RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 CELSR1Q9NYQ6 3014 aa1.88□□□□□ -2.11
CHL1-216ENST00000620033 LAMA5O15230 3695 aa1.88□□□□□ -2.11
CHL1-216ENST00000620033 ZFHX3Q15911 3703 aa1.87□□□□□ -2.11
CHL1-216ENST00000620033 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
CHL1-216ENST00000620033 DCHS1Q96JQ0 3298 aa1.87□□□□□ -2.11
CHL1-216ENST00000620033 SPENQ96T58 3664 aaKnown RBP1.87□□□□□ -2.11
CHL1-216ENST00000620033 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
CHL1-216ENST00000620033 OTOGQ6ZRI0 2925 aa1.86□□□□□ -2.11
CHL1-216ENST00000620033 DNAH6Q9C0G6 4158 aa1.86□□□□□ -2.11
CHL1-216ENST00000620033 HYDINQ4G0P3 5121 aa1.86□□□□□ -2.11
CHL1-216ENST00000620033 CSMD1Q96PZ7 3565 aa1.85□□□□□ -2.11
CHL1-216ENST00000620033 PKD1L1Q8TDX9 2849 aa1.85□□□□□ -2.11
CHL1-216ENST00000620033 MT2AP02795 61 aa1.85□□□□□ -2.11
CHL1-216ENST00000620033 KRTAP19-1Q8IUB9 90 aa1.85□□□□□ -2.11
CHL1-216ENST00000620033 TRRAPQ9Y4A5 3859 aa1.84□□□□□ -2.12
CHL1-216ENST00000620033 KRTAP3-1Q9BYR8 98 aa1.83□□□□□ -2.12
CHL1-216ENST00000620033 LOC100996750A0A140TA64 210 aa1.81□□□□□ -2.12
CHL1-216ENST00000620033 MT4P47944 62 aa1.81□□□□□ -2.12
CHL1-216ENST00000620033 KRTAP4-6Q9BYQ5 205 aa1.81□□□□□ -2.12
CHL1-216ENST00000620033 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
CHL1-216ENST00000620033 SVEP1Q4LDE5 3571 aa1.81□□□□□ -2.12
CHL1-216ENST00000620033 LCE3BQ5TA77 95 aa1.81□□□□□ -2.12
CHL1-216ENST00000620033 DNAH2Q9P225 4427 aa1.8□□□□□ -2.12
CHL1-216ENST00000620033 FAT2Q9NYQ8 4349 aa1.8□□□□□ -2.12
CHL1-216ENST00000620033 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
CHL1-216ENST00000620033 KRTAP9-7A8MTY7 169 aa1.79□□□□□ -2.12
CHL1-216ENST00000620033 KRTAP4-1Q9BYQ7 146 aa1.79□□□□□ -2.12
CHL1-216ENST00000620033 DNAH9Q9NYC9 4486 aa1.79□□□□□ -2.12
CHL1-216ENST00000620033 SRRM2Q9UQ35 2752 aaKnown RBP1.79□□□□□ -2.12
CHL1-216ENST00000620033 TGP01266 2768 aa1.79□□□□□ -2.12
CHL1-216ENST00000620033 MT1FP04733 61 aa1.79□□□□□ -2.12
CHL1-216ENST00000620033 FBN3Q75N90 2809 aa1.78□□□□□ -2.12
CHL1-216ENST00000620033 CMYA5Q8N3K9 4069 aa1.78□□□□□ -2.12
CHL1-216ENST00000620033 RYR3Q15413 4870 aa1.78□□□□□ -2.12
CHL1-216ENST00000620033 EPPK1P58107 5090 aaKnown RBP1.77□□□□□ -2.13
CHL1-216ENST00000620033 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
CHL1-216ENST00000620033 VPS13CQ709C8 3753 aa1.76□□□□□ -2.13
CHL1-216ENST00000620033 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
CHL1-216ENST00000620033 ANK2Q01484 3957 aa1.76□□□□□ -2.13
CHL1-216ENST00000620033 CSMD2Q7Z408 3487 aa1.76□□□□□ -2.13
CHL1-216ENST00000620033 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
CHL1-216ENST00000620033 FBN1P35555 2871 aaKnown RBP1.75□□□□□ -2.13
CHL1-216ENST00000620033 FRAS1Q86XX4 4008 aa1.74□□□□□ -2.13
CHL1-216ENST00000620033 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
CHL1-216ENST00000620033 KMT2CQ8NEZ4 4911 aaKnown RBP1.73□□□□□ -2.13
CHL1-216ENST00000620033 DNAH17Q9UFH2 4485 aa1.73□□□□□ -2.13
CHL1-216ENST00000620033 PRKDCP78527 4128 aaKnown RBP1.73□□□□□ -2.13
CHL1-216ENST00000620033 MEGF8Q7Z7M0 2845 aa1.72□□□□□ -2.13
CHL1-216ENST00000620033 PLECQ15149 4684 aaKnown RBP1.72□□□□□ -2.13
CHL1-216ENST00000620033 KRTAP23-1A1A580 65 aa1.71□□□□□ -2.13
CHL1-216ENST00000620033 KIAA1109Q2LD37 5005 aa1.71□□□□□ -2.14
CHL1-216ENST00000620033 KRTAP3-3Q9BYR6 98 aa1.71□□□□□ -2.14
CHL1-216ENST00000620033 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
CHL1-216ENST00000620033 ZNF469Q96JG9 3925 aaPredicted RBP1.71□□□□□ -2.14
CHL1-216ENST00000620033 SPRR2GQ9BYE4 73 aa1.71□□□□□ -2.14
CHL1-216ENST00000620033 CUBNO60494 3623 aa1.71□□□□□ -2.14
CHL1-216ENST00000620033 DNHD1Q96M86 4753 aa1.7□□□□□ -2.14
CHL1-216ENST00000620033 INE1O15225 51 aa1.7□□□□□ -2.14
CHL1-216ENST00000620033 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
CHL1-216ENST00000620033 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
CHL1-216ENST00000620033 HERC1Q15751 4861 aa1.7□□□□□ -2.14
CHL1-216ENST00000620033 HECTD4Q9Y4D8 3996 aa1.69□□□□□ -2.14
CHL1-216ENST00000620033 DNAH10Q8IVF4 4471 aa1.69□□□□□ -2.14
CHL1-216ENST00000620033 KRTAP3-2Q9BYR7 98 aa1.69□□□□□ -2.14
CHL1-216ENST00000620033 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
CHL1-216ENST00000620033 DYNC1H1Q14204 4646 aaKnown RBP1.67□□□□□ -2.14
CHL1-216ENST00000620033 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
CHL1-216ENST00000620033 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
CHL1-216ENST00000620033 USH2AO75445 5202 aa1.66□□□□□ -2.14
CHL1-216ENST00000620033 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
CHL1-216ENST00000620033 STARD9Q9P2P6 4700 aa1.66□□□□□ -2.14
CHL1-216ENST00000620033 UBR4Q5T4S7 5183 aa1.66□□□□□ -2.14
CHL1-216ENST00000620033 MT1GP13640 62 aa1.66□□□□□ -2.14
CHL1-216ENST00000620033 LCE3CQ5T5A8 94 aa1.65□□□□□ -2.15
CHL1-216ENST00000620033 LRP1BQ9NZR2 4599 aa1.65□□□□□ -2.15
CHL1-216ENST00000620033 COL7A1Q02388 2944 aa1.64□□□□□ -2.15
CHL1-216ENST00000620033 DNAH5Q8TE73 4624 aa1.64□□□□□ -2.15
CHL1-216ENST00000620033 DNAH8Q96JB1 4490 aa1.64□□□□□ -2.15
CHL1-216ENST00000620033 KMT2AQ03164 3969 aa1.63□□□□□ -2.15
CHL1-216ENST00000620033 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.62□□□□□ -2.15
CHL1-216ENST00000620033 KRTAP19-4Q3LI73 84 aa1.62□□□□□ -2.15
CHL1-216ENST00000620033 SACSQ9NZJ4 4579 aa1.62□□□□□ -2.15
CHL1-216ENST00000620033 HMCN2Q8NDA2 5059 aa1.61□□□□□ -2.15
CHL1-216ENST00000620033 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
CHL1-216ENST00000620033 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
CHL1-216ENST00000620033 LCE5AQ5TCM9 118 aa1.6□□□□□ -2.15
CHL1-216ENST00000620033 LCE1DQ5T752 114 aa1.59□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP2-2Q9BYT5 123 aa1.59□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.16
CHL1-216ENST00000620033 FAT4Q6V0I7 4981 aa1.58□□□□□ -2.16
CHL1-216ENST00000620033 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
CHL1-216ENST00000620033 LCE2AQ5TA79 106 aaPredicted RBP1.58□□□□□ -2.16
CHL1-216ENST00000620033 FAT1Q14517 4588 aa1.57□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
CHL1-216ENST00000620033 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP9-3Q9BYQ3 159 aa1.55□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP9-8Q9BYQ0 159 aa1.55□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP4-9Q9BYQ8 210 aa1.55□□□□□ -2.16
CHL1-216ENST00000620033 RNF213Q63HN8 5207 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms