RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
ATRX-212ENST00000623706 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
ATRX-212ENST00000623706 LRP2P98164 4655 aa1.63□□□□□ -2.15
ATRX-212ENST00000623706 DSPP15924 2871 aaKnown RBP1.63□□□□□ -2.15
ATRX-212ENST00000623706 KRTAP7-1Q8IUC3 87 aa1.63□□□□□ -2.15
ATRX-212ENST00000623706 DNAH11Q96DT5 4516 aa1.62□□□□□ -2.15
ATRX-212ENST00000623706 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
ATRX-212ENST00000623706 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
ATRX-212ENST00000623706 SETD2Q9BYW2 2564 aaPredicted RBP1.6□□□□□ -2.15
ATRX-212ENST00000623706 MT3P25713 68 aa1.6□□□□□ -2.15
ATRX-212ENST00000623706 MGAM2Q2M2H8 2515 aa1.6□□□□□ -2.15
ATRX-212ENST00000623706 USP9YO00507 2555 aaPredicted RBP1.6□□□□□ -2.15
ATRX-212ENST00000623706 TENM4Q6N022 2769 aa1.6□□□□□ -2.15
ATRX-212ENST00000623706 SACSQ9NZJ4 4579 aa1.59□□□□□ -2.15
ATRX-212ENST00000623706 KMT2DO14686 5537 aa1.59□□□□□ -2.16
ATRX-212ENST00000623706 KRTAP3-1Q9BYR8 98 aa1.59□□□□□ -2.16
ATRX-212ENST00000623706 PIEZO2Q9H5I5 2752 aa1.59□□□□□ -2.16
ATRX-212ENST00000623706 KRTAP13-3Q3SY46 172 aa1.58□□□□□ -2.16
ATRX-212ENST00000623706 PDZD2O15018 2839 aa1.58□□□□□ -2.16
ATRX-212ENST00000623706 TACC2O95359 2948 aa1.58□□□□□ -2.16
ATRX-212ENST00000623706 DNAH8Q96JB1 4490 aa1.58□□□□□ -2.16
ATRX-212ENST00000623706 TNXBP22105 4242 aa1.57□□□□□ -2.16
ATRX-212ENST00000623706 HSPG2P98160 4391 aa1.57□□□□□ -2.16
ATRX-212ENST00000623706 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
ATRX-212ENST00000623706 CRYBG3Q68DQ2 2970 aa1.56□□□□□ -2.16
ATRX-212ENST00000623706 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
ATRX-212ENST00000623706 STAB1Q9NY15 2570 aa1.55□□□□□ -2.16
ATRX-212ENST00000623706 NOTCH1P46531 2555 aa1.55□□□□□ -2.16
ATRX-212ENST00000623706 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
ATRX-212ENST00000623706 STARD9Q9P2P6 4700 aa1.55□□□□□ -2.16
ATRX-212ENST00000623706 MXRA5Q9NR99 2828 aa1.55□□□□□ -2.16
ATRX-212ENST00000623706 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
ATRX-212ENST00000623706 ANKRD17O75179 2603 aaKnown RBP1.54□□□□□ -2.16
ATRX-212ENST00000623706 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
ATRX-212ENST00000623706 IGSF10Q6WRI0 2623 aa1.53□□□□□ -2.16
ATRX-212ENST00000623706 KRTAP10-12P60413 245 aa1.53□□□□□ -2.16
ATRX-212ENST00000623706 DNAH10Q8IVF4 4471 aa1.53□□□□□ -2.16
ATRX-212ENST00000623706 PLECQ15149 4684 aaKnown RBP1.53□□□□□ -2.16
ATRX-212ENST00000623706 NSD1Q96L73 2696 aaPredicted RBP1.52□□□□□ -2.17
ATRX-212ENST00000623706 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
ATRX-212ENST00000623706 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
ATRX-212ENST00000623706 TENM2Q9NT68 2774 aa1.49□□□□□ -2.17
ATRX-212ENST00000623706 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
ATRX-212ENST00000623706 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
ATRX-212ENST00000623706 TENM3Q9P273 2699 aa1.48□□□□□ -2.17
ATRX-212ENST00000623706 LRP1BQ9NZR2 4599 aa1.48□□□□□ -2.17
ATRX-212ENST00000623706 LCE3AQ5TA76 89 aa1.47□□□□□ -2.17
ATRX-212ENST00000623706 HRNRQ86YZ3 2850 aaPredicted RBP1.47□□□□□ -2.17
ATRX-212ENST00000623706 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
ATRX-212ENST00000623706 UTP20O75691 2785 aaKnown RBP1.47□□□□□ -2.17
ATRX-212ENST00000623706 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
ATRX-212ENST00000623706 KRTAP9-9Q9BYP9 154 aa1.46□□□□□ -2.18
ATRX-212ENST00000623706 KRTAP9-4Q9BYQ2 154 aa1.46□□□□□ -2.18
ATRX-212ENST00000623706 MAST4O15021 2626 aa1.46□□□□□ -2.18
ATRX-212ENST00000623706 ATRQ13535 2644 aa1.45□□□□□ -2.18
ATRX-212ENST00000623706 FAT1Q14517 4588 aa1.45□□□□□ -2.18
ATRX-212ENST00000623706 LCE3BQ5TA77 95 aa1.45□□□□□ -2.18
ATRX-212ENST00000623706 USP24Q9UPU5 2620 aa1.44□□□□□ -2.18
ATRX-212ENST00000623706 CEP295Q9C0D2 2601 aa1.44□□□□□ -2.18
ATRX-212ENST00000623706 PKD1L1Q8TDX9 2849 aa1.44□□□□□ -2.18
ATRX-212ENST00000623706 KRTAP4-5Q9BYR2 181 aa1.43□□□□□ -2.18
ATRX-212ENST00000623706 ZANQ9Y493 2812 aa1.42□□□□□ -2.18
ATRX-212ENST00000623706 MUC17Q685J3 4493 aa1.41□□□□□ -2.18
ATRX-212ENST00000623706 NBEAL1Q6ZS30 2694 aa1.41□□□□□ -2.18
ATRX-212ENST00000623706 CENPEQ02224 2701 aa1.4□□□□□ -2.19
ATRX-212ENST00000623706 NBEAL2Q6ZNJ1 2754 aa1.39□□□□□ -2.19
ATRX-212ENST00000623706 ITPR2Q14571 2701 aa1.38□□□□□ -2.19
ATRX-212ENST00000623706 KRTAP1-4P0C5Y4 121 aa1.38□□□□□ -2.19
ATRX-212ENST00000623706 TEX15Q9BXT5 2789 aa1.38□□□□□ -2.19
ATRX-212ENST00000623706 LCE3CQ5T5A8 94 aa1.38□□□□□ -2.19
ATRX-212ENST00000623706 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
ATRX-212ENST00000623706 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
ATRX-212ENST00000623706 COL6A5A8TX70 2615 aa1.38□□□□□ -2.19
ATRX-212ENST00000623706 KRTAP1-3Q8IUG1 177 aa1.37□□□□□ -2.19
ATRX-212ENST00000623706 KRTAP1-1Q07627 177 aa1.36□□□□□ -2.19
ATRX-212ENST00000623706 GCN1Q92616 2671 aaKnown RBP1.36□□□□□ -2.19
ATRX-212ENST00000623706 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
ATRX-212ENST00000623706 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
ATRX-212ENST00000623706 LCE4AQ5TA78 99 aa1.36□□□□□ -2.19
ATRX-212ENST00000623706 SRRM2Q9UQ35 2752 aaKnown RBP1.36□□□□□ -2.19
ATRX-212ENST00000623706 TEP1Q99973 2627 aaKnown RBP1.35□□□□□ -2.19
ATRX-212ENST00000623706 LRP1Q07954 4544 aaKnown RBP1.34□□□□□ -2.2
ATRX-212ENST00000623706 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.2
ATRX-212ENST00000623706 SPRR2GQ9BYE4 73 aa1.33□□□□□ -2.2
ATRX-212ENST00000623706 HIVEP1P15822 2718 aa1.33□□□□□ -2.2
ATRX-212ENST00000623706 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
ATRX-212ENST00000623706 SETXQ7Z333 2677 aaKnown RBP1.32□□□□□ -2.2
ATRX-212ENST00000623706 FLNCQ14315 2725 aa1.31□□□□□ -2.2
ATRX-212ENST00000623706 KRTAP4-12Q9BQ66 201 aa1.3□□□□□ -2.2
ATRX-212ENST00000623706 KRTAP4-8Q9BYQ9 185 aa1.3□□□□□ -2.2
ATRX-212ENST00000623706 ITPR3Q14573 2671 aa1.29□□□□□ -2.2
ATRX-212ENST00000623706 KRTAP19-1Q8IUB9 90 aa1.29□□□□□ -2.2
ATRX-212ENST00000623706 ANKRD11Q6UB99 2663 aaPredicted RBP1.29□□□□□ -2.2
ATRX-212ENST00000623706 MUC5ACP98088 5654 aa1.28□□□□□ -2.21
ATRX-212ENST00000623706 FLNBO75369 2602 aaKnown RBP1.27□□□□□ -2.21
ATRX-212ENST00000623706 PRM1P04553 51 aa1.25□□□□□ -2.21
ATRX-212ENST00000623706 LPAP08519 4548 aa1.25□□□□□ -2.21
ATRX-212ENST00000623706 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
ATRX-212ENST00000623706 KRTAP9-6A0A140TA67 174 aa1.24□□□□□ -2.21
ATRX-212ENST00000623706 KRTAP9-7A8MTY7 169 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms