RNA–Protein interactions for RNA: ENST00000614461.4

RCC1L-202, Transcript of RCC1 like, humanhuman

TSL 1 (best) BASIC

Gene RCC1L, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-202ENST00000614461 UQCR11O14957 56 aa13.73□□□□□ -0.21
RCC1L-202ENST00000614461 MIR22HGQ0VDD5 57 aa13.71□□□□□ -0.22
RCC1L-202ENST00000614461 SPATA8Q6RVD6 105 aa13.71□□□□□ -0.22
RCC1L-202ENST00000614461 PRAC1Q96KF2 57 aa13.7□□□□□ -0.22
RCC1L-202ENST00000614461 LPAP08519 4548 aa13.63□□□□□ -0.23
RCC1L-202ENST00000614461 ADM2Q7Z4H4 148 aa13.63□□□□□ -0.23
RCC1L-202ENST00000614461 ABCA13Q86UQ4 5058 aa13.61□□□□□ -0.23
RCC1L-202ENST00000614461 KRTAP4-5Q9BYR2 181 aa13.59□□□□□ -0.23
RCC1L-202ENST00000614461 LRP2P98164 4655 aa13.58□□□□□ -0.23
RCC1L-202ENST00000614461 H0YAA0 97 aa13.45□□□□□ -0.26
RCC1L-202ENST00000614461 KRTAP3-3Q9BYR6 98 aa13.44□□□□□ -0.26
RCC1L-202ENST00000614461 LINC01554Q52M75 96 aa13.41□□□□□ -0.26
RCC1L-202ENST00000614461 A0A1B0GU33 70 aa13.4□□□□□ -0.26
RCC1L-202ENST00000614461 H1FX-AS1Q4G0G2 97 aa13.37□□□□□ -0.27
RCC1L-202ENST00000614461 TPRXLQ17RH7 258 aa13.33□□□□□ -0.28
RCC1L-202ENST00000614461 S4R3F8 94 aa13.3□□□□□ -0.28
RCC1L-202ENST00000614461 CSAG1Q6PB30 78 aa13.22□□□□□ -0.29
RCC1L-202ENST00000614461 KRTAP10-6P60371 365 aaPredicted RBP13.2□□□□□ -0.3
RCC1L-202ENST00000614461 HERC2O95714 4834 aa13.17□□□□□ -0.3
RCC1L-202ENST00000614461 KRTAP3-2Q9BYR7 98 aa13.14□□□□□ -0.31
RCC1L-202ENST00000614461 KRTAP13-4Q3LI77 160 aa13.07□□□□□ -0.32
RCC1L-202ENST00000614461 P0C880 135 aa13.04□□□□□ -0.32
RCC1L-202ENST00000614461 J3QL48 77 aa12.99□□□□□ -0.33
RCC1L-202ENST00000614461 A0A0D9SG42 100 aa12.94□□□□□ -0.34
RCC1L-202ENST00000614461 MUC17Q685J3 4493 aa12.94□□□□□ -0.34
RCC1L-202ENST00000614461 H3BS24 57 aa12.93□□□□□ -0.34
RCC1L-202ENST00000614461 BIRC6Q9NR09 4857 aa12.89□□□□□ -0.35
RCC1L-202ENST00000614461 KRTAP4-1Q9BYQ7 146 aa12.86□□□□□ -0.35
RCC1L-202ENST00000614461 SEC61BP60468 96 aaKnown RBP12.82□□□□□ -0.36
RCC1L-202ENST00000614461 K7ERS5 55 aa12.77□□□□□ -0.37
RCC1L-202ENST00000614461 KRTAP25-1Q3LHN0 102 aa12.76□□□□□ -0.37
RCC1L-202ENST00000614461 MUC2Q02817 5179 aa12.73□□□□□ -0.37
RCC1L-202ENST00000614461 HERC1Q15751 4861 aa12.65□□□□□ -0.38
RCC1L-202ENST00000614461 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
RCC1L-202ENST00000614461 CRIPTQ9P021 101 aa12.62□□□□□ -0.39
RCC1L-202ENST00000614461 KRTAP12-2P59991 146 aa12.59□□□□□ -0.39
RCC1L-202ENST00000614461 ROMO1P60602 79 aa12.58□□□□□ -0.4
RCC1L-202ENST00000614461 KRTAP19-2Q3LHN2 52 aa12.52□□□□□ -0.41
RCC1L-202ENST00000614461 SPINT4Q6UDR6 99 aa12.49□□□□□ -0.41
RCC1L-202ENST00000614461 KRTAP12-1P59990 96 aa12.48□□□□□ -0.41
RCC1L-202ENST00000614461 M0QZ58 72 aa12.45□□□□□ -0.42
RCC1L-202ENST00000614461 HMCN2Q8NDA2 5059 aa12.43□□□□□ -0.42
RCC1L-202ENST00000614461 LORP23490 312 aaPredicted RBP12.41□□□□□ -0.42
RCC1L-202ENST00000614461 R4GN34 69 aa12.33□□□□□ -0.44
RCC1L-202ENST00000614461 FLGP20930 4061 aaPredicted RBP12.25□□□□□ -0.45
RCC1L-202ENST00000614461 C10orf95Q9H7T3 257 aa12.21□□□□□ -0.46
RCC1L-202ENST00000614461 FAT4Q6V0I7 4981 aa12.13□□□□□ -0.47
RCC1L-202ENST00000614461 UBR4Q5T4S7 5183 aa12□□□□□ -0.49
RCC1L-202ENST00000614461 RNF213Q63HN8 5207 aa11.99□□□□□ -0.49
RCC1L-202ENST00000614461 LCE2CQ5TA81 110 aa11.92□□□□□ -0.5
RCC1L-202ENST00000614461 KRTAP15-1Q3LI76 137 aa11.77□□□□□ -0.52
RCC1L-202ENST00000614461 NDUFAF8A1L188 74 aa11.71□□□□□ -0.53
RCC1L-202ENST00000614461 CAMK2N1Q7Z7J9 78 aa11.67□□□□□ -0.54
RCC1L-202ENST00000614461 M0R2T5 61 aa11.62□□□□□ -0.55
RCC1L-202ENST00000614461 MT1HP80294 61 aa11.61□□□□□ -0.55
RCC1L-202ENST00000614461 KRTAP19-1Q8IUB9 90 aa11.42□□□□□ -0.58
RCC1L-202ENST00000614461 SPRR2GQ9BYE4 73 aa11.38□□□□□ -0.59
RCC1L-202ENST00000614461 MT1FP04733 61 aa11.36□□□□□ -0.59
RCC1L-202ENST00000614461 MT2AP02795 61 aa11.35□□□□□ -0.59
RCC1L-202ENST00000614461 KRTAP10-10P60014 251 aa11.3□□□□□ -0.6
RCC1L-202ENST00000614461 KRTAP9-8Q9BYQ0 159 aa11.29□□□□□ -0.6
RCC1L-202ENST00000614461 PLAC4Q8WY50 150 aa11.18□□□□□ -0.62
RCC1L-202ENST00000614461 TNP1P09430 55 aa11.13□□□□□ -0.63
RCC1L-202ENST00000614461 PP632Q6XCG6 107 aa11.08□□□□□ -0.64
RCC1L-202ENST00000614461 KRTAP19-8Q3LI54 63 aa10.92□□□□□ -0.66
RCC1L-202ENST00000614461 MT1BP07438 61 aa10.88□□□□□ -0.67
RCC1L-202ENST00000614461 KRTAP9-3Q9BYQ3 159 aa10.82□□□□□ -0.68
RCC1L-202ENST00000614461 KRTAP23-1A1A580 65 aa10.77□□□□□ -0.69
RCC1L-202ENST00000614461 KRTAP10-5P60370 271 aa10.73□□□□□ -0.69
RCC1L-202ENST00000614461 MT1XP80297 61 aa10.72□□□□□ -0.69
RCC1L-202ENST00000614461 LCE3AQ5TA76 89 aa10.7□□□□□ -0.7
RCC1L-202ENST00000614461 LUZP6Q538Z0 58 aa10.67□□□□□ -0.7
RCC1L-202ENST00000614461 USH2AO75445 5202 aa10.56□□□□□ -0.72
RCC1L-202ENST00000614461 A0A0A0MQY5 61 aa10.56□□□□□ -0.72
RCC1L-202ENST00000614461 LCE2BO14633 110 aa10.5□□□□□ -0.73
RCC1L-202ENST00000614461 LCE2AQ5TA79 106 aaPredicted RBP10.5□□□□□ -0.73
RCC1L-202ENST00000614461 KRTAP10-7P60409 375 aaPredicted RBP10.44□□□□□ -0.74
RCC1L-202ENST00000614461 KRTAP10-12P60413 245 aa10.36□□□□□ -0.75
RCC1L-202ENST00000614461 KRTAP8-1Q8IUC2 63 aa10.34□□□□□ -0.75
RCC1L-202ENST00000614461 SPRR5A0A1B0GTR4 108 aa10.27□□□□□ -0.77
RCC1L-202ENST00000614461 PRO2289Q9P1D8 64 aa10.25□□□□□ -0.77
RCC1L-202ENST00000614461 KMT2DO14686 5537 aa10.18□□□□□ -0.78
RCC1L-202ENST00000614461 KRTAP12-3P60328 96 aa10.16□□□□□ -0.78
RCC1L-202ENST00000614461 KRTAP4-8A0A0G2JLE6 195 aa9.93□□□□□ -0.82
RCC1L-202ENST00000614461 KRTAP4-8Q9BYQ9 185 aa9.93□□□□□ -0.82
RCC1L-202ENST00000614461 KRTAP19-5Q3LI72 72 aa9.92□□□□□ -0.82
RCC1L-202ENST00000614461 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
RCC1L-202ENST00000614461 SSPOA2VEC9 5147 aa9.81□□□□□ -0.84
RCC1L-202ENST00000614461 KRTAP19-7Q3SYF9 63 aa9.56□□□□□ -0.88
RCC1L-202ENST00000614461 LCE3CQ5T5A8 94 aa9.53□□□□□ -0.88
RCC1L-202ENST00000614461 KRTAP19-6Q3LI70 58 aa9.43□□□□□ -0.9
RCC1L-202ENST00000614461 KRTAP4-7Q9BYR0 210 aa9.37□□□□□ -0.91
RCC1L-202ENST00000614461 INE1O15225 51 aa9.32□□□□□ -0.92
RCC1L-202ENST00000614461 MT1EP04732 61 aa9.29□□□□□ -0.92
RCC1L-202ENST00000614461 KRTAP9-6A8MVA2 160 aa9.27□□□□□ -0.93
RCC1L-202ENST00000614461 MT1LQ93083 61 aa9.23□□□□□ -0.93
RCC1L-202ENST00000614461 FCGBPQ9Y6R7 5405 aaPredicted RBP9.21□□□□□ -0.94
RCC1L-202ENST00000614461 MUC12Q9UKN1 5478 aa9.08□□□□□ -0.96
RCC1L-202ENST00000614461 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
RCC1L-202ENST00000614461 KRTAP4-3Q9BYR4 195 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms