RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 RYR1P21817 5038 aa6.98□□□□□ -1.29
PSME3-217ENST00000622892 H1FX-AS1Q4G0G2 97 aa6.96□□□□□ -1.3
PSME3-217ENST00000622892 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
PSME3-217ENST00000622892 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
PSME3-217ENST00000622892 KRTAP4-5Q9BYR2 181 aa6.92□□□□□ -1.3
PSME3-217ENST00000622892 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
PSME3-217ENST00000622892 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
PSME3-217ENST00000622892 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
PSME3-217ENST00000622892 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
PSME3-217ENST00000622892 K7ERS5 55 aa6.81□□□□□ -1.32
PSME3-217ENST00000622892 ROMO1P60602 79 aa6.81□□□□□ -1.32
PSME3-217ENST00000622892 A0A0D9SG42 100 aa6.8□□□□□ -1.32
PSME3-217ENST00000622892 TNXBP22105 4242 aa6.76□□□□□ -1.33
PSME3-217ENST00000622892 ABCA13Q86UQ4 5058 aa6.76□□□□□ -1.33
PSME3-217ENST00000622892 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
PSME3-217ENST00000622892 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
PSME3-217ENST00000622892 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
PSME3-217ENST00000622892 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
PSME3-217ENST00000622892 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
PSME3-217ENST00000622892 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
PSME3-217ENST00000622892 HERC2O95714 4834 aa6.69□□□□□ -1.34
PSME3-217ENST00000622892 P0C880 135 aa6.65□□□□□ -1.34
PSME3-217ENST00000622892 LPAP08519 4548 aa6.65□□□□□ -1.34
PSME3-217ENST00000622892 J3QL48 77 aa6.65□□□□□ -1.34
PSME3-217ENST00000622892 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
PSME3-217ENST00000622892 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
PSME3-217ENST00000622892 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
PSME3-217ENST00000622892 BIRC6Q9NR09 4857 aa6.63□□□□□ -1.35
PSME3-217ENST00000622892 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
PSME3-217ENST00000622892 S4R3F8 94 aa6.58□□□□□ -1.36
PSME3-217ENST00000622892 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
PSME3-217ENST00000622892 LRP2P98164 4655 aa6.57□□□□□ -1.36
PSME3-217ENST00000622892 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
PSME3-217ENST00000622892 XP32Q5T750 250 aa6.52□□□□□ -1.37
PSME3-217ENST00000622892 HERC1Q15751 4861 aa6.51□□□□□ -1.37
PSME3-217ENST00000622892 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
PSME3-217ENST00000622892 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
PSME3-217ENST00000622892 MUC2Q02817 5179 aa6.4□□□□□ -1.39
PSME3-217ENST00000622892 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
PSME3-217ENST00000622892 M0QZ58 72 aa6.26□□□□□ -1.41
PSME3-217ENST00000622892 RNF213Q63HN8 5207 aa6.21□□□□□ -1.42
PSME3-217ENST00000622892 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
PSME3-217ENST00000622892 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
PSME3-217ENST00000622892 R4GN34 69 aa6.18□□□□□ -1.42
PSME3-217ENST00000622892 UBR4Q5T4S7 5183 aa6.17□□□□□ -1.42
PSME3-217ENST00000622892 SEC61BP60468 96 aaKnown RBP6.16□□□□□ -1.42
PSME3-217ENST00000622892 A0A0A0MQY5 61 aa6.15□□□□□ -1.43
PSME3-217ENST00000622892 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
PSME3-217ENST00000622892 FAT4Q6V0I7 4981 aa6.1□□□□□ -1.43
PSME3-217ENST00000622892 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
PSME3-217ENST00000622892 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
PSME3-217ENST00000622892 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
PSME3-217ENST00000622892 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
PSME3-217ENST00000622892 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
PSME3-217ENST00000622892 M0R2T5 61 aa5.85□□□□□ -1.47
PSME3-217ENST00000622892 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
PSME3-217ENST00000622892 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
PSME3-217ENST00000622892 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
PSME3-217ENST00000622892 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
PSME3-217ENST00000622892 MT1HP80294 61 aa5.67□□□□□ -1.5
PSME3-217ENST00000622892 TNP1P09430 55 aa5.65□□□□□ -1.5
PSME3-217ENST00000622892 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
PSME3-217ENST00000622892 MT1FP04733 61 aa5.48□□□□□ -1.53
PSME3-217ENST00000622892 MT2AP02795 61 aa5.46□□□□□ -1.54
PSME3-217ENST00000622892 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
PSME3-217ENST00000622892 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
PSME3-217ENST00000622892 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
PSME3-217ENST00000622892 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
PSME3-217ENST00000622892 USH2AO75445 5202 aa5.4□□□□□ -1.55
PSME3-217ENST00000622892 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
PSME3-217ENST00000622892 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
PSME3-217ENST00000622892 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
PSME3-217ENST00000622892 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
PSME3-217ENST00000622892 LCE2BO14633 110 aa5.22□□□□□ -1.57
PSME3-217ENST00000622892 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
PSME3-217ENST00000622892 KRTAP8-1Q8IUC2 63 aa5.14□□□□□ -1.59
PSME3-217ENST00000622892 MT1BP07438 61 aa5.13□□□□□ -1.59
PSME3-217ENST00000622892 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
PSME3-217ENST00000622892 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
PSME3-217ENST00000622892 MT1XP80297 61 aa5.08□□□□□ -1.6
PSME3-217ENST00000622892 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
PSME3-217ENST00000622892 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
PSME3-217ENST00000622892 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
PSME3-217ENST00000622892 KMT2DO14686 5537 aa5.04□□□□□ -1.6
PSME3-217ENST00000622892 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
PSME3-217ENST00000622892 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
PSME3-217ENST00000622892 INE1O15225 51 aa4.94□□□□□ -1.62
PSME3-217ENST00000622892 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
PSME3-217ENST00000622892 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
PSME3-217ENST00000622892 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
PSME3-217ENST00000622892 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
PSME3-217ENST00000622892 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
PSME3-217ENST00000622892 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
PSME3-217ENST00000622892 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
PSME3-217ENST00000622892 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.66
PSME3-217ENST00000622892 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
PSME3-217ENST00000622892 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
PSME3-217ENST00000622892 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
PSME3-217ENST00000622892 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
PSME3-217ENST00000622892 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms