RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 A0A0D9SG42 100 aa6.33□□□□□ -1.4
SCAMP1-207ENST00000621999 UQCR11O14957 56 aa6.32□□□□□ -1.4
SCAMP1-207ENST00000621999 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
SCAMP1-207ENST00000621999 A0A1B0GU33 70 aa6.29□□□□□ -1.4
SCAMP1-207ENST00000621999 R4GN34 69 aa6.28□□□□□ -1.4
SCAMP1-207ENST00000621999 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
SCAMP1-207ENST00000621999 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
SCAMP1-207ENST00000621999 Q1T7F1 81 aa6.24□□□□□ -1.41
SCAMP1-207ENST00000621999 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
SCAMP1-207ENST00000621999 M0QZ58 72 aa6.21□□□□□ -1.41
SCAMP1-207ENST00000621999 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
SCAMP1-207ENST00000621999 LRP2P98164 4655 aa6.19□□□□□ -1.42
SCAMP1-207ENST00000621999 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.43
SCAMP1-207ENST00000621999 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.43
SCAMP1-207ENST00000621999 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
SCAMP1-207ENST00000621999 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
SCAMP1-207ENST00000621999 Q5VV11 94 aa6.11□□□□□ -1.43
SCAMP1-207ENST00000621999 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
SCAMP1-207ENST00000621999 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
SCAMP1-207ENST00000621999 TNXBP22105 4242 aa6.11□□□□□ -1.43
SCAMP1-207ENST00000621999 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
SCAMP1-207ENST00000621999 HERC1Q15751 4861 aa6.1□□□□□ -1.43
SCAMP1-207ENST00000621999 LPAP08519 4548 aa6.08□□□□□ -1.44
SCAMP1-207ENST00000621999 P0C880 135 aa6.04□□□□□ -1.44
SCAMP1-207ENST00000621999 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
SCAMP1-207ENST00000621999 A8MU10 97 aa6□□□□□ -1.45
SCAMP1-207ENST00000621999 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
SCAMP1-207ENST00000621999 PRO0628Q9UI54 55 aa5.96□□□□□ -1.46
SCAMP1-207ENST00000621999 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SCAMP1-207ENST00000621999 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
SCAMP1-207ENST00000621999 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
SCAMP1-207ENST00000621999 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
SCAMP1-207ENST00000621999 MT1HP80294 61 aa5.82□□□□□ -1.48
SCAMP1-207ENST00000621999 H0YAA0 97 aa5.82□□□□□ -1.48
SCAMP1-207ENST00000621999 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
SCAMP1-207ENST00000621999 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
SCAMP1-207ENST00000621999 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
SCAMP1-207ENST00000621999 MUC2Q02817 5179 aa5.74□□□□□ -1.49
SCAMP1-207ENST00000621999 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
SCAMP1-207ENST00000621999 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
SCAMP1-207ENST00000621999 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
SCAMP1-207ENST00000621999 ROMO1P60602 79 aa5.66□□□□□ -1.5
SCAMP1-207ENST00000621999 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
SCAMP1-207ENST00000621999 MT2AP02795 61 aa5.61□□□□□ -1.51
SCAMP1-207ENST00000621999 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
SCAMP1-207ENST00000621999 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
SCAMP1-207ENST00000621999 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
SCAMP1-207ENST00000621999 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
SCAMP1-207ENST00000621999 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
SCAMP1-207ENST00000621999 MT1FP04733 61 aa5.56□□□□□ -1.52
SCAMP1-207ENST00000621999 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
SCAMP1-207ENST00000621999 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
SCAMP1-207ENST00000621999 TNP1P09430 55 aa5.55□□□□□ -1.52
SCAMP1-207ENST00000621999 A6NN06 94 aa5.47□□□□□ -1.53
SCAMP1-207ENST00000621999 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
SCAMP1-207ENST00000621999 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
SCAMP1-207ENST00000621999 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
SCAMP1-207ENST00000621999 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
SCAMP1-207ENST00000621999 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
SCAMP1-207ENST00000621999 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
SCAMP1-207ENST00000621999 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
SCAMP1-207ENST00000621999 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
SCAMP1-207ENST00000621999 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
SCAMP1-207ENST00000621999 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
SCAMP1-207ENST00000621999 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
SCAMP1-207ENST00000621999 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
SCAMP1-207ENST00000621999 LCE2BO14633 110 aa5.16□□□□□ -1.58
SCAMP1-207ENST00000621999 MT1BP07438 61 aa5.15□□□□□ -1.59
SCAMP1-207ENST00000621999 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
SCAMP1-207ENST00000621999 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
SCAMP1-207ENST00000621999 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
SCAMP1-207ENST00000621999 MT1XP80297 61 aa5□□□□□ -1.61
SCAMP1-207ENST00000621999 LCE3AQ5TA76 89 aa5□□□□□ -1.61
SCAMP1-207ENST00000621999 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
SCAMP1-207ENST00000621999 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
SCAMP1-207ENST00000621999 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
SCAMP1-207ENST00000621999 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
SCAMP1-207ENST00000621999 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
SCAMP1-207ENST00000621999 USH2AO75445 5202 aa4.92□□□□□ -1.62
SCAMP1-207ENST00000621999 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
SCAMP1-207ENST00000621999 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
SCAMP1-207ENST00000621999 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
SCAMP1-207ENST00000621999 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
SCAMP1-207ENST00000621999 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
SCAMP1-207ENST00000621999 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
SCAMP1-207ENST00000621999 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
SCAMP1-207ENST00000621999 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
SCAMP1-207ENST00000621999 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
SCAMP1-207ENST00000621999 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
SCAMP1-207ENST00000621999 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
SCAMP1-207ENST00000621999 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
SCAMP1-207ENST00000621999 SPRR2EP22531 72 aa4.54□□□□□ -1.68
SCAMP1-207ENST00000621999 SPRR2BP35325 72 aa4.54□□□□□ -1.68
SCAMP1-207ENST00000621999 SPRR2AP35326 72 aa4.54□□□□□ -1.68
SCAMP1-207ENST00000621999 KMT2DO14686 5537 aa4.52□□□□□ -1.69
SCAMP1-207ENST00000621999 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
SCAMP1-207ENST00000621999 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-207ENST00000621999 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
SCAMP1-207ENST00000621999 MT1EP04732 61 aa4.42□□□□□ -1.7
SCAMP1-207ENST00000621999 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms