RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
SEC22B-202ENST00000618538 DYNC1H1Q14204 4646 aaKnown RBP2.42□□□□□ -2.02
SEC22B-202ENST00000618538 A6NED7 52 aa2.41□□□□□ -2.02
SEC22B-202ENST00000618538 FAT1Q14517 4588 aa2.41□□□□□ -2.02
SEC22B-202ENST00000618538 CDC42SE1Q9NRR8 79 aa2.41□□□□□ -2.02
SEC22B-202ENST00000618538 A6NN06 94 aa2.4□□□□□ -2.03
SEC22B-202ENST00000618538 PMAIP1Q13794 54 aa2.4□□□□□ -2.03
SEC22B-202ENST00000618538 SPTSSBQ8NFR3 76 aa2.4□□□□□ -2.03
SEC22B-202ENST00000618538 SEC61BP60468 96 aaKnown RBP2.39□□□□□ -2.03
SEC22B-202ENST00000618538 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
SEC22B-202ENST00000618538 ACYP2P14621 99 aa2.38□□□□□ -2.03
SEC22B-202ENST00000618538 ATP11AUNQ6ZP68 121 aa2.38□□□□□ -2.03
SEC22B-202ENST00000618538 IGKV2D-30A0A075B6S6 120 aa2.38□□□□□ -2.03
SEC22B-202ENST00000618538 PKHD1L1Q86WI1 4243 aa2.38□□□□□ -2.03
SEC22B-202ENST00000618538 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
SEC22B-202ENST00000618538 TYMSOSQ8TAI1 123 aa2.37□□□□□ -2.03
SEC22B-202ENST00000618538 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
SEC22B-202ENST00000618538 SMR3BP02814 79 aaPredicted RBP2.36□□□□□ -2.03
SEC22B-202ENST00000618538 SPINK1P00995 79 aa2.36□□□□□ -2.03
SEC22B-202ENST00000618538 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
SEC22B-202ENST00000618538 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
SEC22B-202ENST00000618538 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
SEC22B-202ENST00000618538 RYR2Q92736 4967 aa2.35□□□□□ -2.03
SEC22B-202ENST00000618538 A0A1B0GVY2 172 aa2.34□□□□□ -2.03
SEC22B-202ENST00000618538 SEC61GP60059 68 aa2.34□□□□□ -2.04
SEC22B-202ENST00000618538 C7orf65Q6ZTY9 151 aa2.34□□□□□ -2.04
SEC22B-202ENST00000618538 A0A1B0GU69 56 aa2.33□□□□□ -2.04
SEC22B-202ENST00000618538 C9orf92A6NGG3 77 aa2.33□□□□□ -2.04
SEC22B-202ENST00000618538 FLG2Q5D862 2391 aaPredicted RBP2.33□□□□□ -2.04
SEC22B-202ENST00000618538 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
SEC22B-202ENST00000618538 RPS29P62273 56 aaKnown RBP2.33□□□□□ -2.04
SEC22B-202ENST00000618538 SPATA8Q6RVD6 105 aa2.32□□□□□ -2.04
SEC22B-202ENST00000618538 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
SEC22B-202ENST00000618538 RBM12B-AS1Q9P1G2 102 aa2.32□□□□□ -2.04
SEC22B-202ENST00000618538 A8MUU9 505 aa2.32□□□□□ -2.04
SEC22B-202ENST00000618538 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
SEC22B-202ENST00000618538 PRAC1Q96KF2 57 aa2.31□□□□□ -2.04
SEC22B-202ENST00000618538 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
SEC22B-202ENST00000618538 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SEC22B-202ENST00000618538 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
SEC22B-202ENST00000618538 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
SEC22B-202ENST00000618538 HSPG2P98160 4391 aa2.29□□□□□ -2.04
SEC22B-202ENST00000618538 TNXBP22105 4242 aa2.29□□□□□ -2.04
SEC22B-202ENST00000618538 UQCR11O14957 56 aa2.29□□□□□ -2.04
SEC22B-202ENST00000618538 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
SEC22B-202ENST00000618538 H0YAA0 97 aa2.27□□□□□ -2.05
SEC22B-202ENST00000618538 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SEC22B-202ENST00000618538 RYR3Q15413 4870 aa2.26□□□□□ -2.05
SEC22B-202ENST00000618538 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
SEC22B-202ENST00000618538 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
SEC22B-202ENST00000618538 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
SEC22B-202ENST00000618538 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
SEC22B-202ENST00000618538 COX6B2Q6YFQ2 88 aa2.23□□□□□ -2.05
SEC22B-202ENST00000618538 RYR1P21817 5038 aa2.23□□□□□ -2.05
SEC22B-202ENST00000618538 H1FX-AS1Q4G0G2 97 aa2.22□□□□□ -2.05
SEC22B-202ENST00000618538 A0A1B0GU33 70 aa2.21□□□□□ -2.06
SEC22B-202ENST00000618538 Q5VSD8 79 aa2.21□□□□□ -2.06
SEC22B-202ENST00000618538 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
SEC22B-202ENST00000618538 LPAP08519 4548 aa2.21□□□□□ -2.06
SEC22B-202ENST00000618538 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
SEC22B-202ENST00000618538 RPL37P61927 97 aaKnown RBP2.2□□□□□ -2.06
SEC22B-202ENST00000618538 MT1HL1P0DM35 61 aa2.19□□□□□ -2.06
SEC22B-202ENST00000618538 LRP2P98164 4655 aa2.19□□□□□ -2.06
SEC22B-202ENST00000618538 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SEC22B-202ENST00000618538 EPPK1P58107 5090 aaKnown RBP2.18□□□□□ -2.06
SEC22B-202ENST00000618538 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
SEC22B-202ENST00000618538 P0C880 135 aa2.16□□□□□ -2.06
SEC22B-202ENST00000618538 ABCA13Q86UQ4 5058 aa2.15□□□□□ -2.06
SEC22B-202ENST00000618538 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
SEC22B-202ENST00000618538 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
SEC22B-202ENST00000618538 S4R3F8 94 aa2.14□□□□□ -2.07
SEC22B-202ENST00000618538 A0A0D9SG42 100 aa2.13□□□□□ -2.07
SEC22B-202ENST00000618538 PCLOQ9Y6V0 5065 aa2.12□□□□□ -2.07
SEC22B-202ENST00000618538 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
SEC22B-202ENST00000618538 TPRXLQ17RH7 258 aa2.1□□□□□ -2.07
SEC22B-202ENST00000618538 ROMO1P60602 79 aa2.09□□□□□ -2.07
SEC22B-202ENST00000618538 KRTAP12-1P59990 96 aa2.09□□□□□ -2.08
SEC22B-202ENST00000618538 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
SEC22B-202ENST00000618538 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
SEC22B-202ENST00000618538 MUC17Q685J3 4493 aa2.08□□□□□ -2.08
SEC22B-202ENST00000618538 K7ERS5 55 aa2.07□□□□□ -2.08
SEC22B-202ENST00000618538 MT3P25713 68 aa2.05□□□□□ -2.08
SEC22B-202ENST00000618538 KRTAP19-2Q3LHN2 52 aa2.05□□□□□ -2.08
SEC22B-202ENST00000618538 HERC2O95714 4834 aa2.04□□□□□ -2.08
SEC22B-202ENST00000618538 UBR4Q5T4S7 5183 aa2.03□□□□□ -2.08
SEC22B-202ENST00000618538 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
SEC22B-202ENST00000618538 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
SEC22B-202ENST00000618538 MUC2Q02817 5179 aa2.02□□□□□ -2.09
SEC22B-202ENST00000618538 M0QZ58 72 aa2.02□□□□□ -2.09
SEC22B-202ENST00000618538 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
SEC22B-202ENST00000618538 KRTAP10-5P60370 271 aa1.98□□□□□ -2.09
SEC22B-202ENST00000618538 HERC1Q15751 4861 aa1.97□□□□□ -2.09
SEC22B-202ENST00000618538 R4GN34 69 aa1.97□□□□□ -2.09
SEC22B-202ENST00000618538 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
SEC22B-202ENST00000618538 FLGP20930 4061 aaPredicted RBP1.97□□□□□ -2.09
SEC22B-202ENST00000618538 HMCN2Q8NDA2 5059 aa1.94□□□□□ -2.1
SEC22B-202ENST00000618538 FAT4Q6V0I7 4981 aa1.94□□□□□ -2.1
SEC22B-202ENST00000618538 NDUFAF8A1L188 74 aa1.93□□□□□ -2.1
SEC22B-202ENST00000618538 RNF213Q63HN8 5207 aa1.87□□□□□ -2.11
SEC22B-202ENST00000618538 CAMK2N1Q7Z7J9 78 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms