RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 DNAH5Q8TE73 4624 aa5.24□□□□□ -1.57
CTCFL-216ENST00000608263 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
CTCFL-216ENST00000608263 DNAH2Q9P225 4427 aa5.23□□□□□ -1.57
CTCFL-216ENST00000608263 ALMS1Q8TCU4 4167 aa5.22□□□□□ -1.57
CTCFL-216ENST00000608263 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
CTCFL-216ENST00000608263 DNAH6Q9C0G6 4158 aa5.19□□□□□ -1.58
CTCFL-216ENST00000608263 DYNC2H1Q8NCM8 4307 aaKnown RBP5.18□□□□□ -1.58
CTCFL-216ENST00000608263 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
CTCFL-216ENST00000608263 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
CTCFL-216ENST00000608263 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
CTCFL-216ENST00000608263 KMT2CQ8NEZ4 4911 aaKnown RBP5.16□□□□□ -1.58
CTCFL-216ENST00000608263 HYDINQ4G0P3 5121 aa5.14□□□□□ -1.59
CTCFL-216ENST00000608263 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
CTCFL-216ENST00000608263 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
CTCFL-216ENST00000608263 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
CTCFL-216ENST00000608263 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
CTCFL-216ENST00000608263 RYR2Q92736 4967 aa5.11□□□□□ -1.59
CTCFL-216ENST00000608263 KRTAP10-4P60372 401 aaPredicted RBP5.11□□□□□ -1.59
CTCFL-216ENST00000608263 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
CTCFL-216ENST00000608263 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
CTCFL-216ENST00000608263 KIAA1109Q2LD37 5005 aa5.1□□□□□ -1.59
CTCFL-216ENST00000608263 HECTD4Q9Y4D8 3996 aa5.1□□□□□ -1.59
CTCFL-216ENST00000608263 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
CTCFL-216ENST00000608263 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
CTCFL-216ENST00000608263 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
CTCFL-216ENST00000608263 RYR1P21817 5038 aa5.07□□□□□ -1.6
CTCFL-216ENST00000608263 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
CTCFL-216ENST00000608263 RYR3Q15413 4870 aa5.04□□□□□ -1.6
CTCFL-216ENST00000608263 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
CTCFL-216ENST00000608263 PKHD1P08F94 4074 aa4.96□□□□□ -1.62
CTCFL-216ENST00000608263 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
CTCFL-216ENST00000608263 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
CTCFL-216ENST00000608263 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
CTCFL-216ENST00000608263 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
CTCFL-216ENST00000608263 PKD1P98161 4303 aa4.9□□□□□ -1.63
CTCFL-216ENST00000608263 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
CTCFL-216ENST00000608263 TNP1P09430 55 aa4.88□□□□□ -1.63
CTCFL-216ENST00000608263 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
CTCFL-216ENST00000608263 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
CTCFL-216ENST00000608263 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
CTCFL-216ENST00000608263 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
CTCFL-216ENST00000608263 HSPG2P98160 4391 aa4.76□□□□□ -1.65
CTCFL-216ENST00000608263 LRP2P98164 4655 aa4.75□□□□□ -1.65
CTCFL-216ENST00000608263 HERC2O95714 4834 aa4.73□□□□□ -1.65
CTCFL-216ENST00000608263 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
CTCFL-216ENST00000608263 PCLOQ9Y6V0 5065 aa4.68□□□□□ -1.66
CTCFL-216ENST00000608263 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
CTCFL-216ENST00000608263 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
CTCFL-216ENST00000608263 LPAP08519 4548 aa4.59□□□□□ -1.67
CTCFL-216ENST00000608263 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
CTCFL-216ENST00000608263 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.69
CTCFL-216ENST00000608263 TNXBP22105 4242 aa4.44□□□□□ -1.7
CTCFL-216ENST00000608263 HERC1Q15751 4861 aa4.43□□□□□ -1.7
CTCFL-216ENST00000608263 MT1HP80294 61 aa4.37□□□□□ -1.71
CTCFL-216ENST00000608263 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
CTCFL-216ENST00000608263 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
CTCFL-216ENST00000608263 MUC2Q02817 5179 aa4.34□□□□□ -1.71
CTCFL-216ENST00000608263 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
CTCFL-216ENST00000608263 MT2AP02795 61 aa4.28□□□□□ -1.72
CTCFL-216ENST00000608263 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
CTCFL-216ENST00000608263 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
CTCFL-216ENST00000608263 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
CTCFL-216ENST00000608263 MT1FP04733 61 aa4.24□□□□□ -1.73
CTCFL-216ENST00000608263 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
CTCFL-216ENST00000608263 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
CTCFL-216ENST00000608263 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
CTCFL-216ENST00000608263 INE1O15225 51 aa4.17□□□□□ -1.74
CTCFL-216ENST00000608263 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
CTCFL-216ENST00000608263 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
CTCFL-216ENST00000608263 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
CTCFL-216ENST00000608263 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
CTCFL-216ENST00000608263 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
CTCFL-216ENST00000608263 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
CTCFL-216ENST00000608263 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
CTCFL-216ENST00000608263 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
CTCFL-216ENST00000608263 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
CTCFL-216ENST00000608263 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CTCFL-216ENST00000608263 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
CTCFL-216ENST00000608263 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
CTCFL-216ENST00000608263 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
CTCFL-216ENST00000608263 MT1XP80297 61 aa3.95□□□□□ -1.78
CTCFL-216ENST00000608263 MT1BP07438 61 aa3.94□□□□□ -1.78
CTCFL-216ENST00000608263 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
CTCFL-216ENST00000608263 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
CTCFL-216ENST00000608263 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.79
CTCFL-216ENST00000608263 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
CTCFL-216ENST00000608263 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
CTCFL-216ENST00000608263 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
CTCFL-216ENST00000608263 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
CTCFL-216ENST00000608263 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
CTCFL-216ENST00000608263 LCE2BO14633 110 aa3.8□□□□□ -1.8
CTCFL-216ENST00000608263 USH2AO75445 5202 aa3.75□□□□□ -1.81
CTCFL-216ENST00000608263 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
CTCFL-216ENST00000608263 KMT2DO14686 5537 aa3.71□□□□□ -1.82
CTCFL-216ENST00000608263 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
CTCFL-216ENST00000608263 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
CTCFL-216ENST00000608263 SPRR2EP22531 72 aa3.66□□□□□ -1.82
CTCFL-216ENST00000608263 SPRR2BP35325 72 aa3.66□□□□□ -1.82
CTCFL-216ENST00000608263 SPRR2AP35326 72 aa3.66□□□□□ -1.82
CTCFL-216ENST00000608263 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms