RNA–Protein interactions for RNA: ENST00000608007.1

C1orf61-226, Transcript of chromosome 1 open reading frame 61, humanhuman

TSL 1 (best)

Gene C1orf61, Length 3,138 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-226ENST00000608007 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
C1orf61-226ENST00000608007 SACSQ9NZJ4 4579 aa3.79□□□□□ -1.8
C1orf61-226ENST00000608007 KRTAP10-1P60331 282 aa3.79□□□□□ -1.8
C1orf61-226ENST00000608007 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
C1orf61-226ENST00000608007 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
C1orf61-226ENST00000608007 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
C1orf61-226ENST00000608007 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
C1orf61-226ENST00000608007 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
C1orf61-226ENST00000608007 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
C1orf61-226ENST00000608007 KRTAP1-4P0C5Y4 121 aa3.76□□□□□ -1.81
C1orf61-226ENST00000608007 KIAA1109Q2LD37 5005 aa3.74□□□□□ -1.81
C1orf61-226ENST00000608007 K7ERS5 55 aa3.74□□□□□ -1.81
C1orf61-226ENST00000608007 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
C1orf61-226ENST00000608007 RYR2Q92736 4967 aa3.72□□□□□ -1.81
C1orf61-226ENST00000608007 SMR3BP02814 79 aaPredicted RBP3.72□□□□□ -1.81
C1orf61-226ENST00000608007 FAT1Q14517 4588 aa3.69□□□□□ -1.82
C1orf61-226ENST00000608007 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
C1orf61-226ENST00000608007 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
C1orf61-226ENST00000608007 A0A0D9SG42 100 aa3.68□□□□□ -1.82
C1orf61-226ENST00000608007 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
C1orf61-226ENST00000608007 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.82
C1orf61-226ENST00000608007 RYR1P21817 5038 aa3.63□□□□□ -1.83
C1orf61-226ENST00000608007 PKHD1L1Q86WI1 4243 aa3.63□□□□□ -1.83
C1orf61-226ENST00000608007 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
C1orf61-226ENST00000608007 MYCBP2O75592 4640 aa3.61□□□□□ -1.83
C1orf61-226ENST00000608007 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
C1orf61-226ENST00000608007 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
C1orf61-226ENST00000608007 S4R3F8 94 aa3.6□□□□□ -1.83
C1orf61-226ENST00000608007 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
C1orf61-226ENST00000608007 XP32Q5T750 250 aa3.56□□□□□ -1.84
C1orf61-226ENST00000608007 RPS29P62273 56 aaKnown RBP3.55□□□□□ -1.84
C1orf61-226ENST00000608007 HSPG2P98160 4391 aa3.55□□□□□ -1.84
C1orf61-226ENST00000608007 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
C1orf61-226ENST00000608007 KRTAP10-4P60372 401 aaPredicted RBP3.54□□□□□ -1.84
C1orf61-226ENST00000608007 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
C1orf61-226ENST00000608007 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
C1orf61-226ENST00000608007 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
C1orf61-226ENST00000608007 HERC2O95714 4834 aa3.52□□□□□ -1.85
C1orf61-226ENST00000608007 ABCA13Q86UQ4 5058 aa3.51□□□□□ -1.85
C1orf61-226ENST00000608007 TNXBP22105 4242 aa3.51□□□□□ -1.85
C1orf61-226ENST00000608007 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
C1orf61-226ENST00000608007 HERC1Q15751 4861 aa3.5□□□□□ -1.85
C1orf61-226ENST00000608007 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
C1orf61-226ENST00000608007 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
C1orf61-226ENST00000608007 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
C1orf61-226ENST00000608007 Q5VSD8 79 aa3.49□□□□□ -1.85
C1orf61-226ENST00000608007 LPAP08519 4548 aa3.47□□□□□ -1.85
C1orf61-226ENST00000608007 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
C1orf61-226ENST00000608007 LRP2P98164 4655 aa3.38□□□□□ -1.87
C1orf61-226ENST00000608007 RNF213Q63HN8 5207 aa3.38□□□□□ -1.87
C1orf61-226ENST00000608007 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
C1orf61-226ENST00000608007 M0QZ58 72 aa3.35□□□□□ -1.87
C1orf61-226ENST00000608007 MUC2Q02817 5179 aa3.34□□□□□ -1.87
C1orf61-226ENST00000608007 MT1HL1P0DM35 61 aa3.29□□□□□ -1.88
C1orf61-226ENST00000608007 R4GN34 69 aa3.26□□□□□ -1.89
C1orf61-226ENST00000608007 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
C1orf61-226ENST00000608007 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
C1orf61-226ENST00000608007 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
C1orf61-226ENST00000608007 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
C1orf61-226ENST00000608007 HMCN2Q8NDA2 5059 aa3.16□□□□□ -1.9
C1orf61-226ENST00000608007 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
C1orf61-226ENST00000608007 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
C1orf61-226ENST00000608007 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
C1orf61-226ENST00000608007 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
C1orf61-226ENST00000608007 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
C1orf61-226ENST00000608007 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
C1orf61-226ENST00000608007 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
C1orf61-226ENST00000608007 TNP1P09430 55 aa3.01□□□□□ -1.93
C1orf61-226ENST00000608007 M0R2T5 61 aa2.96□□□□□ -1.94
C1orf61-226ENST00000608007 INE1O15225 51 aa2.95□□□□□ -1.94
C1orf61-226ENST00000608007 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
C1orf61-226ENST00000608007 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
C1orf61-226ENST00000608007 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
C1orf61-226ENST00000608007 USH2AO75445 5202 aa2.89□□□□□ -1.95
C1orf61-226ENST00000608007 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
C1orf61-226ENST00000608007 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
C1orf61-226ENST00000608007 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
C1orf61-226ENST00000608007 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
C1orf61-226ENST00000608007 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
C1orf61-226ENST00000608007 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
C1orf61-226ENST00000608007 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
C1orf61-226ENST00000608007 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
C1orf61-226ENST00000608007 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
C1orf61-226ENST00000608007 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
C1orf61-226ENST00000608007 MT1FP04733 61 aa2.75□□□□□ -1.97
C1orf61-226ENST00000608007 MT1HP80294 61 aa2.75□□□□□ -1.97
C1orf61-226ENST00000608007 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
C1orf61-226ENST00000608007 MT2AP02795 61 aa2.73□□□□□ -1.97
C1orf61-226ENST00000608007 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
C1orf61-226ENST00000608007 KRTAP9-2Q9BYQ4 174 aa2.72□□□□□ -1.97
C1orf61-226ENST00000608007 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
C1orf61-226ENST00000608007 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
C1orf61-226ENST00000608007 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
C1orf61-226ENST00000608007 MT1BP07438 61 aa2.65□□□□□ -1.99
C1orf61-226ENST00000608007 MT1XP80297 61 aa2.65□□□□□ -1.99
C1orf61-226ENST00000608007 KMT2DO14686 5537 aa2.64□□□□□ -1.99
C1orf61-226ENST00000608007 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
C1orf61-226ENST00000608007 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
C1orf61-226ENST00000608007 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
C1orf61-226ENST00000608007 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms