RNA–Protein interactions for RNA: ENST00000616430.1

PCDHGB6-202, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB6, Length 4,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-202ENST00000616430 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
PCDHGB6-202ENST00000616430 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
PCDHGB6-202ENST00000616430 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
PCDHGB6-202ENST00000616430 DNAH17Q9UFH2 4485 aa5.35□□□□□ -1.55
PCDHGB6-202ENST00000616430 HECTD4Q9Y4D8 3996 aa5.33□□□□□ -1.56
PCDHGB6-202ENST00000616430 DNAH2Q9P225 4427 aa5.33□□□□□ -1.56
PCDHGB6-202ENST00000616430 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
PCDHGB6-202ENST00000616430 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
PCDHGB6-202ENST00000616430 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
PCDHGB6-202ENST00000616430 KIAA1109Q2LD37 5005 aa5.31□□□□□ -1.56
PCDHGB6-202ENST00000616430 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
PCDHGB6-202ENST00000616430 DYNC2H1Q8NCM8 4307 aaKnown RBP5.31□□□□□ -1.56
PCDHGB6-202ENST00000616430 DNAH5Q8TE73 4624 aa5.29□□□□□ -1.56
PCDHGB6-202ENST00000616430 DNAH6Q9C0G6 4158 aa5.29□□□□□ -1.56
PCDHGB6-202ENST00000616430 HYDINQ4G0P3 5121 aa5.27□□□□□ -1.57
PCDHGB6-202ENST00000616430 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
PCDHGB6-202ENST00000616430 RYR3Q15413 4870 aa5.25□□□□□ -1.57
PCDHGB6-202ENST00000616430 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
PCDHGB6-202ENST00000616430 RYR1P21817 5038 aa5.24□□□□□ -1.57
PCDHGB6-202ENST00000616430 FAT1Q14517 4588 aa5.23□□□□□ -1.57
PCDHGB6-202ENST00000616430 DYNC1H1Q14204 4646 aaKnown RBP5.17□□□□□ -1.58
PCDHGB6-202ENST00000616430 KRTAP3-3Q9BYR6 98 aa5.17□□□□□ -1.58
PCDHGB6-202ENST00000616430 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
PCDHGB6-202ENST00000616430 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
PCDHGB6-202ENST00000616430 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
PCDHGB6-202ENST00000616430 VPS13BQ7Z7G8 4022 aa5.15□□□□□ -1.58
PCDHGB6-202ENST00000616430 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
PCDHGB6-202ENST00000616430 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
PCDHGB6-202ENST00000616430 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
PCDHGB6-202ENST00000616430 RYR2Q92736 4967 aa5.1□□□□□ -1.59
PCDHGB6-202ENST00000616430 PKHD1P08F94 4074 aa5.05□□□□□ -1.6
PCDHGB6-202ENST00000616430 HERC2O95714 4834 aa5.03□□□□□ -1.6
PCDHGB6-202ENST00000616430 EPPK1P58107 5090 aaKnown RBP5.03□□□□□ -1.6
PCDHGB6-202ENST00000616430 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
PCDHGB6-202ENST00000616430 FAT2Q9NYQ8 4349 aa5.01□□□□□ -1.61
PCDHGB6-202ENST00000616430 PKD1P98161 4303 aa5□□□□□ -1.61
PCDHGB6-202ENST00000616430 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
PCDHGB6-202ENST00000616430 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
PCDHGB6-202ENST00000616430 APOBP04114 4563 aaKnown RBP4.97□□□□□ -1.61
PCDHGB6-202ENST00000616430 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
PCDHGB6-202ENST00000616430 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
PCDHGB6-202ENST00000616430 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
PCDHGB6-202ENST00000616430 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
PCDHGB6-202ENST00000616430 PCLOQ9Y6V0 5065 aa4.81□□□□□ -1.64
PCDHGB6-202ENST00000616430 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
PCDHGB6-202ENST00000616430 HSPG2P98160 4391 aa4.77□□□□□ -1.65
PCDHGB6-202ENST00000616430 LRP2P98164 4655 aa4.76□□□□□ -1.65
PCDHGB6-202ENST00000616430 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.66
PCDHGB6-202ENST00000616430 HERC1Q15751 4861 aa4.69□□□□□ -1.66
PCDHGB6-202ENST00000616430 KRTAP4-1Q9BYQ7 146 aa4.64□□□□□ -1.67
PCDHGB6-202ENST00000616430 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
PCDHGB6-202ENST00000616430 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
PCDHGB6-202ENST00000616430 TNXBP22105 4242 aa4.61□□□□□ -1.67
PCDHGB6-202ENST00000616430 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
PCDHGB6-202ENST00000616430 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
PCDHGB6-202ENST00000616430 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
PCDHGB6-202ENST00000616430 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
PCDHGB6-202ENST00000616430 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
PCDHGB6-202ENST00000616430 LPAP08519 4548 aa4.55□□□□□ -1.68
PCDHGB6-202ENST00000616430 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
PCDHGB6-202ENST00000616430 INE1O15225 51 aa4.51□□□□□ -1.69
PCDHGB6-202ENST00000616430 MT1HP80294 61 aa4.4□□□□□ -1.7
PCDHGB6-202ENST00000616430 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
PCDHGB6-202ENST00000616430 MUC2Q02817 5179 aa4.35□□□□□ -1.71
PCDHGB6-202ENST00000616430 MT2AP02795 61 aa4.35□□□□□ -1.71
PCDHGB6-202ENST00000616430 MT1FP04733 61 aa4.3□□□□□ -1.72
PCDHGB6-202ENST00000616430 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
PCDHGB6-202ENST00000616430 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
PCDHGB6-202ENST00000616430 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
PCDHGB6-202ENST00000616430 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
PCDHGB6-202ENST00000616430 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
PCDHGB6-202ENST00000616430 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
PCDHGB6-202ENST00000616430 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
PCDHGB6-202ENST00000616430 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
PCDHGB6-202ENST00000616430 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
PCDHGB6-202ENST00000616430 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
PCDHGB6-202ENST00000616430 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
PCDHGB6-202ENST00000616430 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
PCDHGB6-202ENST00000616430 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
PCDHGB6-202ENST00000616430 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
PCDHGB6-202ENST00000616430 MT1XP80297 61 aa4.03□□□□□ -1.76
PCDHGB6-202ENST00000616430 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
PCDHGB6-202ENST00000616430 MT1BP07438 61 aa4□□□□□ -1.77
PCDHGB6-202ENST00000616430 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
PCDHGB6-202ENST00000616430 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
PCDHGB6-202ENST00000616430 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
PCDHGB6-202ENST00000616430 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
PCDHGB6-202ENST00000616430 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
PCDHGB6-202ENST00000616430 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
PCDHGB6-202ENST00000616430 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
PCDHGB6-202ENST00000616430 LCE2BO14633 110 aa3.87□□□□□ -1.79
PCDHGB6-202ENST00000616430 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
PCDHGB6-202ENST00000616430 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
PCDHGB6-202ENST00000616430 USH2AO75445 5202 aa3.84□□□□□ -1.79
PCDHGB6-202ENST00000616430 MT1GP13640 62 aa3.72□□□□□ -1.81
PCDHGB6-202ENST00000616430 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
PCDHGB6-202ENST00000616430 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
PCDHGB6-202ENST00000616430 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
PCDHGB6-202ENST00000616430 SPRR2EP22531 72 aa3.7□□□□□ -1.82
PCDHGB6-202ENST00000616430 SPRR2BP35325 72 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms