RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 IGHV6-1A0A0B4J1U7 121 aa7.06□□□□□ -1.28
CCL4-201ENST00000613947 C9orf92A6NGG3 77 aa7.04□□□□□ -1.28
CCL4-201ENST00000613947 LINC00313P59037 77 aa7.02□□□□□ -1.29
CCL4-201ENST00000613947 XP32Q5T750 250 aa7.02□□□□□ -1.29
CCL4-201ENST00000613947 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
CCL4-201ENST00000613947 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
CCL4-201ENST00000613947 C8orf87E5RJ46 101 aa7□□□□□ -1.29
CCL4-201ENST00000613947 Q5W150 140 aa6.96□□□□□ -1.3
CCL4-201ENST00000613947 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
CCL4-201ENST00000613947 A0A1B0GU69 56 aa6.95□□□□□ -1.3
CCL4-201ENST00000613947 KRTAP3-3Q9BYR6 98 aa6.95□□□□□ -1.3
CCL4-201ENST00000613947 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
CCL4-201ENST00000613947 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
CCL4-201ENST00000613947 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
CCL4-201ENST00000613947 UQCR11O14957 56 aa6.91□□□□□ -1.3
CCL4-201ENST00000613947 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
CCL4-201ENST00000613947 IGKV2-30P06310 120 aa6.88□□□□□ -1.31
CCL4-201ENST00000613947 RPL37P61927 97 aaKnown RBP6.88□□□□□ -1.31
CCL4-201ENST00000613947 PRAC1Q96KF2 57 aa6.88□□□□□ -1.31
CCL4-201ENST00000613947 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
CCL4-201ENST00000613947 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
CCL4-201ENST00000613947 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
CCL4-201ENST00000613947 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
CCL4-201ENST00000613947 A8MUU9 505 aa6.81□□□□□ -1.32
CCL4-201ENST00000613947 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
CCL4-201ENST00000613947 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
CCL4-201ENST00000613947 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
CCL4-201ENST00000613947 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
CCL4-201ENST00000613947 H3BS24 57 aa6.63□□□□□ -1.35
CCL4-201ENST00000613947 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
CCL4-201ENST00000613947 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
CCL4-201ENST00000613947 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
CCL4-201ENST00000613947 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
CCL4-201ENST00000613947 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
CCL4-201ENST00000613947 H0YAA0 97 aa6.53□□□□□ -1.36
CCL4-201ENST00000613947 MT1HP80294 61 aa6.52□□□□□ -1.37
CCL4-201ENST00000613947 A0A1B0GU33 70 aa6.49□□□□□ -1.37
CCL4-201ENST00000613947 ROMO1P60602 79 aa6.48□□□□□ -1.37
CCL4-201ENST00000613947 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
CCL4-201ENST00000613947 K7ERS5 55 aa6.43□□□□□ -1.38
CCL4-201ENST00000613947 M0R2T5 61 aa6.42□□□□□ -1.38
CCL4-201ENST00000613947 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
CCL4-201ENST00000613947 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
CCL4-201ENST00000613947 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
CCL4-201ENST00000613947 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
CCL4-201ENST00000613947 P0C880 135 aa6.23□□□□□ -1.41
CCL4-201ENST00000613947 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
CCL4-201ENST00000613947 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
CCL4-201ENST00000613947 MT2AP02795 61 aa6.15□□□□□ -1.43
CCL4-201ENST00000613947 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
CCL4-201ENST00000613947 MT1FP04733 61 aa6.11□□□□□ -1.43
CCL4-201ENST00000613947 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
CCL4-201ENST00000613947 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
CCL4-201ENST00000613947 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
CCL4-201ENST00000613947 S4R3F8 94 aa6.1□□□□□ -1.43
CCL4-201ENST00000613947 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
CCL4-201ENST00000613947 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
CCL4-201ENST00000613947 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
CCL4-201ENST00000613947 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
CCL4-201ENST00000613947 USH2AO75445 5202 aa6.01□□□□□ -1.45
CCL4-201ENST00000613947 A0A0D9SG42 100 aa5.98□□□□□ -1.45
CCL4-201ENST00000613947 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
CCL4-201ENST00000613947 NDUFAF8A1L188 74 aa5.93□□□□□ -1.46
CCL4-201ENST00000613947 LCE2BO14633 110 aa5.93□□□□□ -1.46
CCL4-201ENST00000613947 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
CCL4-201ENST00000613947 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
CCL4-201ENST00000613947 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
CCL4-201ENST00000613947 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
CCL4-201ENST00000613947 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
CCL4-201ENST00000613947 M0QZ58 72 aa5.89□□□□□ -1.47
CCL4-201ENST00000613947 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
CCL4-201ENST00000613947 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
CCL4-201ENST00000613947 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
CCL4-201ENST00000613947 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
CCL4-201ENST00000613947 MT1BP07438 61 aa5.66□□□□□ -1.5
CCL4-201ENST00000613947 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
CCL4-201ENST00000613947 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
CCL4-201ENST00000613947 R4GN34 69 aa5.61□□□□□ -1.51
CCL4-201ENST00000613947 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
CCL4-201ENST00000613947 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
CCL4-201ENST00000613947 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
CCL4-201ENST00000613947 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
CCL4-201ENST00000613947 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
CCL4-201ENST00000613947 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
CCL4-201ENST00000613947 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
CCL4-201ENST00000613947 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
CCL4-201ENST00000613947 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
CCL4-201ENST00000613947 MT1XP80297 61 aa5.37□□□□□ -1.55
CCL4-201ENST00000613947 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
CCL4-201ENST00000613947 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
CCL4-201ENST00000613947 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
CCL4-201ENST00000613947 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
CCL4-201ENST00000613947 KMT2DO14686 5537 aa5.28□□□□□ -1.56
CCL4-201ENST00000613947 TNP1P09430 55 aa5.21□□□□□ -1.57
CCL4-201ENST00000613947 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.57
CCL4-201ENST00000613947 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
CCL4-201ENST00000613947 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
CCL4-201ENST00000613947 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
CCL4-201ENST00000613947 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
CCL4-201ENST00000613947 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms