RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
TMPRSS4-220ENST00000618855 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
TMPRSS4-220ENST00000618855 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
TMPRSS4-220ENST00000618855 RYR1P21817 5038 aa5.01□□□□□ -1.61
TMPRSS4-220ENST00000618855 S4R3F8 94 aa5.01□□□□□ -1.61
TMPRSS4-220ENST00000618855 RYR3Q15413 4870 aa5□□□□□ -1.61
TMPRSS4-220ENST00000618855 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
TMPRSS4-220ENST00000618855 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
TMPRSS4-220ENST00000618855 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.62
TMPRSS4-220ENST00000618855 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
TMPRSS4-220ENST00000618855 APOBP04114 4563 aaKnown RBP4.95□□□□□ -1.62
TMPRSS4-220ENST00000618855 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
TMPRSS4-220ENST00000618855 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
TMPRSS4-220ENST00000618855 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
TMPRSS4-220ENST00000618855 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
TMPRSS4-220ENST00000618855 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
TMPRSS4-220ENST00000618855 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.62
TMPRSS4-220ENST00000618855 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
TMPRSS4-220ENST00000618855 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
TMPRSS4-220ENST00000618855 KRTAP17-1Q9BYP8 105 aa4.82□□□□□ -1.64
TMPRSS4-220ENST00000618855 RYR2Q92736 4967 aa4.82□□□□□ -1.64
TMPRSS4-220ENST00000618855 M0QZ58 72 aa4.82□□□□□ -1.64
TMPRSS4-220ENST00000618855 XP32Q5T750 250 aa4.81□□□□□ -1.64
TMPRSS4-220ENST00000618855 KRTAP10-8P60410 259 aa4.81□□□□□ -1.64
TMPRSS4-220ENST00000618855 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
TMPRSS4-220ENST00000618855 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
TMPRSS4-220ENST00000618855 R4GN34 69 aa4.8□□□□□ -1.64
TMPRSS4-220ENST00000618855 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
TMPRSS4-220ENST00000618855 LRP2P98164 4655 aa4.79□□□□□ -1.64
TMPRSS4-220ENST00000618855 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
TMPRSS4-220ENST00000618855 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
TMPRSS4-220ENST00000618855 M0R2T5 61 aa4.77□□□□□ -1.65
TMPRSS4-220ENST00000618855 PKD1P98161 4303 aa4.74□□□□□ -1.65
TMPRSS4-220ENST00000618855 MUC2Q02817 5179 aa4.73□□□□□ -1.65
TMPRSS4-220ENST00000618855 PLAC4Q8WY50 150 aa4.72□□□□□ -1.65
TMPRSS4-220ENST00000618855 CAMK2N1Q7Z7J9 78 aa4.71□□□□□ -1.66
TMPRSS4-220ENST00000618855 HSPG2P98160 4391 aa4.7□□□□□ -1.66
TMPRSS4-220ENST00000618855 HERC2O95714 4834 aa4.7□□□□□ -1.66
TMPRSS4-220ENST00000618855 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
TMPRSS4-220ENST00000618855 LPAP08519 4548 aa4.69□□□□□ -1.66
TMPRSS4-220ENST00000618855 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
TMPRSS4-220ENST00000618855 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
TMPRSS4-220ENST00000618855 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
TMPRSS4-220ENST00000618855 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
TMPRSS4-220ENST00000618855 HERC1Q15751 4861 aa4.6□□□□□ -1.67
TMPRSS4-220ENST00000618855 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
TMPRSS4-220ENST00000618855 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
TMPRSS4-220ENST00000618855 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
TMPRSS4-220ENST00000618855 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
TMPRSS4-220ENST00000618855 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
TMPRSS4-220ENST00000618855 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
TMPRSS4-220ENST00000618855 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
TMPRSS4-220ENST00000618855 TNP1P09430 55 aa4.39□□□□□ -1.71
TMPRSS4-220ENST00000618855 TNXBP22105 4242 aa4.34□□□□□ -1.71
TMPRSS4-220ENST00000618855 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
TMPRSS4-220ENST00000618855 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
TMPRSS4-220ENST00000618855 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
TMPRSS4-220ENST00000618855 USH2AO75445 5202 aa4.12□□□□□ -1.75
TMPRSS4-220ENST00000618855 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
TMPRSS4-220ENST00000618855 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
TMPRSS4-220ENST00000618855 LCE3AQ5TA76 89 aa4□□□□□ -1.77
TMPRSS4-220ENST00000618855 MUC17Q685J3 4493 aa4□□□□□ -1.77
TMPRSS4-220ENST00000618855 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
TMPRSS4-220ENST00000618855 MT1HP80294 61 aa3.99□□□□□ -1.77
TMPRSS4-220ENST00000618855 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
TMPRSS4-220ENST00000618855 MT1FP04733 61 aa3.94□□□□□ -1.78
TMPRSS4-220ENST00000618855 INE1O15225 51 aa3.93□□□□□ -1.78
TMPRSS4-220ENST00000618855 MT2AP02795 61 aa3.9□□□□□ -1.78
TMPRSS4-220ENST00000618855 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
TMPRSS4-220ENST00000618855 KMT2DO14686 5537 aa3.88□□□□□ -1.79
TMPRSS4-220ENST00000618855 KRTAP19-2Q3LHN2 52 aa3.86□□□□□ -1.79
TMPRSS4-220ENST00000618855 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
TMPRSS4-220ENST00000618855 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
TMPRSS4-220ENST00000618855 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
TMPRSS4-220ENST00000618855 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
TMPRSS4-220ENST00000618855 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
TMPRSS4-220ENST00000618855 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
TMPRSS4-220ENST00000618855 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
TMPRSS4-220ENST00000618855 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
TMPRSS4-220ENST00000618855 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
TMPRSS4-220ENST00000618855 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
TMPRSS4-220ENST00000618855 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
TMPRSS4-220ENST00000618855 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
TMPRSS4-220ENST00000618855 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
TMPRSS4-220ENST00000618855 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
TMPRSS4-220ENST00000618855 MT1BP07438 61 aa3.62□□□□□ -1.83
TMPRSS4-220ENST00000618855 LCE2BO14633 110 aa3.61□□□□□ -1.83
TMPRSS4-220ENST00000618855 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
TMPRSS4-220ENST00000618855 MT1XP80297 61 aa3.59□□□□□ -1.83
TMPRSS4-220ENST00000618855 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
TMPRSS4-220ENST00000618855 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
TMPRSS4-220ENST00000618855 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
TMPRSS4-220ENST00000618855 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
TMPRSS4-220ENST00000618855 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
TMPRSS4-220ENST00000618855 KRTAP19-8Q3LI54 63 aa3.52□□□□□ -1.85
TMPRSS4-220ENST00000618855 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
TMPRSS4-220ENST00000618855 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
TMPRSS4-220ENST00000618855 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
TMPRSS4-220ENST00000618855 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
TMPRSS4-220ENST00000618855 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms