RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 P0C880 135 aa4.95□□□□□ -1.62
GTF2I-219ENST00000621040 SPRR1BP22528 89 aa4.95□□□□□ -1.62
GTF2I-219ENST00000621040 LRP2P98164 4655 aa4.95□□□□□ -1.62
GTF2I-219ENST00000621040 ACYP2P14621 99 aa4.94□□□□□ -1.62
GTF2I-219ENST00000621040 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
GTF2I-219ENST00000621040 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.62
GTF2I-219ENST00000621040 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
GTF2I-219ENST00000621040 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
GTF2I-219ENST00000621040 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
GTF2I-219ENST00000621040 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
GTF2I-219ENST00000621040 C8orf17Q9NRJ1 99 aa4.87□□□□□ -1.63
GTF2I-219ENST00000621040 A8MUU9 505 aa4.86□□□□□ -1.63
GTF2I-219ENST00000621040 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
GTF2I-219ENST00000621040 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
GTF2I-219ENST00000621040 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
GTF2I-219ENST00000621040 MRPL34Q9BQ48 92 aaKnown RBP4.83□□□□□ -1.64
GTF2I-219ENST00000621040 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
GTF2I-219ENST00000621040 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
GTF2I-219ENST00000621040 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
GTF2I-219ENST00000621040 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
GTF2I-219ENST00000621040 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
GTF2I-219ENST00000621040 SPINK1P00995 79 aa4.81□□□□□ -1.64
GTF2I-219ENST00000621040 A0A1B0GVX0 72 aa4.8□□□□□ -1.64
GTF2I-219ENST00000621040 Q5W150 140 aa4.78□□□□□ -1.64
GTF2I-219ENST00000621040 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
GTF2I-219ENST00000621040 C20orf166-AS1Q96NR2 134 aa4.75□□□□□ -1.65
GTF2I-219ENST00000621040 H0YAA0 97 aa4.71□□□□□ -1.66
GTF2I-219ENST00000621040 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
GTF2I-219ENST00000621040 XP32Q5T750 250 aa4.71□□□□□ -1.66
GTF2I-219ENST00000621040 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
GTF2I-219ENST00000621040 MUC2Q02817 5179 aa4.69□□□□□ -1.66
GTF2I-219ENST00000621040 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
GTF2I-219ENST00000621040 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
GTF2I-219ENST00000621040 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
GTF2I-219ENST00000621040 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
GTF2I-219ENST00000621040 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
GTF2I-219ENST00000621040 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
GTF2I-219ENST00000621040 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
GTF2I-219ENST00000621040 LCE2CQ5TA81 110 aa4.57□□□□□ -1.68
GTF2I-219ENST00000621040 A0A1B0GU33 70 aa4.55□□□□□ -1.68
GTF2I-219ENST00000621040 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
GTF2I-219ENST00000621040 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
GTF2I-219ENST00000621040 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
GTF2I-219ENST00000621040 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
GTF2I-219ENST00000621040 K7ERS5 55 aa4.53□□□□□ -1.68
GTF2I-219ENST00000621040 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
GTF2I-219ENST00000621040 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
GTF2I-219ENST00000621040 MT1HP80294 61 aa4.43□□□□□ -1.7
GTF2I-219ENST00000621040 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
GTF2I-219ENST00000621040 A0A0D9SG42 100 aa4.37□□□□□ -1.71
GTF2I-219ENST00000621040 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
GTF2I-219ENST00000621040 LCE2BO14633 110 aa4.32□□□□□ -1.72
GTF2I-219ENST00000621040 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
GTF2I-219ENST00000621040 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
GTF2I-219ENST00000621040 M0R2T5 61 aa4.31□□□□□ -1.72
GTF2I-219ENST00000621040 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
GTF2I-219ENST00000621040 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
GTF2I-219ENST00000621040 S4R3F8 94 aa4.21□□□□□ -1.74
GTF2I-219ENST00000621040 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
GTF2I-219ENST00000621040 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
GTF2I-219ENST00000621040 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.74
GTF2I-219ENST00000621040 MT2AP02795 61 aa4.15□□□□□ -1.75
GTF2I-219ENST00000621040 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
GTF2I-219ENST00000621040 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
GTF2I-219ENST00000621040 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
GTF2I-219ENST00000621040 MT1FP04733 61 aa4.11□□□□□ -1.75
GTF2I-219ENST00000621040 FSIP2Q5CZC0 6907 aa4.09□□□□□ -1.75
GTF2I-219ENST00000621040 USH2AO75445 5202 aa4.08□□□□□ -1.76
GTF2I-219ENST00000621040 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
GTF2I-219ENST00000621040 R4GN34 69 aa4.07□□□□□ -1.76
GTF2I-219ENST00000621040 M0QZ58 72 aa4.05□□□□□ -1.76
GTF2I-219ENST00000621040 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
GTF2I-219ENST00000621040 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
GTF2I-219ENST00000621040 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
GTF2I-219ENST00000621040 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
GTF2I-219ENST00000621040 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
GTF2I-219ENST00000621040 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
GTF2I-219ENST00000621040 SPRR2GQ9BYE4 73 aa3.9□□□□□ -1.79
GTF2I-219ENST00000621040 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
GTF2I-219ENST00000621040 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
GTF2I-219ENST00000621040 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
GTF2I-219ENST00000621040 INE1O15225 51 aa3.85□□□□□ -1.79
GTF2I-219ENST00000621040 MT1BP07438 61 aa3.84□□□□□ -1.79
GTF2I-219ENST00000621040 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
GTF2I-219ENST00000621040 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
GTF2I-219ENST00000621040 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.81
GTF2I-219ENST00000621040 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
GTF2I-219ENST00000621040 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
GTF2I-219ENST00000621040 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.82
GTF2I-219ENST00000621040 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
GTF2I-219ENST00000621040 MT1XP80297 61 aa3.61□□□□□ -1.83
GTF2I-219ENST00000621040 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
GTF2I-219ENST00000621040 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
GTF2I-219ENST00000621040 NEBP20929 6669 aa3.52□□□□□ -1.85
GTF2I-219ENST00000621040 TNP1P09430 55 aa3.52□□□□□ -1.85
GTF2I-219ENST00000621040 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
GTF2I-219ENST00000621040 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
GTF2I-219ENST00000621040 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
GTF2I-219ENST00000621040 KMT2DO14686 5537 aa3.44□□□□□ -1.86
GTF2I-219ENST00000621040 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms