RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 RYR1P21817 5038 aa10.04□□□□□ -0.8
PCDHGB3-202ENST00000618934 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
PCDHGB3-202ENST00000618934 CSAG1Q6PB30 78 aa10.03□□□□□ -0.8
PCDHGB3-202ENST00000618934 A0A1B0GU33 70 aa10.01□□□□□ -0.81
PCDHGB3-202ENST00000618934 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
PCDHGB3-202ENST00000618934 XP32Q5T750 250 aa9.94□□□□□ -0.82
PCDHGB3-202ENST00000618934 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
PCDHGB3-202ENST00000618934 KIAA1109Q2LD37 5005 aa9.93□□□□□ -0.82
PCDHGB3-202ENST00000618934 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
PCDHGB3-202ENST00000618934 LPAP08519 4548 aa9.86□□□□□ -0.83
PCDHGB3-202ENST00000618934 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
PCDHGB3-202ENST00000618934 KRTAP10-6P60371 365 aaPredicted RBP9.8□□□□□ -0.84
PCDHGB3-202ENST00000618934 LRP2P98164 4655 aa9.77□□□□□ -0.84
PCDHGB3-202ENST00000618934 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
PCDHGB3-202ENST00000618934 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
PCDHGB3-202ENST00000618934 EPPK1P58107 5090 aaKnown RBP9.73□□□□□ -0.85
PCDHGB3-202ENST00000618934 S4R3F8 94 aa9.73□□□□□ -0.85
PCDHGB3-202ENST00000618934 KRTAP25-1Q3LHN0 102 aa9.71□□□□□ -0.86
PCDHGB3-202ENST00000618934 P0C880 135 aa9.64□□□□□ -0.87
PCDHGB3-202ENST00000618934 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
PCDHGB3-202ENST00000618934 ABCA13Q86UQ4 5058 aa9.63□□□□□ -0.87
PCDHGB3-202ENST00000618934 A0A0D9SG42 100 aa9.62□□□□□ -0.87
PCDHGB3-202ENST00000618934 K7ERS5 55 aa9.57□□□□□ -0.88
PCDHGB3-202ENST00000618934 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
PCDHGB3-202ENST00000618934 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
PCDHGB3-202ENST00000618934 ROMO1P60602 79 aa9.45□□□□□ -0.9
PCDHGB3-202ENST00000618934 H3BS24 57 aa9.39□□□□□ -0.91
PCDHGB3-202ENST00000618934 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
PCDHGB3-202ENST00000618934 MUC17Q685J3 4493 aa9.33□□□□□ -0.92
PCDHGB3-202ENST00000618934 KRTAP12-1P59990 96 aa9.3□□□□□ -0.92
PCDHGB3-202ENST00000618934 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
PCDHGB3-202ENST00000618934 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
PCDHGB3-202ENST00000618934 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
PCDHGB3-202ENST00000618934 HERC2O95714 4834 aa9.18□□□□□ -0.94
PCDHGB3-202ENST00000618934 M0QZ58 72 aa9.17□□□□□ -0.94
PCDHGB3-202ENST00000618934 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
PCDHGB3-202ENST00000618934 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
PCDHGB3-202ENST00000618934 J3QL48 77 aa9.05□□□□□ -0.96
PCDHGB3-202ENST00000618934 KRTAP19-2Q3LHN2 52 aa9.02□□□□□ -0.97
PCDHGB3-202ENST00000618934 MUC2Q02817 5179 aa9.02□□□□□ -0.97
PCDHGB3-202ENST00000618934 R4GN34 69 aa9.02□□□□□ -0.97
PCDHGB3-202ENST00000618934 KRTAP15-1Q3LI76 137 aa8.91□□□□□ -0.98
PCDHGB3-202ENST00000618934 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
PCDHGB3-202ENST00000618934 BIRC6Q9NR09 4857 aa8.85□□□□□ -0.99
PCDHGB3-202ENST00000618934 HERC1Q15751 4861 aa8.81□□□□□ -1
PCDHGB3-202ENST00000618934 NDUFAF8A1L188 74 aa8.76□□□□□ -1.01
PCDHGB3-202ENST00000618934 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
PCDHGB3-202ENST00000618934 HMCN2Q8NDA2 5059 aa8.66□□□□□ -1.02
PCDHGB3-202ENST00000618934 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
PCDHGB3-202ENST00000618934 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
PCDHGB3-202ENST00000618934 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
PCDHGB3-202ENST00000618934 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
PCDHGB3-202ENST00000618934 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
PCDHGB3-202ENST00000618934 UBR4Q5T4S7 5183 aa8.29□□□□□ -1.08
PCDHGB3-202ENST00000618934 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
PCDHGB3-202ENST00000618934 KRTAP19-1Q8IUB9 90 aa8.25□□□□□ -1.09
PCDHGB3-202ENST00000618934 MT1HP80294 61 aa8.22□□□□□ -1.09
PCDHGB3-202ENST00000618934 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
PCDHGB3-202ENST00000618934 M0R2T5 61 aa8.21□□□□□ -1.1
PCDHGB3-202ENST00000618934 TNP1P09430 55 aa8.2□□□□□ -1.1
PCDHGB3-202ENST00000618934 MT1FP04733 61 aa8.12□□□□□ -1.11
PCDHGB3-202ENST00000618934 MT2AP02795 61 aa8.09□□□□□ -1.11
PCDHGB3-202ENST00000618934 KRTAP10-10P60014 251 aa8.06□□□□□ -1.12
PCDHGB3-202ENST00000618934 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
PCDHGB3-202ENST00000618934 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
PCDHGB3-202ENST00000618934 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
PCDHGB3-202ENST00000618934 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
PCDHGB3-202ENST00000618934 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
PCDHGB3-202ENST00000618934 MT1BP07438 61 aa7.83□□□□□ -1.16
PCDHGB3-202ENST00000618934 SPRR5A0A1B0GTR4 108 aa7.82□□□□□ -1.16
PCDHGB3-202ENST00000618934 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
PCDHGB3-202ENST00000618934 A0A0A0MQY5 61 aa7.76□□□□□ -1.17
PCDHGB3-202ENST00000618934 MT1XP80297 61 aa7.76□□□□□ -1.17
PCDHGB3-202ENST00000618934 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
PCDHGB3-202ENST00000618934 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
PCDHGB3-202ENST00000618934 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
PCDHGB3-202ENST00000618934 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
PCDHGB3-202ENST00000618934 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
PCDHGB3-202ENST00000618934 LCE2BO14633 110 aa7.44□□□□□ -1.22
PCDHGB3-202ENST00000618934 USH2AO75445 5202 aa7.43□□□□□ -1.22
PCDHGB3-202ENST00000618934 KMT2DO14686 5537 aa7.32□□□□□ -1.24
PCDHGB3-202ENST00000618934 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
PCDHGB3-202ENST00000618934 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
PCDHGB3-202ENST00000618934 KRTAP19-5Q3LI72 72 aa7.22□□□□□ -1.25
PCDHGB3-202ENST00000618934 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
PCDHGB3-202ENST00000618934 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
PCDHGB3-202ENST00000618934 LCE3CQ5T5A8 94 aa7.02□□□□□ -1.28
PCDHGB3-202ENST00000618934 INE1O15225 51 aa6.94□□□□□ -1.3
PCDHGB3-202ENST00000618934 KRTAP19-7Q3SYF9 63 aa6.92□□□□□ -1.3
PCDHGB3-202ENST00000618934 SSPOA2VEC9 5147 aa6.9□□□□□ -1.31
PCDHGB3-202ENST00000618934 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
PCDHGB3-202ENST00000618934 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
PCDHGB3-202ENST00000618934 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
PCDHGB3-202ENST00000618934 MT1EP04732 61 aa6.7□□□□□ -1.34
PCDHGB3-202ENST00000618934 MT1LQ93083 61 aa6.69□□□□□ -1.34
PCDHGB3-202ENST00000618934 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
PCDHGB3-202ENST00000618934 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
PCDHGB3-202ENST00000618934 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
PCDHGB3-202ENST00000618934 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
PCDHGB3-202ENST00000618934 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms