RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
FOXN3-219ENST00000615335 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
FOXN3-219ENST00000615335 TNXBP22105 4242 aa7.3□□□□□ -1.24
FOXN3-219ENST00000615335 SPINK1P00995 79 aa7.28□□□□□ -1.24
FOXN3-219ENST00000615335 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
FOXN3-219ENST00000615335 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
FOXN3-219ENST00000615335 IGKV2D-30A0A075B6S6 120 aa7.23□□□□□ -1.25
FOXN3-219ENST00000615335 H0YAA0 97 aa7.23□□□□□ -1.25
FOXN3-219ENST00000615335 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
FOXN3-219ENST00000615335 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
FOXN3-219ENST00000615335 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
FOXN3-219ENST00000615335 J3QL48 77 aa7.2□□□□□ -1.26
FOXN3-219ENST00000615335 K7ERS5 55 aa7.19□□□□□ -1.26
FOXN3-219ENST00000615335 PCLOQ9Y6V0 5065 aa7.19□□□□□ -1.26
FOXN3-219ENST00000615335 A0A1B0GU33 70 aa7.14□□□□□ -1.27
FOXN3-219ENST00000615335 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
FOXN3-219ENST00000615335 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
FOXN3-219ENST00000615335 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
FOXN3-219ENST00000615335 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
FOXN3-219ENST00000615335 CRIPTQ9P021 101 aa7.07□□□□□ -1.28
FOXN3-219ENST00000615335 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
FOXN3-219ENST00000615335 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
FOXN3-219ENST00000615335 HERC1Q15751 4861 aa6.98□□□□□ -1.29
FOXN3-219ENST00000615335 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
FOXN3-219ENST00000615335 LPAP08519 4548 aa6.89□□□□□ -1.31
FOXN3-219ENST00000615335 RPL37P61927 97 aaKnown RBP6.87□□□□□ -1.31
FOXN3-219ENST00000615335 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
FOXN3-219ENST00000615335 XP32Q5T750 250 aa6.84□□□□□ -1.31
FOXN3-219ENST00000615335 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
FOXN3-219ENST00000615335 LRP2P98164 4655 aa6.81□□□□□ -1.32
FOXN3-219ENST00000615335 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
FOXN3-219ENST00000615335 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
FOXN3-219ENST00000615335 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
FOXN3-219ENST00000615335 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
FOXN3-219ENST00000615335 A0A0D9SG42 100 aa6.62□□□□□ -1.35
FOXN3-219ENST00000615335 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
FOXN3-219ENST00000615335 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-219ENST00000615335 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
FOXN3-219ENST00000615335 S4R3F8 94 aa6.58□□□□□ -1.36
FOXN3-219ENST00000615335 MUC17Q685J3 4493 aa6.57□□□□□ -1.36
FOXN3-219ENST00000615335 MUC2Q02817 5179 aa6.57□□□□□ -1.36
FOXN3-219ENST00000615335 KRTAP4-1Q9BYQ7 146 aa6.52□□□□□ -1.36
FOXN3-219ENST00000615335 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
FOXN3-219ENST00000615335 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
FOXN3-219ENST00000615335 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
FOXN3-219ENST00000615335 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
FOXN3-219ENST00000615335 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
FOXN3-219ENST00000615335 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
FOXN3-219ENST00000615335 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
FOXN3-219ENST00000615335 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
FOXN3-219ENST00000615335 M0QZ58 72 aa6.26□□□□□ -1.41
FOXN3-219ENST00000615335 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
FOXN3-219ENST00000615335 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
FOXN3-219ENST00000615335 LCE2DQ5TA82 110 aaPredicted RBP6.2□□□□□ -1.42
FOXN3-219ENST00000615335 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
FOXN3-219ENST00000615335 MT1HP80294 61 aa6.13□□□□□ -1.43
FOXN3-219ENST00000615335 M0R2T5 61 aa6.12□□□□□ -1.43
FOXN3-219ENST00000615335 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
FOXN3-219ENST00000615335 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
FOXN3-219ENST00000615335 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
FOXN3-219ENST00000615335 R4GN34 69 aa6□□□□□ -1.45
FOXN3-219ENST00000615335 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
FOXN3-219ENST00000615335 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
FOXN3-219ENST00000615335 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
FOXN3-219ENST00000615335 MT2AP02795 61 aa5.84□□□□□ -1.47
FOXN3-219ENST00000615335 KRTAP10-10P60014 251 aa5.82□□□□□ -1.48
FOXN3-219ENST00000615335 INE1O15225 51 aa5.82□□□□□ -1.48
FOXN3-219ENST00000615335 MT1FP04733 61 aa5.8□□□□□ -1.48
FOXN3-219ENST00000615335 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
FOXN3-219ENST00000615335 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
FOXN3-219ENST00000615335 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
FOXN3-219ENST00000615335 SPRR2GQ9BYE4 73 aa5.63□□□□□ -1.51
FOXN3-219ENST00000615335 TNP1P09430 55 aa5.59□□□□□ -1.51
FOXN3-219ENST00000615335 LCE2BO14633 110 aa5.54□□□□□ -1.52
FOXN3-219ENST00000615335 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
FOXN3-219ENST00000615335 USH2AO75445 5202 aa5.48□□□□□ -1.53
FOXN3-219ENST00000615335 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.54
FOXN3-219ENST00000615335 MT1BP07438 61 aa5.45□□□□□ -1.54
FOXN3-219ENST00000615335 KRTAP9-2Q9BYQ4 174 aa5.42□□□□□ -1.54
FOXN3-219ENST00000615335 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
FOXN3-219ENST00000615335 MT1XP80297 61 aa5.24□□□□□ -1.57
FOXN3-219ENST00000615335 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
FOXN3-219ENST00000615335 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
FOXN3-219ENST00000615335 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
FOXN3-219ENST00000615335 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
FOXN3-219ENST00000615335 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
FOXN3-219ENST00000615335 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
FOXN3-219ENST00000615335 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
FOXN3-219ENST00000615335 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
FOXN3-219ENST00000615335 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
FOXN3-219ENST00000615335 KMT2DO14686 5537 aa4.98□□□□□ -1.61
FOXN3-219ENST00000615335 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
FOXN3-219ENST00000615335 MACF1Q9UPN3 7388 aaKnown RBP4.94□□□□□ -1.62
FOXN3-219ENST00000615335 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
FOXN3-219ENST00000615335 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
FOXN3-219ENST00000615335 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
FOXN3-219ENST00000615335 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
FOXN3-219ENST00000615335 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
FOXN3-219ENST00000615335 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
FOXN3-219ENST00000615335 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms