RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
CCDC47-207ENST00000612558 PCOTHQ58A44 107 aa4.8□□□□□ -1.64
CCDC47-207ENST00000612558 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
CCDC47-207ENST00000612558 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
CCDC47-207ENST00000612558 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
CCDC47-207ENST00000612558 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
CCDC47-207ENST00000612558 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
CCDC47-207ENST00000612558 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
CCDC47-207ENST00000612558 C7orf65Q6ZTY9 151 aa4.75□□□□□ -1.65
CCDC47-207ENST00000612558 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
CCDC47-207ENST00000612558 PCLOQ9Y6V0 5065 aa4.74□□□□□ -1.65
CCDC47-207ENST00000612558 HRES1P13985 223 aa4.74□□□□□ -1.65
CCDC47-207ENST00000612558 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
CCDC47-207ENST00000612558 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
CCDC47-207ENST00000612558 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
CCDC47-207ENST00000612558 SPINK7P58062 85 aa4.71□□□□□ -1.66
CCDC47-207ENST00000612558 LPAP08519 4548 aa4.69□□□□□ -1.66
CCDC47-207ENST00000612558 LRP2P98164 4655 aa4.68□□□□□ -1.66
CCDC47-207ENST00000612558 DMAC1Q96GE9 116 aa4.66□□□□□ -1.66
CCDC47-207ENST00000612558 ACYP2P14621 99 aa4.65□□□□□ -1.66
CCDC47-207ENST00000612558 C4orf26Q17RF5 130 aa4.64□□□□□ -1.67
CCDC47-207ENST00000612558 COA5Q86WW8 74 aa4.63□□□□□ -1.67
CCDC47-207ENST00000612558 A8MUN3 132 aa4.62□□□□□ -1.67
CCDC47-207ENST00000612558 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
CCDC47-207ENST00000612558 HERC1Q15751 4861 aa4.62□□□□□ -1.67
CCDC47-207ENST00000612558 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
CCDC47-207ENST00000612558 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
CCDC47-207ENST00000612558 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
CCDC47-207ENST00000612558 COX6B2Q6YFQ2 88 aa4.59□□□□□ -1.67
CCDC47-207ENST00000612558 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
CCDC47-207ENST00000612558 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
CCDC47-207ENST00000612558 CHKB-CPT1BH3BT56 60 aa4.57□□□□□ -1.68
CCDC47-207ENST00000612558 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
CCDC47-207ENST00000612558 Q1T7F1 81 aa4.53□□□□□ -1.69
CCDC47-207ENST00000612558 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
CCDC47-207ENST00000612558 V9GYY9 64 aa4.52□□□□□ -1.69
CCDC47-207ENST00000612558 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
CCDC47-207ENST00000612558 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
CCDC47-207ENST00000612558 H1FX-AS1Q4G0G2 97 aa4.48□□□□□ -1.69
CCDC47-207ENST00000612558 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
CCDC47-207ENST00000612558 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
CCDC47-207ENST00000612558 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CCDC47-207ENST00000612558 S4R3F8 94 aa4.44□□□□□ -1.7
CCDC47-207ENST00000612558 SEC61GP60059 68 aa4.44□□□□□ -1.7
CCDC47-207ENST00000612558 PSPHP1O15172 72 aa4.43□□□□□ -1.7
CCDC47-207ENST00000612558 LCA10Q71F78 164 aa4.43□□□□□ -1.7
CCDC47-207ENST00000612558 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
CCDC47-207ENST00000612558 MUC2Q02817 5179 aa4.42□□□□□ -1.7
CCDC47-207ENST00000612558 A0A1B0GU69 56 aa4.4□□□□□ -1.71
CCDC47-207ENST00000612558 Q5VV11 94 aa4.39□□□□□ -1.71
CCDC47-207ENST00000612558 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
CCDC47-207ENST00000612558 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
CCDC47-207ENST00000612558 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
CCDC47-207ENST00000612558 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
CCDC47-207ENST00000612558 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
CCDC47-207ENST00000612558 A6NED7 52 aa4.3□□□□□ -1.72
CCDC47-207ENST00000612558 UQCR11O14957 56 aa4.27□□□□□ -1.73
CCDC47-207ENST00000612558 A0A1B0GU33 70 aa4.26□□□□□ -1.73
CCDC47-207ENST00000612558 H0YAA0 97 aa4.26□□□□□ -1.73
CCDC47-207ENST00000612558 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
CCDC47-207ENST00000612558 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
CCDC47-207ENST00000612558 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
CCDC47-207ENST00000612558 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
CCDC47-207ENST00000612558 P0C880 135 aa4.22□□□□□ -1.73
CCDC47-207ENST00000612558 MIR22HGQ0VDD5 57 aa4.22□□□□□ -1.73
CCDC47-207ENST00000612558 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
CCDC47-207ENST00000612558 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
CCDC47-207ENST00000612558 A8MU10 97 aa4.19□□□□□ -1.74
CCDC47-207ENST00000612558 MT3P25713 68 aa4.19□□□□□ -1.74
CCDC47-207ENST00000612558 MT1HP80294 61 aa4.19□□□□□ -1.74
CCDC47-207ENST00000612558 M0R2T5 61 aa4.16□□□□□ -1.74
CCDC47-207ENST00000612558 M0QZ58 72 aa4.14□□□□□ -1.75
CCDC47-207ENST00000612558 KRTAP13-4Q3LI77 160 aa4.14□□□□□ -1.75
CCDC47-207ENST00000612558 R4GN34 69 aa4.1□□□□□ -1.75
CCDC47-207ENST00000612558 A0A0D9SG42 100 aa4.07□□□□□ -1.76
CCDC47-207ENST00000612558 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
CCDC47-207ENST00000612558 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CCDC47-207ENST00000612558 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
CCDC47-207ENST00000612558 K7ERS5 55 aa4.04□□□□□ -1.76
CCDC47-207ENST00000612558 MT2AP02795 61 aa4.02□□□□□ -1.77
CCDC47-207ENST00000612558 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
CCDC47-207ENST00000612558 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
CCDC47-207ENST00000612558 A6NN06 94 aa4□□□□□ -1.77
CCDC47-207ENST00000612558 MT1FP04733 61 aa3.99□□□□□ -1.77
CCDC47-207ENST00000612558 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
CCDC47-207ENST00000612558 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
CCDC47-207ENST00000612558 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
CCDC47-207ENST00000612558 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
CCDC47-207ENST00000612558 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
CCDC47-207ENST00000612558 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
CCDC47-207ENST00000612558 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
CCDC47-207ENST00000612558 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
CCDC47-207ENST00000612558 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CCDC47-207ENST00000612558 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
CCDC47-207ENST00000612558 ROMO1P60602 79 aa3.86□□□□□ -1.79
CCDC47-207ENST00000612558 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
CCDC47-207ENST00000612558 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
CCDC47-207ENST00000612558 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
CCDC47-207ENST00000612558 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
CCDC47-207ENST00000612558 MT1BP07438 61 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms