RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
ATF3-211ENST00000613954 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
ATF3-211ENST00000613954 A0A0A0MQY5 61 aa6.03□□□□□ -1.44
ATF3-211ENST00000613954 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
ATF3-211ENST00000613954 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
ATF3-211ENST00000613954 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
ATF3-211ENST00000613954 EPPK1P58107 5090 aaKnown RBP6□□□□□ -1.45
ATF3-211ENST00000613954 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
ATF3-211ENST00000613954 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
ATF3-211ENST00000613954 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
ATF3-211ENST00000613954 K7ERS5 55 aa5.98□□□□□ -1.45
ATF3-211ENST00000613954 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
ATF3-211ENST00000613954 TNXBP22105 4242 aa5.95□□□□□ -1.46
ATF3-211ENST00000613954 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
ATF3-211ENST00000613954 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
ATF3-211ENST00000613954 COX6B2Q6YFQ2 88 aa5.94□□□□□ -1.46
ATF3-211ENST00000613954 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
ATF3-211ENST00000613954 FAT3Q8TDW7 4589 aa5.93□□□□□ -1.46
ATF3-211ENST00000613954 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
ATF3-211ENST00000613954 MYCBP2O75592 4640 aa5.82□□□□□ -1.48
ATF3-211ENST00000613954 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
ATF3-211ENST00000613954 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
ATF3-211ENST00000613954 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
ATF3-211ENST00000613954 P0C880 135 aa5.78□□□□□ -1.48
ATF3-211ENST00000613954 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
ATF3-211ENST00000613954 XP32Q5T750 250 aa5.75□□□□□ -1.49
ATF3-211ENST00000613954 HERC2O95714 4834 aa5.73□□□□□ -1.49
ATF3-211ENST00000613954 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
ATF3-211ENST00000613954 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
ATF3-211ENST00000613954 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
ATF3-211ENST00000613954 S4R3F8 94 aa5.72□□□□□ -1.49
ATF3-211ENST00000613954 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
ATF3-211ENST00000613954 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
ATF3-211ENST00000613954 A0A0D9SG42 100 aa5.67□□□□□ -1.5
ATF3-211ENST00000613954 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
ATF3-211ENST00000613954 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
ATF3-211ENST00000613954 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
ATF3-211ENST00000613954 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
ATF3-211ENST00000613954 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
ATF3-211ENST00000613954 M0QZ58 72 aa5.53□□□□□ -1.52
ATF3-211ENST00000613954 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
ATF3-211ENST00000613954 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
ATF3-211ENST00000613954 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
ATF3-211ENST00000613954 LPAP08519 4548 aa5.51□□□□□ -1.53
ATF3-211ENST00000613954 LRP2P98164 4655 aa5.49□□□□□ -1.53
ATF3-211ENST00000613954 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
ATF3-211ENST00000613954 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
ATF3-211ENST00000613954 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
ATF3-211ENST00000613954 HERC1Q15751 4861 aa5.34□□□□□ -1.55
ATF3-211ENST00000613954 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.56
ATF3-211ENST00000613954 R4GN34 69 aa5.31□□□□□ -1.56
ATF3-211ENST00000613954 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
ATF3-211ENST00000613954 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.57
ATF3-211ENST00000613954 KRTAP4-6Q9BYQ5 205 aa5.21□□□□□ -1.57
ATF3-211ENST00000613954 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
ATF3-211ENST00000613954 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
ATF3-211ENST00000613954 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
ATF3-211ENST00000613954 MUC2Q02817 5179 aa5.12□□□□□ -1.59
ATF3-211ENST00000613954 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
ATF3-211ENST00000613954 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.6
ATF3-211ENST00000613954 RNF213Q63HN8 5207 aa5.09□□□□□ -1.6
ATF3-211ENST00000613954 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
ATF3-211ENST00000613954 MT1HP80294 61 aa4.99□□□□□ -1.61
ATF3-211ENST00000613954 M0R2T5 61 aa4.96□□□□□ -1.62
ATF3-211ENST00000613954 TNP1P09430 55 aa4.92□□□□□ -1.62
ATF3-211ENST00000613954 FAT4Q6V0I7 4981 aa4.89□□□□□ -1.63
ATF3-211ENST00000613954 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
ATF3-211ENST00000613954 MT2AP02795 61 aa4.82□□□□□ -1.64
ATF3-211ENST00000613954 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
ATF3-211ENST00000613954 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
ATF3-211ENST00000613954 MT1FP04733 61 aa4.79□□□□□ -1.64
ATF3-211ENST00000613954 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
ATF3-211ENST00000613954 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
ATF3-211ENST00000613954 INE1O15225 51 aa4.73□□□□□ -1.65
ATF3-211ENST00000613954 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
ATF3-211ENST00000613954 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
ATF3-211ENST00000613954 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
ATF3-211ENST00000613954 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
ATF3-211ENST00000613954 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
ATF3-211ENST00000613954 MT1BP07438 61 aa4.56□□□□□ -1.68
ATF3-211ENST00000613954 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
ATF3-211ENST00000613954 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
ATF3-211ENST00000613954 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
ATF3-211ENST00000613954 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
ATF3-211ENST00000613954 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
ATF3-211ENST00000613954 MT1XP80297 61 aa4.43□□□□□ -1.7
ATF3-211ENST00000613954 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
ATF3-211ENST00000613954 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
ATF3-211ENST00000613954 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
ATF3-211ENST00000613954 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
ATF3-211ENST00000613954 USH2AO75445 5202 aa4.33□□□□□ -1.72
ATF3-211ENST00000613954 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
ATF3-211ENST00000613954 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
ATF3-211ENST00000613954 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
ATF3-211ENST00000613954 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
ATF3-211ENST00000613954 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
ATF3-211ENST00000613954 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
ATF3-211ENST00000613954 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
ATF3-211ENST00000613954 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
ATF3-211ENST00000613954 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 246.4 ms