RNA–Protein interactions for RNA: ENST00000611589.4

NRXN1-220, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-220ENST00000611589 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.95
NRXN1-220ENST00000611589 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
NRXN1-220ENST00000611589 HERC2O95714 4834 aa9.12□□□□□ -0.95
NRXN1-220ENST00000611589 ABCA13Q86UQ4 5058 aa9.11□□□□□ -0.95
NRXN1-220ENST00000611589 MIR22HGQ0VDD5 57 aa9.11□□□□□ -0.95
NRXN1-220ENST00000611589 S4R3F8 94 aa9.08□□□□□ -0.96
NRXN1-220ENST00000611589 LRP2P98164 4655 aa9.07□□□□□ -0.96
NRXN1-220ENST00000611589 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
NRXN1-220ENST00000611589 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
NRXN1-220ENST00000611589 SEC61BP60468 96 aaKnown RBP9.06□□□□□ -0.96
NRXN1-220ENST00000611589 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
NRXN1-220ENST00000611589 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
NRXN1-220ENST00000611589 LPAP08519 4548 aa9.01□□□□□ -0.97
NRXN1-220ENST00000611589 A0A1B0GU33 70 aa8.99□□□□□ -0.97
NRXN1-220ENST00000611589 A6NN06 94 aa8.99□□□□□ -0.97
NRXN1-220ENST00000611589 H0YAA0 97 aa8.91□□□□□ -0.98
NRXN1-220ENST00000611589 KRTAP10-6P60371 365 aaPredicted RBP8.87□□□□□ -0.99
NRXN1-220ENST00000611589 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
NRXN1-220ENST00000611589 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
NRXN1-220ENST00000611589 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
NRXN1-220ENST00000611589 KTN1-AS1Q86SY8 53 aa8.83□□□□□ -1
NRXN1-220ENST00000611589 KRTAP4-1Q9BYQ7 146 aa8.79□□□□□ -1
NRXN1-220ENST00000611589 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
NRXN1-220ENST00000611589 P0C880 135 aa8.71□□□□□ -1.01
NRXN1-220ENST00000611589 KRTAP19-2Q3LHN2 52 aa8.66□□□□□ -1.02
NRXN1-220ENST00000611589 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
NRXN1-220ENST00000611589 K7ERS5 55 aa8.65□□□□□ -1.02
NRXN1-220ENST00000611589 PCLOQ9Y6V0 5065 aa8.63□□□□□ -1.03
NRXN1-220ENST00000611589 M0QZ58 72 aa8.57□□□□□ -1.04
NRXN1-220ENST00000611589 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
NRXN1-220ENST00000611589 HERC1Q15751 4861 aa8.56□□□□□ -1.04
NRXN1-220ENST00000611589 A0A0D9SG42 100 aa8.51□□□□□ -1.05
NRXN1-220ENST00000611589 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
NRXN1-220ENST00000611589 FLGP20930 4061 aaPredicted RBP8.38□□□□□ -1.07
NRXN1-220ENST00000611589 R4GN34 69 aa8.38□□□□□ -1.07
NRXN1-220ENST00000611589 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
NRXN1-220ENST00000611589 KRTAP12-2P59991 146 aa8.35□□□□□ -1.07
NRXN1-220ENST00000611589 ROMO1P60602 79 aa8.34□□□□□ -1.07
NRXN1-220ENST00000611589 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
NRXN1-220ENST00000611589 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
NRXN1-220ENST00000611589 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
NRXN1-220ENST00000611589 MUC2Q02817 5179 aa8.26□□□□□ -1.09
NRXN1-220ENST00000611589 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
NRXN1-220ENST00000611589 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
NRXN1-220ENST00000611589 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
NRXN1-220ENST00000611589 RNF213Q63HN8 5207 aa8.09□□□□□ -1.11
NRXN1-220ENST00000611589 MT1HP80294 61 aa8.09□□□□□ -1.11
NRXN1-220ENST00000611589 M0R2T5 61 aa8.03□□□□□ -1.12
NRXN1-220ENST00000611589 UBR4Q5T4S7 5183 aa8.01□□□□□ -1.13
NRXN1-220ENST00000611589 FAT4Q6V0I7 4981 aa7.96□□□□□ -1.13
NRXN1-220ENST00000611589 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
NRXN1-220ENST00000611589 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
NRXN1-220ENST00000611589 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
NRXN1-220ENST00000611589 MT2AP02795 61 aa7.87□□□□□ -1.15
NRXN1-220ENST00000611589 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
NRXN1-220ENST00000611589 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
NRXN1-220ENST00000611589 MT1FP04733 61 aa7.83□□□□□ -1.16
NRXN1-220ENST00000611589 KRTAP10-10P60014 251 aa7.81□□□□□ -1.16
NRXN1-220ENST00000611589 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
NRXN1-220ENST00000611589 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
NRXN1-220ENST00000611589 PP632Q6XCG6 107 aa7.63□□□□□ -1.19
NRXN1-220ENST00000611589 TNP1P09430 55 aa7.6□□□□□ -1.19
NRXN1-220ENST00000611589 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
NRXN1-220ENST00000611589 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
NRXN1-220ENST00000611589 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
NRXN1-220ENST00000611589 MT1BP07438 61 aa7.51□□□□□ -1.21
NRXN1-220ENST00000611589 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
NRXN1-220ENST00000611589 MT1XP80297 61 aa7.34□□□□□ -1.23
NRXN1-220ENST00000611589 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
NRXN1-220ENST00000611589 H3BS24 57 aa7.29□□□□□ -1.24
NRXN1-220ENST00000611589 LCE2BO14633 110 aa7.26□□□□□ -1.25
NRXN1-220ENST00000611589 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
NRXN1-220ENST00000611589 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
NRXN1-220ENST00000611589 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
NRXN1-220ENST00000611589 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
NRXN1-220ENST00000611589 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
NRXN1-220ENST00000611589 NDUFAF8A1L188 74 aa6.92□□□□□ -1.3
NRXN1-220ENST00000611589 USH2AO75445 5202 aa6.91□□□□□ -1.3
NRXN1-220ENST00000611589 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
NRXN1-220ENST00000611589 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
NRXN1-220ENST00000611589 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
NRXN1-220ENST00000611589 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
NRXN1-220ENST00000611589 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
NRXN1-220ENST00000611589 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
NRXN1-220ENST00000611589 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
NRXN1-220ENST00000611589 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
NRXN1-220ENST00000611589 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
NRXN1-220ENST00000611589 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
NRXN1-220ENST00000611589 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
NRXN1-220ENST00000611589 KMT2DO14686 5537 aa6.49□□□□□ -1.37
NRXN1-220ENST00000611589 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
NRXN1-220ENST00000611589 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
NRXN1-220ENST00000611589 MT1EP04732 61 aa6.42□□□□□ -1.38
NRXN1-220ENST00000611589 MT1LQ93083 61 aa6.34□□□□□ -1.39
NRXN1-220ENST00000611589 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
NRXN1-220ENST00000611589 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
NRXN1-220ENST00000611589 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
NRXN1-220ENST00000611589 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
NRXN1-220ENST00000611589 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
NRXN1-220ENST00000611589 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms