RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 A0A0D9SG42 100 aa2.68□□□□□ -1.98
SCARNA15-201ENST00000607520 PRAC1Q96KF2 57 aa2.68□□□□□ -1.98
SCARNA15-201ENST00000607520 RYR1P21817 5038 aa2.67□□□□□ -1.98
SCARNA15-201ENST00000607520 A6NN06 94 aa2.67□□□□□ -1.98
SCARNA15-201ENST00000607520 DNAH3Q8TD57 4116 aa2.67□□□□□ -1.98
SCARNA15-201ENST00000607520 KRTAP16-1A8MUX0 517 aa2.66□□□□□ -1.98
SCARNA15-201ENST00000607520 KRTAP17-1Q9BYP8 105 aa2.66□□□□□ -1.98
SCARNA15-201ENST00000607520 SACSQ9NZJ4 4579 aa2.66□□□□□ -1.98
SCARNA15-201ENST00000607520 KRTAP19-1Q8IUB9 90 aa2.66□□□□□ -1.98
SCARNA15-201ENST00000607520 LRP1BQ9NZR2 4599 aa2.65□□□□□ -1.98
SCARNA15-201ENST00000607520 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.98
SCARNA15-201ENST00000607520 M0QZ58 72 aa2.65□□□□□ -1.99
SCARNA15-201ENST00000607520 SPINT4Q6UDR6 99 aa2.64□□□□□ -1.99
SCARNA15-201ENST00000607520 ADM2Q7Z4H4 148 aa2.64□□□□□ -1.99
SCARNA15-201ENST00000607520 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
SCARNA15-201ENST00000607520 DNAH7Q8WXX0 4024 aa2.64□□□□□ -1.99
SCARNA15-201ENST00000607520 KRTAP3-1Q9BYR8 98 aa2.64□□□□□ -1.99
SCARNA15-201ENST00000607520 CRIPTQ9P021 101 aa2.63□□□□□ -1.99
SCARNA15-201ENST00000607520 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
SCARNA15-201ENST00000607520 FAT1Q14517 4588 aa2.62□□□□□ -1.99
SCARNA15-201ENST00000607520 HERC2O95714 4834 aa2.62□□□□□ -1.99
SCARNA15-201ENST00000607520 FAT2Q9NYQ8 4349 aa2.61□□□□□ -1.99
SCARNA15-201ENST00000607520 KMT2CQ8NEZ4 4911 aaKnown RBP2.61□□□□□ -1.99
SCARNA15-201ENST00000607520 KRTAP9-2Q9BYQ4 174 aa2.59□□□□□ -1.99
SCARNA15-201ENST00000607520 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
SCARNA15-201ENST00000607520 KRTAP9-6A0A140TA67 174 aa2.57□□□□□ -2
SCARNA15-201ENST00000607520 DNAH6Q9C0G6 4158 aa2.57□□□□□ -2
SCARNA15-201ENST00000607520 ROMO1P60602 79 aa2.56□□□□□ -2
SCARNA15-201ENST00000607520 KMT2AQ03164 3969 aa2.56□□□□□ -2
SCARNA15-201ENST00000607520 DNAH2Q9P225 4427 aa2.56□□□□□ -2
SCARNA15-201ENST00000607520 HYDINQ4G0P3 5121 aa2.55□□□□□ -2
SCARNA15-201ENST00000607520 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
SCARNA15-201ENST00000607520 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
SCARNA15-201ENST00000607520 H0YAA0 97 aa2.53□□□□□ -2
SCARNA15-201ENST00000607520 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2
SCARNA15-201ENST00000607520 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
SCARNA15-201ENST00000607520 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
SCARNA15-201ENST00000607520 LCE3BQ5TA77 95 aa2.52□□□□□ -2.01
SCARNA15-201ENST00000607520 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
SCARNA15-201ENST00000607520 FRAS1Q86XX4 4008 aa2.47□□□□□ -2.01
SCARNA15-201ENST00000607520 HSPG2P98160 4391 aa2.47□□□□□ -2.01
SCARNA15-201ENST00000607520 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
SCARNA15-201ENST00000607520 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
SCARNA15-201ENST00000607520 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
SCARNA15-201ENST00000607520 P0C880 135 aa2.46□□□□□ -2.02
SCARNA15-201ENST00000607520 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
SCARNA15-201ENST00000607520 KRTAP4-1Q9BYQ7 146 aa2.44□□□□□ -2.02
SCARNA15-201ENST00000607520 HECTD4Q9Y4D8 3996 aa2.44□□□□□ -2.02
SCARNA15-201ENST00000607520 MT1HP80294 61 aa2.44□□□□□ -2.02
SCARNA15-201ENST00000607520 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
SCARNA15-201ENST00000607520 KRTAP9-3Q9BYQ3 159 aa2.43□□□□□ -2.02
SCARNA15-201ENST00000607520 HERC1Q15751 4861 aa2.43□□□□□ -2.02
SCARNA15-201ENST00000607520 LRP1Q07954 4544 aaKnown RBP2.43□□□□□ -2.02
SCARNA15-201ENST00000607520 PKHD1P08F94 4074 aa2.42□□□□□ -2.02
SCARNA15-201ENST00000607520 ABCA13Q86UQ4 5058 aa2.42□□□□□ -2.02
SCARNA15-201ENST00000607520 KRTAP10-6P60371 365 aaPredicted RBP2.42□□□□□ -2.02
SCARNA15-201ENST00000607520 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
SCARNA15-201ENST00000607520 TNP1P09430 55 aa2.4□□□□□ -2.02
SCARNA15-201ENST00000607520 MYCBP2O75592 4640 aa2.4□□□□□ -2.03
SCARNA15-201ENST00000607520 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
SCARNA15-201ENST00000607520 C10orf95Q9H7T3 257 aa2.4□□□□□ -2.03
SCARNA15-201ENST00000607520 KRTAP4-8A0A0G2JLE6 195 aa2.39□□□□□ -2.03
SCARNA15-201ENST00000607520 LCE1DQ5T752 114 aa2.38□□□□□ -2.03
SCARNA15-201ENST00000607520 PKD1P98161 4303 aa2.38□□□□□ -2.03
SCARNA15-201ENST00000607520 KRTAP15-1Q3LI76 137 aa2.37□□□□□ -2.03
SCARNA15-201ENST00000607520 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
SCARNA15-201ENST00000607520 KRTAP12-2P59991 146 aa2.36□□□□□ -2.03
SCARNA15-201ENST00000607520 PKHD1L1Q86WI1 4243 aa2.36□□□□□ -2.03
SCARNA15-201ENST00000607520 LRP2P98164 4655 aa2.36□□□□□ -2.03
SCARNA15-201ENST00000607520 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
SCARNA15-201ENST00000607520 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
SCARNA15-201ENST00000607520 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
SCARNA15-201ENST00000607520 MT2AP02795 61 aa2.33□□□□□ -2.04
SCARNA15-201ENST00000607520 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
SCARNA15-201ENST00000607520 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
SCARNA15-201ENST00000607520 KRTAP4-9Q9BYQ8 210 aa2.29□□□□□ -2.04
SCARNA15-201ENST00000607520 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
SCARNA15-201ENST00000607520 MT1FP04733 61 aa2.28□□□□□ -2.04
SCARNA15-201ENST00000607520 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.05
SCARNA15-201ENST00000607520 UBR4Q5T4S7 5183 aa2.25□□□□□ -2.05
SCARNA15-201ENST00000607520 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
SCARNA15-201ENST00000607520 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
SCARNA15-201ENST00000607520 HMCN2Q8NDA2 5059 aa2.24□□□□□ -2.05
SCARNA15-201ENST00000607520 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
SCARNA15-201ENST00000607520 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.06
SCARNA15-201ENST00000607520 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
SCARNA15-201ENST00000607520 TNXBP22105 4242 aa2.19□□□□□ -2.06
SCARNA15-201ENST00000607520 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
SCARNA15-201ENST00000607520 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
SCARNA15-201ENST00000607520 LPAP08519 4548 aa2.18□□□□□ -2.06
SCARNA15-201ENST00000607520 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
SCARNA15-201ENST00000607520 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
SCARNA15-201ENST00000607520 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
SCARNA15-201ENST00000607520 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
SCARNA15-201ENST00000607520 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
SCARNA15-201ENST00000607520 MUC17Q685J3 4493 aa2.08□□□□□ -2.08
SCARNA15-201ENST00000607520 MT1BP07438 61 aa2.07□□□□□ -2.08
SCARNA15-201ENST00000607520 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
SCARNA15-201ENST00000607520 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
SCARNA15-201ENST00000607520 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms