RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 XP32Q5T750 250 aa7.72□□□□□ -1.17
CDKN1A-208ENST00000615513 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
CDKN1A-208ENST00000615513 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
CDKN1A-208ENST00000615513 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
CDKN1A-208ENST00000615513 EPPK1P58107 5090 aaKnown RBP7.64□□□□□ -1.19
CDKN1A-208ENST00000615513 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
CDKN1A-208ENST00000615513 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
CDKN1A-208ENST00000615513 H0YAA0 97 aa7.58□□□□□ -1.2
CDKN1A-208ENST00000615513 A0A1B0GU33 70 aa7.57□□□□□ -1.2
CDKN1A-208ENST00000615513 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
CDKN1A-208ENST00000615513 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
CDKN1A-208ENST00000615513 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
CDKN1A-208ENST00000615513 S4R3F8 94 aa7.49□□□□□ -1.21
CDKN1A-208ENST00000615513 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
CDKN1A-208ENST00000615513 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
CDKN1A-208ENST00000615513 BIRC6Q9NR09 4857 aa7.4□□□□□ -1.23
CDKN1A-208ENST00000615513 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
CDKN1A-208ENST00000615513 K7ERS5 55 aa7.38□□□□□ -1.23
CDKN1A-208ENST00000615513 LRP2P98164 4655 aa7.37□□□□□ -1.23
CDKN1A-208ENST00000615513 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
CDKN1A-208ENST00000615513 LPAP08519 4548 aa7.32□□□□□ -1.24
CDKN1A-208ENST00000615513 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
CDKN1A-208ENST00000615513 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
CDKN1A-208ENST00000615513 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
CDKN1A-208ENST00000615513 P0C880 135 aa7.25□□□□□ -1.25
CDKN1A-208ENST00000615513 J3QL48 77 aa7.24□□□□□ -1.25
CDKN1A-208ENST00000615513 HERC2O95714 4834 aa7.24□□□□□ -1.25
CDKN1A-208ENST00000615513 ROMO1P60602 79 aa7.22□□□□□ -1.25
CDKN1A-208ENST00000615513 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
CDKN1A-208ENST00000615513 A0A0D9SG42 100 aa7.16□□□□□ -1.26
CDKN1A-208ENST00000615513 H3BS24 57 aa7.12□□□□□ -1.27
CDKN1A-208ENST00000615513 M0QZ58 72 aa7.12□□□□□ -1.27
CDKN1A-208ENST00000615513 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
CDKN1A-208ENST00000615513 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.28
CDKN1A-208ENST00000615513 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
CDKN1A-208ENST00000615513 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
CDKN1A-208ENST00000615513 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
CDKN1A-208ENST00000615513 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
CDKN1A-208ENST00000615513 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
CDKN1A-208ENST00000615513 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
CDKN1A-208ENST00000615513 R4GN34 69 aa6.94□□□□□ -1.3
CDKN1A-208ENST00000615513 HERC1Q15751 4861 aa6.84□□□□□ -1.32
CDKN1A-208ENST00000615513 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
CDKN1A-208ENST00000615513 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
CDKN1A-208ENST00000615513 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
CDKN1A-208ENST00000615513 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
CDKN1A-208ENST00000615513 MUC2Q02817 5179 aa6.75□□□□□ -1.33
CDKN1A-208ENST00000615513 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
CDKN1A-208ENST00000615513 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
CDKN1A-208ENST00000615513 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
CDKN1A-208ENST00000615513 MT1HP80294 61 aa6.46□□□□□ -1.37
CDKN1A-208ENST00000615513 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
CDKN1A-208ENST00000615513 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
CDKN1A-208ENST00000615513 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
CDKN1A-208ENST00000615513 M0R2T5 61 aa6.44□□□□□ -1.38
CDKN1A-208ENST00000615513 UBR4Q5T4S7 5183 aa6.43□□□□□ -1.38
CDKN1A-208ENST00000615513 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
CDKN1A-208ENST00000615513 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
CDKN1A-208ENST00000615513 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
CDKN1A-208ENST00000615513 MT2AP02795 61 aa6.32□□□□□ -1.4
CDKN1A-208ENST00000615513 TNP1P09430 55 aa6.32□□□□□ -1.4
CDKN1A-208ENST00000615513 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
CDKN1A-208ENST00000615513 MT1FP04733 61 aa6.29□□□□□ -1.4
CDKN1A-208ENST00000615513 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
CDKN1A-208ENST00000615513 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
CDKN1A-208ENST00000615513 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
CDKN1A-208ENST00000615513 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
CDKN1A-208ENST00000615513 MT1BP07438 61 aa6.07□□□□□ -1.44
CDKN1A-208ENST00000615513 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
CDKN1A-208ENST00000615513 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
CDKN1A-208ENST00000615513 MT1XP80297 61 aa5.98□□□□□ -1.45
CDKN1A-208ENST00000615513 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
CDKN1A-208ENST00000615513 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
CDKN1A-208ENST00000615513 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
CDKN1A-208ENST00000615513 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
CDKN1A-208ENST00000615513 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
CDKN1A-208ENST00000615513 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
CDKN1A-208ENST00000615513 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
CDKN1A-208ENST00000615513 LCE2BO14633 110 aa5.8□□□□□ -1.48
CDKN1A-208ENST00000615513 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
CDKN1A-208ENST00000615513 KRTAP12-3P60328 96 aa5.71□□□□□ -1.5
CDKN1A-208ENST00000615513 USH2AO75445 5202 aa5.55□□□□□ -1.52
CDKN1A-208ENST00000615513 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
CDKN1A-208ENST00000615513 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
CDKN1A-208ENST00000615513 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
CDKN1A-208ENST00000615513 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
CDKN1A-208ENST00000615513 INE1O15225 51 aa5.38□□□□□ -1.55
CDKN1A-208ENST00000615513 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
CDKN1A-208ENST00000615513 KMT2DO14686 5537 aa5.37□□□□□ -1.55
CDKN1A-208ENST00000615513 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
CDKN1A-208ENST00000615513 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
CDKN1A-208ENST00000615513 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
CDKN1A-208ENST00000615513 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
CDKN1A-208ENST00000615513 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
CDKN1A-208ENST00000615513 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
CDKN1A-208ENST00000615513 MT1EP04732 61 aa5.21□□□□□ -1.58
CDKN1A-208ENST00000615513 MT1LQ93083 61 aa5.18□□□□□ -1.58
CDKN1A-208ENST00000615513 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
CDKN1A-208ENST00000615513 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CDKN1A-208ENST00000615513 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms