ENST00000628118 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
CHD2-213ENST00000628118 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
CHD2-213ENST00000628118 MT1XP80297 61 aa3.36□□□□□ -1.87
CHD2-213ENST00000628118 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
CHD2-213ENST00000628118 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
CHD2-213ENST00000628118 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
CHD2-213ENST00000628118 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CHD2-213ENST00000628118 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
CHD2-213ENST00000628118 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
CHD2-213ENST00000628118 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
CHD2-213ENST00000628118 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
CHD2-213ENST00000628118 V9GYY9 64 aa3.29□□□□□ -1.88
CHD2-213ENST00000628118 A0A0D9SG42 100 aa3.28□□□□□ -1.88
CHD2-213ENST00000628118 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
CHD2-213ENST00000628118 MT3P25713 68 aa3.26□□□□□ -1.89
CHD2-213ENST00000628118 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
CHD2-213ENST00000628118 UQCR11O14957 56 aa3.25□□□□□ -1.89
CHD2-213ENST00000628118 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
CHD2-213ENST00000628118 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
CHD2-213ENST00000628118 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
CHD2-213ENST00000628118 Q1T7F1 81 aa3.23□□□□□ -1.89
CHD2-213ENST00000628118 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CHD2-213ENST00000628118 A8MU10 97 aa3.2□□□□□ -1.9
CHD2-213ENST00000628118 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
CHD2-213ENST00000628118 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms