RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 C9orf92A6NGG3 77 aa1.71□□□□□ -2.14
U1.39-201ENST00000621562 SEC61GP60059 68 aa1.71□□□□□ -2.14
U1.39-201ENST00000621562 RBM12B-AS1Q9P1G2 102 aa1.71□□□□□ -2.14
U1.39-201ENST00000621562 H0YAA0 97 aa1.7□□□□□ -2.14
U1.39-201ENST00000621562 UQCR11O14957 56 aa1.7□□□□□ -2.14
U1.39-201ENST00000621562 MIR22HGQ0VDD5 57 aa1.7□□□□□ -2.14
U1.39-201ENST00000621562 ADM2Q7Z4H4 148 aa1.7□□□□□ -2.14
U1.39-201ENST00000621562 KRTAP10-8P60410 259 aa1.69□□□□□ -2.14
U1.39-201ENST00000621562 PRAC1Q96KF2 57 aa1.69□□□□□ -2.14
U1.39-201ENST00000621562 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
U1.39-201ENST00000621562 MT1HL1P0DM35 61 aa1.67□□□□□ -2.14
U1.39-201ENST00000621562 KRTAP3-3Q9BYR6 98 aa1.67□□□□□ -2.14
U1.39-201ENST00000621562 KRTAP10-6P60371 365 aaPredicted RBP1.66□□□□□ -2.14
U1.39-201ENST00000621562 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
U1.39-201ENST00000621562 H1FX-AS1Q4G0G2 97 aa1.66□□□□□ -2.14
U1.39-201ENST00000621562 XP32Q5T750 250 aa1.66□□□□□ -2.14
U1.39-201ENST00000621562 KRTAP3-2Q9BYR7 98 aa1.66□□□□□ -2.14
U1.39-201ENST00000621562 PCLOQ9Y6V0 5065 aa1.66□□□□□ -2.14
U1.39-201ENST00000621562 HMCN2Q8NDA2 5059 aa1.65□□□□□ -2.15
U1.39-201ENST00000621562 Q5VSD8 79 aa1.65□□□□□ -2.15
U1.39-201ENST00000621562 A0A1B0GU33 70 aa1.64□□□□□ -2.15
U1.39-201ENST00000621562 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
U1.39-201ENST00000621562 CSAG1Q6PB30 78 aa1.63□□□□□ -2.15
U1.39-201ENST00000621562 LINC01554Q52M75 96 aa1.61□□□□□ -2.15
U1.39-201ENST00000621562 S4R3F8 94 aa1.61□□□□□ -2.15
U1.39-201ENST00000621562 P0C880 135 aa1.6□□□□□ -2.15
U1.39-201ENST00000621562 J3QL48 77 aa1.59□□□□□ -2.15
U1.39-201ENST00000621562 TPRXLQ17RH7 258 aa1.59□□□□□ -2.15
U1.39-201ENST00000621562 KRTAP25-1Q3LHN0 102 aa1.59□□□□□ -2.15
U1.39-201ENST00000621562 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
U1.39-201ENST00000621562 KRTAP4-5Q9BYR2 181 aa1.58□□□□□ -2.16
U1.39-201ENST00000621562 KRTAP19-2Q3LHN2 52 aa1.57□□□□□ -2.16
U1.39-201ENST00000621562 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
U1.39-201ENST00000621562 KRTAP12-2P59991 146 aa1.56□□□□□ -2.16
U1.39-201ENST00000621562 ROMO1P60602 79 aa1.56□□□□□ -2.16
U1.39-201ENST00000621562 KRTAP4-1Q9BYQ7 146 aa1.56□□□□□ -2.16
U1.39-201ENST00000621562 A0A0D9SG42 100 aa1.55□□□□□ -2.16
U1.39-201ENST00000621562 LCE2DQ5TA82 110 aaPredicted RBP1.54□□□□□ -2.16
U1.39-201ENST00000621562 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
U1.39-201ENST00000621562 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
U1.39-201ENST00000621562 K7ERS5 55 aa1.53□□□□□ -2.16
U1.39-201ENST00000621562 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.16
U1.39-201ENST00000621562 M0QZ58 72 aa1.52□□□□□ -2.17
U1.39-201ENST00000621562 LORP23490 312 aaPredicted RBP1.52□□□□□ -2.17
U1.39-201ENST00000621562 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
U1.39-201ENST00000621562 MUC2Q02817 5179 aa1.51□□□□□ -2.17
U1.39-201ENST00000621562 SEC61BP60468 96 aaKnown RBP1.49□□□□□ -2.17
U1.39-201ENST00000621562 KRTAP15-1Q3LI76 137 aa1.49□□□□□ -2.17
U1.39-201ENST00000621562 SPINT4Q6UDR6 99 aa1.48□□□□□ -2.17
U1.39-201ENST00000621562 H3BS24 57 aa1.45□□□□□ -2.18
U1.39-201ENST00000621562 LCE2CQ5TA81 110 aa1.45□□□□□ -2.18
U1.39-201ENST00000621562 R4GN34 69 aa1.45□□□□□ -2.18
U1.39-201ENST00000621562 KRTAP19-1Q8IUB9 90 aa1.4□□□□□ -2.19
U1.39-201ENST00000621562 SPRR2GQ9BYE4 73 aa1.4□□□□□ -2.19
U1.39-201ENST00000621562 NDUFAF8A1L188 74 aa1.38□□□□□ -2.19
U1.39-201ENST00000621562 MT1HP80294 61 aa1.38□□□□□ -2.19
U1.39-201ENST00000621562 A0A0A0MQY5 61 aa1.37□□□□□ -2.19
U1.39-201ENST00000621562 KRTAP23-1A1A580 65 aa1.37□□□□□ -2.19
U1.39-201ENST00000621562 MT2AP02795 61 aa1.37□□□□□ -2.19
U1.39-201ENST00000621562 MT1FP04733 61 aa1.37□□□□□ -2.19
U1.39-201ENST00000621562 PP632Q6XCG6 107 aa1.37□□□□□ -2.19
U1.39-201ENST00000621562 PLAC4Q8WY50 150 aa1.37□□□□□ -2.19
U1.39-201ENST00000621562 SPRR5A0A1B0GTR4 108 aa1.36□□□□□ -2.19
U1.39-201ENST00000621562 LCE2BO14633 110 aa1.36□□□□□ -2.19
U1.39-201ENST00000621562 LCE2AQ5TA79 106 aaPredicted RBP1.36□□□□□ -2.19
U1.39-201ENST00000621562 CAMK2N1Q7Z7J9 78 aa1.36□□□□□ -2.19
U1.39-201ENST00000621562 KRTAP9-8Q9BYQ0 159 aa1.36□□□□□ -2.19
U1.39-201ENST00000621562 KRTAP19-8Q3LI54 63 aa1.35□□□□□ -2.19
U1.39-201ENST00000621562 MT1BP07438 61 aa1.34□□□□□ -2.19
U1.39-201ENST00000621562 TNP1P09430 55 aa1.34□□□□□ -2.19
U1.39-201ENST00000621562 USH2AO75445 5202 aa1.34□□□□□ -2.2
U1.39-201ENST00000621562 MT1XP80297 61 aa1.32□□□□□ -2.2
U1.39-201ENST00000621562 LCE3AQ5TA76 89 aa1.32□□□□□ -2.2
U1.39-201ENST00000621562 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
U1.39-201ENST00000621562 KRTAP10-5P60370 271 aa1.31□□□□□ -2.2
U1.39-201ENST00000621562 KRTAP10-10P60014 251 aa1.3□□□□□ -2.2
U1.39-201ENST00000621562 KRTAP8-1Q8IUC2 63 aa1.3□□□□□ -2.2
U1.39-201ENST00000621562 KRTAP9-3Q9BYQ3 159 aa1.3□□□□□ -2.2
U1.39-201ENST00000621562 KMT2DO14686 5537 aa1.29□□□□□ -2.2
U1.39-201ENST00000621562 M0R2T5 61 aa1.28□□□□□ -2.2
U1.39-201ENST00000621562 KRTAP10-7P60409 375 aaPredicted RBP1.27□□□□□ -2.21
U1.39-201ENST00000621562 KRTAP10-12P60413 245 aa1.25□□□□□ -2.21
U1.39-201ENST00000621562 LUZP6Q538Z0 58 aa1.24□□□□□ -2.21
U1.39-201ENST00000621562 KRTAP12-3P60328 96 aa1.23□□□□□ -2.21
U1.39-201ENST00000621562 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
U1.39-201ENST00000621562 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
U1.39-201ENST00000621562 KRTAP19-7Q3SYF9 63 aa1.18□□□□□ -2.22
U1.39-201ENST00000621562 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
U1.39-201ENST00000621562 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
U1.39-201ENST00000621562 MUC12Q9UKN1 5478 aa1.17□□□□□ -2.22
U1.39-201ENST00000621562 KRTAP4-8A0A0G2JLE6 195 aa1.17□□□□□ -2.22
U1.39-201ENST00000621562 LCE3CQ5T5A8 94 aa1.17□□□□□ -2.22
U1.39-201ENST00000621562 KRTAP4-8Q9BYQ9 185 aa1.17□□□□□ -2.22
U1.39-201ENST00000621562 MT1EP04732 61 aa1.14□□□□□ -2.23
U1.39-201ENST00000621562 MT1LQ93083 61 aa1.14□□□□□ -2.23
U1.39-201ENST00000621562 KRTAP2-3P0C7H8 128 aa1.13□□□□□ -2.23
U1.39-201ENST00000621562 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
U1.39-201ENST00000621562 KRTAP4-7Q9BYR0 210 aa1.13□□□□□ -2.23
U1.39-201ENST00000621562 KRTAP2-4Q9BYR9 128 aa1.13□□□□□ -2.23
U1.39-201ENST00000621562 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms