RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 APOBP04114 4563 aaKnown RBP3.93□□□□□ -1.78
SRGAP3-213ENST00000618999 VPS13BQ7Z7G8 4022 aa3.93□□□□□ -1.78
SRGAP3-213ENST00000618999 FLG2Q5D862 2391 aaPredicted RBP3.92□□□□□ -1.78
SRGAP3-213ENST00000618999 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
SRGAP3-213ENST00000618999 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
SRGAP3-213ENST00000618999 DMBT1Q9UGM3 2413 aaPredicted RBP3.88□□□□□ -1.79
SRGAP3-213ENST00000618999 A0A1B0GU33 70 aa3.88□□□□□ -1.79
SRGAP3-213ENST00000618999 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
SRGAP3-213ENST00000618999 ROMO1P60602 79 aa3.87□□□□□ -1.79
SRGAP3-213ENST00000618999 C9orf92A6NGG3 77 aa3.86□□□□□ -1.79
SRGAP3-213ENST00000618999 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
SRGAP3-213ENST00000618999 RYR1P21817 5038 aa3.84□□□□□ -1.8
SRGAP3-213ENST00000618999 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
SRGAP3-213ENST00000618999 HSPG2P98160 4391 aa3.83□□□□□ -1.8
SRGAP3-213ENST00000618999 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
SRGAP3-213ENST00000618999 KRTAP17-1Q9BYP8 105 aa3.8□□□□□ -1.8
SRGAP3-213ENST00000618999 RPS29P62273 56 aaKnown RBP3.79□□□□□ -1.8
SRGAP3-213ENST00000618999 KRTAP25-1Q3LHN0 102 aa3.79□□□□□ -1.8
SRGAP3-213ENST00000618999 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
SRGAP3-213ENST00000618999 H0YAA0 97 aa3.78□□□□□ -1.8
SRGAP3-213ENST00000618999 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
SRGAP3-213ENST00000618999 A8MUU9 505 aa3.78□□□□□ -1.8
SRGAP3-213ENST00000618999 KRTAP4-5Q9BYR2 181 aa3.76□□□□□ -1.81
SRGAP3-213ENST00000618999 COX6B2Q6YFQ2 88 aa3.73□□□□□ -1.81
SRGAP3-213ENST00000618999 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
SRGAP3-213ENST00000618999 A0A0D9SG42 100 aa3.73□□□□□ -1.81
SRGAP3-213ENST00000618999 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
SRGAP3-213ENST00000618999 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
SRGAP3-213ENST00000618999 RPL37P61927 97 aaKnown RBP3.71□□□□□ -1.82
SRGAP3-213ENST00000618999 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
SRGAP3-213ENST00000618999 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
SRGAP3-213ENST00000618999 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
SRGAP3-213ENST00000618999 HERC2O95714 4834 aa3.66□□□□□ -1.82
SRGAP3-213ENST00000618999 TNXBP22105 4242 aa3.66□□□□□ -1.82
SRGAP3-213ENST00000618999 S4R3F8 94 aa3.65□□□□□ -1.83
SRGAP3-213ENST00000618999 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
SRGAP3-213ENST00000618999 P0C880 135 aa3.63□□□□□ -1.83
SRGAP3-213ENST00000618999 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
SRGAP3-213ENST00000618999 XP32Q5T750 250 aa3.61□□□□□ -1.83
SRGAP3-213ENST00000618999 TPRXLQ17RH7 258 aa3.58□□□□□ -1.84
SRGAP3-213ENST00000618999 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
SRGAP3-213ENST00000618999 KRTAP10-6P60371 365 aaPredicted RBP3.53□□□□□ -1.84
SRGAP3-213ENST00000618999 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
SRGAP3-213ENST00000618999 LRP2P98164 4655 aa3.52□□□□□ -1.85
SRGAP3-213ENST00000618999 R4GN34 69 aa3.51□□□□□ -1.85
SRGAP3-213ENST00000618999 LPAP08519 4548 aa3.51□□□□□ -1.85
SRGAP3-213ENST00000618999 M0QZ58 72 aa3.49□□□□□ -1.85
SRGAP3-213ENST00000618999 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
SRGAP3-213ENST00000618999 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
SRGAP3-213ENST00000618999 HERC1Q15751 4861 aa3.47□□□□□ -1.85
SRGAP3-213ENST00000618999 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
SRGAP3-213ENST00000618999 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
SRGAP3-213ENST00000618999 HMCN2Q8NDA2 5059 aa3.38□□□□□ -1.87
SRGAP3-213ENST00000618999 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
SRGAP3-213ENST00000618999 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
SRGAP3-213ENST00000618999 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
SRGAP3-213ENST00000618999 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
SRGAP3-213ENST00000618999 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
SRGAP3-213ENST00000618999 MUC2Q02817 5179 aa3.31□□□□□ -1.88
SRGAP3-213ENST00000618999 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
SRGAP3-213ENST00000618999 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
SRGAP3-213ENST00000618999 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
SRGAP3-213ENST00000618999 M0R2T5 61 aa3.25□□□□□ -1.89
SRGAP3-213ENST00000618999 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
SRGAP3-213ENST00000618999 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
SRGAP3-213ENST00000618999 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
SRGAP3-213ENST00000618999 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
SRGAP3-213ENST00000618999 TNP1P09430 55 aa3.18□□□□□ -1.9
SRGAP3-213ENST00000618999 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
SRGAP3-213ENST00000618999 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
SRGAP3-213ENST00000618999 MT1HP80294 61 aa3.13□□□□□ -1.91
SRGAP3-213ENST00000618999 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
SRGAP3-213ENST00000618999 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
SRGAP3-213ENST00000618999 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
SRGAP3-213ENST00000618999 MT2AP02795 61 aa3.02□□□□□ -1.93
SRGAP3-213ENST00000618999 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
SRGAP3-213ENST00000618999 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
SRGAP3-213ENST00000618999 MT1FP04733 61 aa3.01□□□□□ -1.93
SRGAP3-213ENST00000618999 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
SRGAP3-213ENST00000618999 KRTAP9-8Q9BYQ0 159 aa3□□□□□ -1.93
SRGAP3-213ENST00000618999 MT3P25713 68 aa2.98□□□□□ -1.93
SRGAP3-213ENST00000618999 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SRGAP3-213ENST00000618999 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
SRGAP3-213ENST00000618999 INE1O15225 51 aa2.9□□□□□ -1.94
SRGAP3-213ENST00000618999 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
SRGAP3-213ENST00000618999 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
SRGAP3-213ENST00000618999 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
SRGAP3-213ENST00000618999 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
SRGAP3-213ENST00000618999 KRTAP9-2Q9BYQ4 174 aa2.84□□□□□ -1.96
SRGAP3-213ENST00000618999 MT1BP07438 61 aa2.83□□□□□ -1.96
SRGAP3-213ENST00000618999 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
SRGAP3-213ENST00000618999 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
SRGAP3-213ENST00000618999 FSIP2Q5CZC0 6907 aa2.79□□□□□ -1.96
SRGAP3-213ENST00000618999 USH2AO75445 5202 aa2.78□□□□□ -1.96
SRGAP3-213ENST00000618999 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
SRGAP3-213ENST00000618999 KRTAP4-8Q9BYQ9 185 aa2.77□□□□□ -1.97
SRGAP3-213ENST00000618999 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SRGAP3-213ENST00000618999 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
SRGAP3-213ENST00000618999 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
SRGAP3-213ENST00000618999 MT1XP80297 61 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms