RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
SMARCD2-212ENST00000613943 RPL37P61927 97 aaKnown RBP10.3□□□□□ -0.76
SMARCD2-212ENST00000613943 KTN1-AS1Q86SY8 53 aa10.27□□□□□ -0.77
SMARCD2-212ENST00000613943 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.77
SMARCD2-212ENST00000613943 LRP2P98164 4655 aa10.21□□□□□ -0.78
SMARCD2-212ENST00000613943 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
SMARCD2-212ENST00000613943 H0YAA0 97 aa10.15□□□□□ -0.78
SMARCD2-212ENST00000613943 A0A1B0GU33 70 aa10.1□□□□□ -0.79
SMARCD2-212ENST00000613943 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
SMARCD2-212ENST00000613943 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
SMARCD2-212ENST00000613943 H1FX-AS1Q4G0G2 97 aa10.06□□□□□ -0.8
SMARCD2-212ENST00000613943 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
SMARCD2-212ENST00000613943 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
SMARCD2-212ENST00000613943 S4R3F8 94 aa9.98□□□□□ -0.81
SMARCD2-212ENST00000613943 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
SMARCD2-212ENST00000613943 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
SMARCD2-212ENST00000613943 H3BS24 57 aa9.92□□□□□ -0.82
SMARCD2-212ENST00000613943 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
SMARCD2-212ENST00000613943 KRTAP13-4Q3LI77 160 aa9.85□□□□□ -0.83
SMARCD2-212ENST00000613943 HERC2O95714 4834 aa9.84□□□□□ -0.83
SMARCD2-212ENST00000613943 P0C880 135 aa9.82□□□□□ -0.84
SMARCD2-212ENST00000613943 A0A0D9SG42 100 aa9.78□□□□□ -0.84
SMARCD2-212ENST00000613943 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
SMARCD2-212ENST00000613943 J3QL48 77 aa9.71□□□□□ -0.85
SMARCD2-212ENST00000613943 MUC17Q685J3 4493 aa9.66□□□□□ -0.86
SMARCD2-212ENST00000613943 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
SMARCD2-212ENST00000613943 K7ERS5 55 aa9.62□□□□□ -0.87
SMARCD2-212ENST00000613943 MUC2Q02817 5179 aa9.61□□□□□ -0.87
SMARCD2-212ENST00000613943 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
SMARCD2-212ENST00000613943 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
SMARCD2-212ENST00000613943 SEC61BP60468 96 aaKnown RBP9.57□□□□□ -0.88
SMARCD2-212ENST00000613943 KRTAP12-2P59991 146 aa9.5□□□□□ -0.89
SMARCD2-212ENST00000613943 LINC01554Q52M75 96 aa9.49□□□□□ -0.89
SMARCD2-212ENST00000613943 HERC1Q15751 4861 aa9.47□□□□□ -0.89
SMARCD2-212ENST00000613943 PCLOQ9Y6V0 5065 aa9.43□□□□□ -0.9
SMARCD2-212ENST00000613943 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
SMARCD2-212ENST00000613943 KRTAP25-1Q3LHN0 102 aa9.43□□□□□ -0.9
SMARCD2-212ENST00000613943 ROMO1P60602 79 aa9.42□□□□□ -0.9
SMARCD2-212ENST00000613943 KRTAP12-1P59990 96 aa9.39□□□□□ -0.91
SMARCD2-212ENST00000613943 KRTAP19-2Q3LHN2 52 aa9.35□□□□□ -0.91
SMARCD2-212ENST00000613943 M0QZ58 72 aa9.33□□□□□ -0.92
SMARCD2-212ENST00000613943 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
SMARCD2-212ENST00000613943 R4GN34 69 aa9.28□□□□□ -0.92
SMARCD2-212ENST00000613943 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
SMARCD2-212ENST00000613943 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
SMARCD2-212ENST00000613943 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
SMARCD2-212ENST00000613943 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.94
SMARCD2-212ENST00000613943 RNF213Q63HN8 5207 aa9□□□□□ -0.97
SMARCD2-212ENST00000613943 UBR4Q5T4S7 5183 aa9□□□□□ -0.97
SMARCD2-212ENST00000613943 A0A0A0MQY5 61 aa8.97□□□□□ -0.97
SMARCD2-212ENST00000613943 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
SMARCD2-212ENST00000613943 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
SMARCD2-212ENST00000613943 M0R2T5 61 aa8.72□□□□□ -1.01
SMARCD2-212ENST00000613943 MT1HP80294 61 aa8.68□□□□□ -1.02
SMARCD2-212ENST00000613943 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
SMARCD2-212ENST00000613943 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
SMARCD2-212ENST00000613943 MT1FP04733 61 aa8.51□□□□□ -1.05
SMARCD2-212ENST00000613943 SPRR2GQ9BYE4 73 aa8.5□□□□□ -1.05
SMARCD2-212ENST00000613943 MT2AP02795 61 aa8.48□□□□□ -1.05
SMARCD2-212ENST00000613943 KRTAP10-10P60014 251 aa8.47□□□□□ -1.05
SMARCD2-212ENST00000613943 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
SMARCD2-212ENST00000613943 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
SMARCD2-212ENST00000613943 TNP1P09430 55 aa8.36□□□□□ -1.07
SMARCD2-212ENST00000613943 PP632Q6XCG6 107 aa8.31□□□□□ -1.08
SMARCD2-212ENST00000613943 NDUFAF8A1L188 74 aa8.3□□□□□ -1.08
SMARCD2-212ENST00000613943 KRTAP19-8Q3LI54 63 aa8.14□□□□□ -1.11
SMARCD2-212ENST00000613943 MT1BP07438 61 aa8.14□□□□□ -1.11
SMARCD2-212ENST00000613943 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
SMARCD2-212ENST00000613943 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
SMARCD2-212ENST00000613943 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
SMARCD2-212ENST00000613943 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
SMARCD2-212ENST00000613943 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
SMARCD2-212ENST00000613943 MT1XP80297 61 aa8.03□□□□□ -1.12
SMARCD2-212ENST00000613943 USH2AO75445 5202 aa7.98□□□□□ -1.13
SMARCD2-212ENST00000613943 LCE2BO14633 110 aa7.85□□□□□ -1.15
SMARCD2-212ENST00000613943 KRTAP10-7P60409 375 aaPredicted RBP7.85□□□□□ -1.15
SMARCD2-212ENST00000613943 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
SMARCD2-212ENST00000613943 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
SMARCD2-212ENST00000613943 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
SMARCD2-212ENST00000613943 SPRR5A0A1B0GTR4 108 aa7.72□□□□□ -1.17
SMARCD2-212ENST00000613943 KMT2DO14686 5537 aa7.71□□□□□ -1.17
SMARCD2-212ENST00000613943 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
SMARCD2-212ENST00000613943 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
SMARCD2-212ENST00000613943 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
SMARCD2-212ENST00000613943 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
SMARCD2-212ENST00000613943 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
SMARCD2-212ENST00000613943 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
SMARCD2-212ENST00000613943 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
SMARCD2-212ENST00000613943 KRTAP19-7Q3SYF9 63 aa7.16□□□□□ -1.26
SMARCD2-212ENST00000613943 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
SMARCD2-212ENST00000613943 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
SMARCD2-212ENST00000613943 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
SMARCD2-212ENST00000613943 KRTAP9-6A8MVA2 160 aa6.98□□□□□ -1.29
SMARCD2-212ENST00000613943 MT1EP04732 61 aa6.95□□□□□ -1.3
SMARCD2-212ENST00000613943 MT1LQ93083 61 aa6.91□□□□□ -1.3
SMARCD2-212ENST00000613943 FCGBPQ9Y6R7 5405 aaPredicted RBP6.91□□□□□ -1.3
SMARCD2-212ENST00000613943 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
SMARCD2-212ENST00000613943 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.33
SMARCD2-212ENST00000613943 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
SMARCD2-212ENST00000613943 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms