RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
PCDHB4-202ENST00000623478 IMUPQ9GZP8 106 aa9.58□□□□□ -0.88
PCDHB4-202ENST00000623478 SYNE2Q8WXH0 6885 aaKnown RBP9.58□□□□□ -0.88
PCDHB4-202ENST00000623478 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
PCDHB4-202ENST00000623478 UQCRQO14949 82 aa9.46□□□□□ -0.9
PCDHB4-202ENST00000623478 H0Y9P7 68 aa9.44□□□□□ -0.9
PCDHB4-202ENST00000623478 OCR1Q9BZK8 76 aa9.42□□□□□ -0.9
PCDHB4-202ENST00000623478 SPRR2GQ9BYE4 73 aa9.41□□□□□ -0.9
PCDHB4-202ENST00000623478 ATOX1O00244 68 aa9.4□□□□□ -0.9
PCDHB4-202ENST00000623478 MT1BP07438 61 aa9.4□□□□□ -0.9
PCDHB4-202ENST00000623478 KLKP1Q107X0 134 aa9.38□□□□□ -0.91
PCDHB4-202ENST00000623478 Q5VV11 94 aa9.36□□□□□ -0.91
PCDHB4-202ENST00000623478 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
PCDHB4-202ENST00000623478 SCGB1A1P11684 91 aa9.29□□□□□ -0.92
PCDHB4-202ENST00000623478 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
PCDHB4-202ENST00000623478 A6NN06 94 aa9.26□□□□□ -0.93
PCDHB4-202ENST00000623478 NDUFC1O43677 76 aa9.25□□□□□ -0.93
PCDHB4-202ENST00000623478 TRAV7A0A075B6U4 112 aa9.23□□□□□ -0.93
PCDHB4-202ENST00000623478 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
PCDHB4-202ENST00000623478 A8MUN3 132 aa9.22□□□□□ -0.93
PCDHB4-202ENST00000623478 MP68P56378 58 aa9.21□□□□□ -0.94
PCDHB4-202ENST00000623478 KRTAP6-3Q3LI67 103 aa9.21□□□□□ -0.94
PCDHB4-202ENST00000623478 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
PCDHB4-202ENST00000623478 H0YAA0 97 aa9.16□□□□□ -0.94
PCDHB4-202ENST00000623478 H3BPC8 53 aa9.16□□□□□ -0.94
PCDHB4-202ENST00000623478 KRTAP10-5P60370 271 aa9.16□□□□□ -0.94
PCDHB4-202ENST00000623478 SERP2Q8N6R1 65 aa9.13□□□□□ -0.95
PCDHB4-202ENST00000623478 ADM2Q7Z4H4 148 aa9.11□□□□□ -0.95
PCDHB4-202ENST00000623478 COX7CP15954 63 aa9.02□□□□□ -0.97
PCDHB4-202ENST00000623478 NEBP20929 6669 aa9□□□□□ -0.97
PCDHB4-202ENST00000623478 MUC12Q9UKN1 5478 aa8.99□□□□□ -0.97
PCDHB4-202ENST00000623478 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
PCDHB4-202ENST00000623478 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
PCDHB4-202ENST00000623478 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
PCDHB4-202ENST00000623478 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
PCDHB4-202ENST00000623478 P0C880 135 aa8.93□□□□□ -0.98
PCDHB4-202ENST00000623478 KRTAP4-8Q9BYQ9 185 aa8.87□□□□□ -0.99
PCDHB4-202ENST00000623478 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
PCDHB4-202ENST00000623478 R4GN34 69 aa8.86□□□□□ -0.99
PCDHB4-202ENST00000623478 CCDC179H3BU77 68 aa8.82□□□□□ -1
PCDHB4-202ENST00000623478 MT1XP80297 61 aa8.82□□□□□ -1
PCDHB4-202ENST00000623478 KMT2DO14686 5537 aa8.82□□□□□ -1
PCDHB4-202ENST00000623478 M0QZ58 72 aa8.81□□□□□ -1
PCDHB4-202ENST00000623478 KRTAP5-9P26371 169 aa8.81□□□□□ -1
PCDHB4-202ENST00000623478 SPANXA2-OT1Q8N9U9 137 aa8.8□□□□□ -1
PCDHB4-202ENST00000623478 PLAC4Q8WY50 150 aa8.8□□□□□ -1
PCDHB4-202ENST00000623478 H7BZZ5 65 aa8.79□□□□□ -1
PCDHB4-202ENST00000623478 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
PCDHB4-202ENST00000623478 MDN1Q9NU22 5596 aa8.77□□□□□ -1.01
PCDHB4-202ENST00000623478 ACYP2P14621 99 aa8.74□□□□□ -1.01
PCDHB4-202ENST00000623478 LINC01554Q52M75 96 aa8.7□□□□□ -1.02
PCDHB4-202ENST00000623478 SPTSSBQ8NFR3 76 aa8.61□□□□□ -1.03
PCDHB4-202ENST00000623478 CHKB-CPT1BH3BT56 60 aa8.6□□□□□ -1.03
PCDHB4-202ENST00000623478 SPRR2FQ96RM1 72 aa8.57□□□□□ -1.04
PCDHB4-202ENST00000623478 KRTAP12-2P59991 146 aa8.56□□□□□ -1.04
PCDHB4-202ENST00000623478 KRTAP20-1Q3LI63 56 aa8.55□□□□□ -1.04
PCDHB4-202ENST00000623478 KRTAP4-12Q9BQ66 201 aa8.53□□□□□ -1.04
PCDHB4-202ENST00000623478 KRTAP8-1Q8IUC2 63 aa8.52□□□□□ -1.05
PCDHB4-202ENST00000623478 COA5Q86WW8 74 aa8.5□□□□□ -1.05
PCDHB4-202ENST00000623478 PCP4P48539 62 aa8.49□□□□□ -1.05
PCDHB4-202ENST00000623478 TMEM258P61165 79 aa8.48□□□□□ -1.05
PCDHB4-202ENST00000623478 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.06
PCDHB4-202ENST00000623478 LCE3BQ5TA77 95 aa8.46□□□□□ -1.06
PCDHB4-202ENST00000623478 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
PCDHB4-202ENST00000623478 SPRR2EP22531 72 aa8.44□□□□□ -1.06
PCDHB4-202ENST00000623478 SPRR2BP35325 72 aa8.44□□□□□ -1.06
PCDHB4-202ENST00000623478 SPRR2AP35326 72 aa8.44□□□□□ -1.06
PCDHB4-202ENST00000623478 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
PCDHB4-202ENST00000623478 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
PCDHB4-202ENST00000623478 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
PCDHB4-202ENST00000623478 LCE1AQ5T7P2 110 aa8.33□□□□□ -1.08
PCDHB4-202ENST00000623478 KRTAP2-3P0C7H8 128 aa8.3□□□□□ -1.08
PCDHB4-202ENST00000623478 KRTAP2-4Q9BYR9 128 aa8.3□□□□□ -1.08
PCDHB4-202ENST00000623478 KRTAP9-9Q9BYP9 154 aa8.29□□□□□ -1.08
PCDHB4-202ENST00000623478 KRTAP9-4Q9BYQ2 154 aa8.29□□□□□ -1.08
PCDHB4-202ENST00000623478 SERP1Q9Y6X1 66 aa8.22□□□□□ -1.09
PCDHB4-202ENST00000623478 SPRR2DP22532 72 aa8.15□□□□□ -1.1
PCDHB4-202ENST00000623478 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
PCDHB4-202ENST00000623478 SEC61GP60059 68 aa8.1□□□□□ -1.11
PCDHB4-202ENST00000623478 A0A0D9SG42 100 aa8.08□□□□□ -1.12
PCDHB4-202ENST00000623478 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
PCDHB4-202ENST00000623478 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
PCDHB4-202ENST00000623478 RPS28P62857 69 aaKnown RBP8.04□□□□□ -1.12
PCDHB4-202ENST00000623478 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
PCDHB4-202ENST00000623478 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
PCDHB4-202ENST00000623478 A0A1B0GU33 70 aa8□□□□□ -1.13
PCDHB4-202ENST00000623478 A0A1B0GU69 56 aa7.99□□□□□ -1.13
PCDHB4-202ENST00000623478 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
PCDHB4-202ENST00000623478 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
PCDHB4-202ENST00000623478 Q1T7F1 81 aa7.92□□□□□ -1.14
PCDHB4-202ENST00000623478 LCE1DQ5T752 114 aa7.91□□□□□ -1.14
PCDHB4-202ENST00000623478 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
PCDHB4-202ENST00000623478 KRTAP19-7Q3SYF9 63 aa7.88□□□□□ -1.15
PCDHB4-202ENST00000623478 PRR15LQ9BU68 103 aa7.88□□□□□ -1.15
PCDHB4-202ENST00000623478 V9GYY9 64 aa7.85□□□□□ -1.15
PCDHB4-202ENST00000623478 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
PCDHB4-202ENST00000623478 MT1EP04732 61 aa7.81□□□□□ -1.16
PCDHB4-202ENST00000623478 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
PCDHB4-202ENST00000623478 A8MU10 97 aa7.77□□□□□ -1.17
PCDHB4-202ENST00000623478 LCE5AQ5TCM9 118 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms