RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 Q5VV11 94 aa7.68□□□□□ -1.18
HMGN3-203ENST00000620514 KLKP1Q107X0 134 aa7.67□□□□□ -1.18
HMGN3-203ENST00000620514 KRTAP4-12Q9BQ66 201 aa7.66□□□□□ -1.18
HMGN3-203ENST00000620514 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
HMGN3-203ENST00000620514 A6NN06 94 aa7.64□□□□□ -1.19
HMGN3-203ENST00000620514 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
HMGN3-203ENST00000620514 ATP5EP2Q5VTU8 51 aa7.63□□□□□ -1.19
HMGN3-203ENST00000620514 H0Y9P7 68 aa7.6□□□□□ -1.19
HMGN3-203ENST00000620514 UQCRQO14949 82 aa7.6□□□□□ -1.19
HMGN3-203ENST00000620514 ATOX1O00244 68 aa7.55□□□□□ -1.2
HMGN3-203ENST00000620514 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
HMGN3-203ENST00000620514 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
HMGN3-203ENST00000620514 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
HMGN3-203ENST00000620514 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
HMGN3-203ENST00000620514 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
HMGN3-203ENST00000620514 NDUFC1O43677 76 aa7.5□□□□□ -1.21
HMGN3-203ENST00000620514 NEBP20929 6669 aa7.48□□□□□ -1.21
HMGN3-203ENST00000620514 LINC00208Q96KT6 92 aa7.47□□□□□ -1.21
HMGN3-203ENST00000620514 H0YAA0 97 aa7.45□□□□□ -1.22
HMGN3-203ENST00000620514 A8MUN3 132 aa7.43□□□□□ -1.22
HMGN3-203ENST00000620514 KRTAP19-4Q3LI73 84 aa7.42□□□□□ -1.22
HMGN3-203ENST00000620514 OCR1Q9BZK8 76 aa7.42□□□□□ -1.22
HMGN3-203ENST00000620514 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
HMGN3-203ENST00000620514 A0A1B0GV90 55 aa7.41□□□□□ -1.22
HMGN3-203ENST00000620514 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
HMGN3-203ENST00000620514 MP68P56378 58 aa7.38□□□□□ -1.23
HMGN3-203ENST00000620514 KRTAP9-9Q9BYP9 154 aa7.32□□□□□ -1.24
HMGN3-203ENST00000620514 KRTAP9-4Q9BYQ2 154 aa7.32□□□□□ -1.24
HMGN3-203ENST00000620514 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
HMGN3-203ENST00000620514 KMT2DO14686 5537 aa7.26□□□□□ -1.25
HMGN3-203ENST00000620514 H3BPC8 53 aa7.25□□□□□ -1.25
HMGN3-203ENST00000620514 P0C880 135 aa7.25□□□□□ -1.25
HMGN3-203ENST00000620514 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
HMGN3-203ENST00000620514 J3QR89 54 aa7.22□□□□□ -1.25
HMGN3-203ENST00000620514 MT1XP80297 61 aa7.22□□□□□ -1.25
HMGN3-203ENST00000620514 SCGB1A1P11684 91 aa7.21□□□□□ -1.26
HMGN3-203ENST00000620514 R4GN34 69 aa7.2□□□□□ -1.26
HMGN3-203ENST00000620514 MDN1Q9NU22 5596 aa7.2□□□□□ -1.26
HMGN3-203ENST00000620514 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
HMGN3-203ENST00000620514 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
HMGN3-203ENST00000620514 M0QZ58 72 aa7.17□□□□□ -1.26
HMGN3-203ENST00000620514 KRTAP20-1Q3LI63 56 aa7.16□□□□□ -1.26
HMGN3-203ENST00000620514 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
HMGN3-203ENST00000620514 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
HMGN3-203ENST00000620514 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
HMGN3-203ENST00000620514 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
HMGN3-203ENST00000620514 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
HMGN3-203ENST00000620514 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
HMGN3-203ENST00000620514 MT-ATP8P03928 68 aa7.05□□□□□ -1.28
HMGN3-203ENST00000620514 LCE1DQ5T752 114 aa7.05□□□□□ -1.28
HMGN3-203ENST00000620514 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
HMGN3-203ENST00000620514 ACYP2P14621 99 aa7.02□□□□□ -1.29
HMGN3-203ENST00000620514 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
HMGN3-203ENST00000620514 SPRR2EP22531 72 aa7□□□□□ -1.29
HMGN3-203ENST00000620514 SPRR2BP35325 72 aa7□□□□□ -1.29
HMGN3-203ENST00000620514 SPRR2AP35326 72 aa7□□□□□ -1.29
HMGN3-203ENST00000620514 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
HMGN3-203ENST00000620514 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
HMGN3-203ENST00000620514 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
HMGN3-203ENST00000620514 SPTSSBQ8NFR3 76 aa6.93□□□□□ -1.3
HMGN3-203ENST00000620514 K7ERU9 68 aa6.92□□□□□ -1.3
HMGN3-203ENST00000620514 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
HMGN3-203ENST00000620514 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.3
HMGN3-203ENST00000620514 LCE1AQ5T7P2 110 aa6.9□□□□□ -1.3
HMGN3-203ENST00000620514 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
HMGN3-203ENST00000620514 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
HMGN3-203ENST00000620514 KRTAP10-12P60413 245 aa6.84□□□□□ -1.31
HMGN3-203ENST00000620514 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
HMGN3-203ENST00000620514 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
HMGN3-203ENST00000620514 SPRR2DP22532 72 aa6.76□□□□□ -1.33
HMGN3-203ENST00000620514 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
HMGN3-203ENST00000620514 SERP2Q8N6R1 65 aa6.73□□□□□ -1.33
HMGN3-203ENST00000620514 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
HMGN3-203ENST00000620514 KRTAP2-2Q9BYT5 123 aa6.72□□□□□ -1.33
HMGN3-203ENST00000620514 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
HMGN3-203ENST00000620514 COA5Q86WW8 74 aa6.63□□□□□ -1.35
HMGN3-203ENST00000620514 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
HMGN3-203ENST00000620514 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
HMGN3-203ENST00000620514 KRTAP4-2Q9BYR5 136 aa6.58□□□□□ -1.36
HMGN3-203ENST00000620514 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
HMGN3-203ENST00000620514 A0A0D9SG42 100 aa6.52□□□□□ -1.37
HMGN3-203ENST00000620514 SERP1Q9Y6X1 66 aa6.51□□□□□ -1.37
HMGN3-203ENST00000620514 SEC61GP60059 68 aa6.5□□□□□ -1.37
HMGN3-203ENST00000620514 SPATA8Q6RVD6 105 aa6.5□□□□□ -1.37
HMGN3-203ENST00000620514 COX7CP15954 63 aa6.49□□□□□ -1.37
HMGN3-203ENST00000620514 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
HMGN3-203ENST00000620514 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
HMGN3-203ENST00000620514 H7BZZ5 65 aa6.44□□□□□ -1.38
HMGN3-203ENST00000620514 A0A1B0GU33 70 aa6.43□□□□□ -1.38
HMGN3-203ENST00000620514 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
HMGN3-203ENST00000620514 MT1EP04732 61 aa6.41□□□□□ -1.38
HMGN3-203ENST00000620514 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
HMGN3-203ENST00000620514 KRTAP19-3Q7Z4W3 81 aa6.36□□□□□ -1.39
HMGN3-203ENST00000620514 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
HMGN3-203ENST00000620514 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
HMGN3-203ENST00000620514 A0A1B0GU69 56 aa6.27□□□□□ -1.41
HMGN3-203ENST00000620514 A8MU10 97 aa6.25□□□□□ -1.41
HMGN3-203ENST00000620514 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
HMGN3-203ENST00000620514 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.42
HMGN3-203ENST00000620514 MT1GP13640 62 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms