RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KRTAP9-7A8MTY7 169 aa8.3□□□□□ -1.08
SEMA3B-211ENST00000612509 K7ERU9 68 aa8.28□□□□□ -1.08
SEMA3B-211ENST00000612509 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
SEMA3B-211ENST00000612509 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.09
SEMA3B-211ENST00000612509 A8MUN3 132 aa8.26□□□□□ -1.09
SEMA3B-211ENST00000612509 H3BPC8 53 aa8.25□□□□□ -1.09
SEMA3B-211ENST00000612509 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
SEMA3B-211ENST00000612509 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
SEMA3B-211ENST00000612509 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
SEMA3B-211ENST00000612509 NDUFC1O43677 76 aa8.19□□□□□ -1.1
SEMA3B-211ENST00000612509 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
SEMA3B-211ENST00000612509 H0YAA0 97 aa8.1□□□□□ -1.11
SEMA3B-211ENST00000612509 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
SEMA3B-211ENST00000612509 SMIM20Q8N5G0 67 aa8.09□□□□□ -1.11
SEMA3B-211ENST00000612509 TRAV7A0A075B6U4 112 aa8.08□□□□□ -1.12
SEMA3B-211ENST00000612509 MT1BP07438 61 aa8.07□□□□□ -1.12
SEMA3B-211ENST00000612509 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
SEMA3B-211ENST00000612509 Q5VV11 94 aa8.07□□□□□ -1.12
SEMA3B-211ENST00000612509 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
SEMA3B-211ENST00000612509 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
SEMA3B-211ENST00000612509 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
SEMA3B-211ENST00000612509 SYNE2Q8WXH0 6885 aaKnown RBP7.97□□□□□ -1.13
SEMA3B-211ENST00000612509 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
SEMA3B-211ENST00000612509 A6NN06 94 aa7.9□□□□□ -1.14
SEMA3B-211ENST00000612509 ACYP2P14621 99 aa7.89□□□□□ -1.15
SEMA3B-211ENST00000612509 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
SEMA3B-211ENST00000612509 P0C880 135 aa7.85□□□□□ -1.15
SEMA3B-211ENST00000612509 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
SEMA3B-211ENST00000612509 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
SEMA3B-211ENST00000612509 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
SEMA3B-211ENST00000612509 R4GN34 69 aa7.8□□□□□ -1.16
SEMA3B-211ENST00000612509 SPANXA2-OT1Q8N9U9 137 aa7.79□□□□□ -1.16
SEMA3B-211ENST00000612509 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
SEMA3B-211ENST00000612509 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
SEMA3B-211ENST00000612509 M0QZ58 72 aa7.75□□□□□ -1.17
SEMA3B-211ENST00000612509 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
SEMA3B-211ENST00000612509 COX7CP15954 63 aa7.67□□□□□ -1.18
SEMA3B-211ENST00000612509 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
SEMA3B-211ENST00000612509 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
SEMA3B-211ENST00000612509 MT1XP80297 61 aa7.61□□□□□ -1.19
SEMA3B-211ENST00000612509 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
SEMA3B-211ENST00000612509 COA5Q86WW8 74 aa7.57□□□□□ -1.2
SEMA3B-211ENST00000612509 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
SEMA3B-211ENST00000612509 H7BZZ5 65 aa7.53□□□□□ -1.2
SEMA3B-211ENST00000612509 NEBP20929 6669 aa7.49□□□□□ -1.21
SEMA3B-211ENST00000612509 ANAPC13Q9BS18 74 aa7.48□□□□□ -1.21
SEMA3B-211ENST00000612509 MUC12Q9UKN1 5478 aa7.46□□□□□ -1.21
SEMA3B-211ENST00000612509 KRTAP5-9P26371 169 aa7.43□□□□□ -1.22
SEMA3B-211ENST00000612509 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
SEMA3B-211ENST00000612509 KMT2DO14686 5537 aa7.41□□□□□ -1.22
SEMA3B-211ENST00000612509 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
SEMA3B-211ENST00000612509 SEC61GP60059 68 aa7.35□□□□□ -1.23
SEMA3B-211ENST00000612509 SERP1Q9Y6X1 66 aa7.34□□□□□ -1.23
SEMA3B-211ENST00000612509 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
SEMA3B-211ENST00000612509 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.25
SEMA3B-211ENST00000612509 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
SEMA3B-211ENST00000612509 MDN1Q9NU22 5596 aa7.25□□□□□ -1.25
SEMA3B-211ENST00000612509 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
SEMA3B-211ENST00000612509 KRTAP20-1Q3LI63 56 aa7.24□□□□□ -1.25
SEMA3B-211ENST00000612509 A0A1B0GU33 70 aa7.22□□□□□ -1.25
SEMA3B-211ENST00000612509 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
SEMA3B-211ENST00000612509 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
SEMA3B-211ENST00000612509 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
SEMA3B-211ENST00000612509 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
SEMA3B-211ENST00000612509 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
SEMA3B-211ENST00000612509 A0A0D9SG42 100 aa7.19□□□□□ -1.26
SEMA3B-211ENST00000612509 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
SEMA3B-211ENST00000612509 A0A1B0GU69 56 aa7.17□□□□□ -1.26
SEMA3B-211ENST00000612509 SPRR2EP22531 72 aa7.1□□□□□ -1.27
SEMA3B-211ENST00000612509 SPRR2BP35325 72 aa7.1□□□□□ -1.27
SEMA3B-211ENST00000612509 SPRR2AP35326 72 aa7.1□□□□□ -1.27
SEMA3B-211ENST00000612509 TMEM258P61165 79 aa7.08□□□□□ -1.28
SEMA3B-211ENST00000612509 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
SEMA3B-211ENST00000612509 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
SEMA3B-211ENST00000612509 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
SEMA3B-211ENST00000612509 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
SEMA3B-211ENST00000612509 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
SEMA3B-211ENST00000612509 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
SEMA3B-211ENST00000612509 PRR15LQ9BU68 103 aa7□□□□□ -1.29
SEMA3B-211ENST00000612509 A8MU10 97 aa6.98□□□□□ -1.29
SEMA3B-211ENST00000612509 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
SEMA3B-211ENST00000612509 SPRR2DP22532 72 aa6.86□□□□□ -1.31
SEMA3B-211ENST00000612509 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
SEMA3B-211ENST00000612509 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
SEMA3B-211ENST00000612509 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
SEMA3B-211ENST00000612509 UQCR11O14957 56 aa6.76□□□□□ -1.33
SEMA3B-211ENST00000612509 MT1EP04732 61 aa6.74□□□□□ -1.33
SEMA3B-211ENST00000612509 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
SEMA3B-211ENST00000612509 TNP1P09430 55 aa6.67□□□□□ -1.34
SEMA3B-211ENST00000612509 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
SEMA3B-211ENST00000612509 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
SEMA3B-211ENST00000612509 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
SEMA3B-211ENST00000612509 V9GYY9 64 aa6.64□□□□□ -1.35
SEMA3B-211ENST00000612509 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
SEMA3B-211ENST00000612509 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
SEMA3B-211ENST00000612509 PSPHP1O15172 72 aa6.6□□□□□ -1.35
SEMA3B-211ENST00000612509 Q1T7F1 81 aa6.6□□□□□ -1.35
SEMA3B-211ENST00000612509 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
SEMA3B-211ENST00000612509 K7ERS5 55 aa6.47□□□□□ -1.37
SEMA3B-211ENST00000612509 MT1GP13640 62 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms