RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TNXBP22105 4242 aa5.89□□□□□ -1.47
VARS2-213ENST00000625423 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
VARS2-213ENST00000625423 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
VARS2-213ENST00000625423 HSPG2P98160 4391 aa5.86□□□□□ -1.47
VARS2-213ENST00000625423 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
VARS2-213ENST00000625423 KIAA1109Q2LD37 5005 aa5.85□□□□□ -1.47
VARS2-213ENST00000625423 A0A0D9SG42 100 aa5.84□□□□□ -1.48
VARS2-213ENST00000625423 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
VARS2-213ENST00000625423 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
VARS2-213ENST00000625423 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
VARS2-213ENST00000625423 XP32Q5T750 250 aa5.79□□□□□ -1.48
VARS2-213ENST00000625423 KRTAP3-3Q9BYR6 98 aa5.79□□□□□ -1.48
VARS2-213ENST00000625423 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
VARS2-213ENST00000625423 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
VARS2-213ENST00000625423 RYR1P21817 5038 aa5.74□□□□□ -1.49
VARS2-213ENST00000625423 K7ERS5 55 aa5.73□□□□□ -1.49
VARS2-213ENST00000625423 S4R3F8 94 aa5.73□□□□□ -1.49
VARS2-213ENST00000625423 HERC2O95714 4834 aa5.72□□□□□ -1.49
VARS2-213ENST00000625423 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.5
VARS2-213ENST00000625423 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
VARS2-213ENST00000625423 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.5
VARS2-213ENST00000625423 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
VARS2-213ENST00000625423 J3QL48 77 aa5.69□□□□□ -1.5
VARS2-213ENST00000625423 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
VARS2-213ENST00000625423 LPAP08519 4548 aa5.66□□□□□ -1.5
VARS2-213ENST00000625423 P0C880 135 aa5.65□□□□□ -1.5
VARS2-213ENST00000625423 ROMO1P60602 79 aa5.62□□□□□ -1.51
VARS2-213ENST00000625423 LRP2P98164 4655 aa5.61□□□□□ -1.51
VARS2-213ENST00000625423 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
VARS2-213ENST00000625423 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
VARS2-213ENST00000625423 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
VARS2-213ENST00000625423 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
VARS2-213ENST00000625423 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
VARS2-213ENST00000625423 PCLOQ9Y6V0 5065 aa5.47□□□□□ -1.53
VARS2-213ENST00000625423 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
VARS2-213ENST00000625423 M0QZ58 72 aa5.43□□□□□ -1.54
VARS2-213ENST00000625423 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
VARS2-213ENST00000625423 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
VARS2-213ENST00000625423 R4GN34 69 aa5.32□□□□□ -1.56
VARS2-213ENST00000625423 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
VARS2-213ENST00000625423 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
VARS2-213ENST00000625423 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
VARS2-213ENST00000625423 HERC1Q15751 4861 aa5.27□□□□□ -1.57
VARS2-213ENST00000625423 MUC2Q02817 5179 aa5.25□□□□□ -1.57
VARS2-213ENST00000625423 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
VARS2-213ENST00000625423 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
VARS2-213ENST00000625423 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
VARS2-213ENST00000625423 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
VARS2-213ENST00000625423 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
VARS2-213ENST00000625423 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
VARS2-213ENST00000625423 M0R2T5 61 aa5.06□□□□□ -1.6
VARS2-213ENST00000625423 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
VARS2-213ENST00000625423 HMCN2Q8NDA2 5059 aa5.03□□□□□ -1.6
VARS2-213ENST00000625423 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
VARS2-213ENST00000625423 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
VARS2-213ENST00000625423 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
VARS2-213ENST00000625423 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
VARS2-213ENST00000625423 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
VARS2-213ENST00000625423 TNP1P09430 55 aa4.86□□□□□ -1.63
VARS2-213ENST00000625423 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
VARS2-213ENST00000625423 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
VARS2-213ENST00000625423 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
VARS2-213ENST00000625423 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
VARS2-213ENST00000625423 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
VARS2-213ENST00000625423 MT1HP80294 61 aa4.74□□□□□ -1.65
VARS2-213ENST00000625423 MT1FP04733 61 aa4.68□□□□□ -1.66
VARS2-213ENST00000625423 MT2AP02795 61 aa4.68□□□□□ -1.66
VARS2-213ENST00000625423 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
VARS2-213ENST00000625423 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
VARS2-213ENST00000625423 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
VARS2-213ENST00000625423 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
VARS2-213ENST00000625423 USH2AO75445 5202 aa4.54□□□□□ -1.68
VARS2-213ENST00000625423 MT1BP07438 61 aa4.53□□□□□ -1.68
VARS2-213ENST00000625423 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
VARS2-213ENST00000625423 MT1XP80297 61 aa4.5□□□□□ -1.69
VARS2-213ENST00000625423 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
VARS2-213ENST00000625423 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
VARS2-213ENST00000625423 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
VARS2-213ENST00000625423 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
VARS2-213ENST00000625423 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
VARS2-213ENST00000625423 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
VARS2-213ENST00000625423 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
VARS2-213ENST00000625423 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
VARS2-213ENST00000625423 KMT2DO14686 5537 aa4.34□□□□□ -1.71
VARS2-213ENST00000625423 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
VARS2-213ENST00000625423 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
VARS2-213ENST00000625423 LCE2BO14633 110 aa4.27□□□□□ -1.73
VARS2-213ENST00000625423 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
VARS2-213ENST00000625423 KRTAP4-8A0A0G2JLE6 195 aa4.13□□□□□ -1.75
VARS2-213ENST00000625423 KRTAP4-8Q9BYQ9 185 aa4.13□□□□□ -1.75
VARS2-213ENST00000625423 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
VARS2-213ENST00000625423 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
VARS2-213ENST00000625423 INE1O15225 51 aa4.06□□□□□ -1.76
VARS2-213ENST00000625423 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
VARS2-213ENST00000625423 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
VARS2-213ENST00000625423 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
VARS2-213ENST00000625423 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
VARS2-213ENST00000625423 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
VARS2-213ENST00000625423 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
VARS2-213ENST00000625423 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms