RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FAM236AA0A1B0GUQ0 79 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 FAM236BA0A1B0GV22 79 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 CCDC179H3BU77 68 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 COL5A1-AS1Q5SY13 56 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 C8orf17Q9NRJ1 99 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 MT1XP80297 61 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
SNCA-213ENST00000618500 A0A0B4J2C4 111 aa1.92□□□□□ -2.1
SNCA-213ENST00000618500 K7ERJ3 54 aa1.92□□□□□ -2.1
SNCA-213ENST00000618500 CXCL6P80162 114 aa1.92□□□□□ -2.1
SNCA-213ENST00000618500 C7orf65Q6ZTY9 151 aa1.92□□□□□ -2.1
SNCA-213ENST00000618500 J3QR89 54 aa1.92□□□□□ -2.1
SNCA-213ENST00000618500 COA6Q5JTJ3 125 aaKnown RBP1.92□□□□□ -2.1
SNCA-213ENST00000618500 H0YAA0 97 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 TRACP01848 142 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 NDUFB1O75438 58 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 HSD52Q0P140 79 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 FABP2P12104 132 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 RPS28P62857 69 aaKnown RBP1.91□□□□□ -2.1
SNCA-213ENST00000618500 SPATA45Q537H7 98 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 S4R3F8 94 aa1.91□□□□□ -2.1
SNCA-213ENST00000618500 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.1
SNCA-213ENST00000618500 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
SNCA-213ENST00000618500 TMEM256-PLSCR3K7ERE1 68 aa1.9□□□□□ -2.11
SNCA-213ENST00000618500 MP68P56378 58 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 IMUPQ9GZP8 106 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 A8MUN3 132 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 CCKP06307 115 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 MRPL34Q9BQ48 92 aaKnown RBP1.89□□□□□ -2.11
SNCA-213ENST00000618500 ORMDL1Q9P0S3 153 aa1.89□□□□□ -2.11
SNCA-213ENST00000618500 VAMP8Q9BV40 100 aa1.88□□□□□ -2.11
SNCA-213ENST00000618500 MMP24-AS1A0A0U1RRL7 71 aa1.88□□□□□ -2.11
SNCA-213ENST00000618500 TAX1BP3O14907 124 aa1.88□□□□□ -2.11
SNCA-213ENST00000618500 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
SNCA-213ENST00000618500 PSMB2P49721 201 aa1.88□□□□□ -2.11
SNCA-213ENST00000618500 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SNCA-213ENST00000618500 SCGB1C2P0DMR2 95 aa1.87□□□□□ -2.11
SNCA-213ENST00000618500 MT3P25713 68 aa1.87□□□□□ -2.11
SNCA-213ENST00000618500 Q6ZQT0 140 aa1.87□□□□□ -2.11
SNCA-213ENST00000618500 DEFB116Q30KQ4 102 aa1.87□□□□□ -2.11
SNCA-213ENST00000618500 ETDBQ3ZM63 59 aa1.86□□□□□ -2.11
SNCA-213ENST00000618500 LCA10Q71F78 164 aa1.86□□□□□ -2.11
SNCA-213ENST00000618500 HIGD1BQ9P298 99 aa1.86□□□□□ -2.11
SNCA-213ENST00000618500 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SNCA-213ENST00000618500 LOC110117498A0A087WWA1 95 aa1.85□□□□□ -2.11
SNCA-213ENST00000618500 PSPHP1O15172 72 aa1.85□□□□□ -2.11
SNCA-213ENST00000618500 HIST1H4GQ99525 98 aa1.85□□□□□ -2.11
SNCA-213ENST00000618500 KTN1-AS1Q86SY8 53 aa1.85□□□□□ -2.11
SNCA-213ENST00000618500 MT-ATP8P03928 68 aa1.84□□□□□ -2.11
SNCA-213ENST00000618500 DNAL4O96015 105 aa1.84□□□□□ -2.12
SNCA-213ENST00000618500 PDE6GP18545 87 aa1.83□□□□□ -2.12
SNCA-213ENST00000618500 FXYD2P54710 66 aa1.83□□□□□ -2.12
SNCA-213ENST00000618500 RBM3P98179 157 aaKnown RBP1.83□□□□□ -2.12
SNCA-213ENST00000618500 COX8AP10176 69 aa1.83□□□□□ -2.12
SNCA-213ENST00000618500 Q5W150 140 aa1.83□□□□□ -2.12
SNCA-213ENST00000618500 hDV103S1A0JD37 113 aa1.83□□□□□ -2.12
SNCA-213ENST00000618500 PRO1854Q9UHT4 67 aa1.83□□□□□ -2.12
SNCA-213ENST00000618500 CEND1Q8N111 149 aa1.82□□□□□ -2.12
SNCA-213ENST00000618500 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
SNCA-213ENST00000618500 A6NED7 52 aa1.81□□□□□ -2.12
SNCA-213ENST00000618500 C1orf64Q8NEQ6 169 aa1.81□□□□□ -2.12
SNCA-213ENST00000618500 SPCS1Q9Y6A9 102 aa1.81□□□□□ -2.12
SNCA-213ENST00000618500 UQCR10Q9UDW1 63 aa1.8□□□□□ -2.12
SNCA-213ENST00000618500 LINC01554Q52M75 96 aa1.8□□□□□ -2.12
SNCA-213ENST00000618500 JMJD7-PLA2G4BH0Y9G9 81 aa1.8□□□□□ -2.12
SNCA-213ENST00000618500 CYSTM1Q9H1C7 97 aa1.8□□□□□ -2.12
SNCA-213ENST00000618500 COX6CP09669 75 aa1.78□□□□□ -2.12
SNCA-213ENST00000618500 H3BT86 120 aa1.78□□□□□ -2.12
SNCA-213ENST00000618500 TMEM258P61165 79 aa1.78□□□□□ -2.12
SNCA-213ENST00000618500 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
SNCA-213ENST00000618500 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
SNCA-213ENST00000618500 UQCRQO14949 82 aa1.77□□□□□ -2.13
SNCA-213ENST00000618500 A0A1W2PPM0 123 aa1.76□□□□□ -2.13
SNCA-213ENST00000618500 A0A087WVE0 104 aa1.76□□□□□ -2.13
SNCA-213ENST00000618500 HCG22E2RYF7 251 aa1.75□□□□□ -2.13
SNCA-213ENST00000618500 A8MU10 97 aa1.75□□□□□ -2.13
SNCA-213ENST00000618500 K7EP34 96 aa1.75□□□□□ -2.13
SNCA-213ENST00000618500 NREPQ16612 68 aa1.75□□□□□ -2.13
SNCA-213ENST00000618500 CASC2Q6XLA1 102 aa1.74□□□□□ -2.13
SNCA-213ENST00000618500 C20orf197Q8N268 126 aa1.74□□□□□ -2.13
SNCA-213ENST00000618500 MT1EP04732 61 aa1.74□□□□□ -2.13
SNCA-213ENST00000618500 TP53AIP1Q9HCN2 124 aa1.74□□□□□ -2.13
SNCA-213ENST00000618500 BAALC-AS2P0C853 105 aa1.73□□□□□ -2.13
SNCA-213ENST00000618500 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
SNCA-213ENST00000618500 SPTSSBQ8NFR3 76 aa1.73□□□□□ -2.13
SNCA-213ENST00000618500 SERP1Q9Y6X1 66 aa1.73□□□□□ -2.13
SNCA-213ENST00000618500 F8W1H4 67 aa1.72□□□□□ -2.13
SNCA-213ENST00000618500 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
SNCA-213ENST00000618500 MT1GP13640 62 aa1.72□□□□□ -2.13
SNCA-213ENST00000618500 COX7CP15954 63 aa1.72□□□□□ -2.13
SNCA-213ENST00000618500 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
SNCA-213ENST00000618500 NDUFC1O43677 76 aa1.71□□□□□ -2.14
SNCA-213ENST00000618500 MT4P47944 62 aa1.71□□□□□ -2.14
SNCA-213ENST00000618500 PRO0461Q9UI25 63 aa1.71□□□□□ -2.14
SNCA-213ENST00000618500 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms