RNA–Protein interactions for RNA: ENST00000601803.5

DDX49-212, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-212ENST00000601803 CSAG1Q6PB30 78 aa8.65□□□□□ -1.02
DDX49-212ENST00000601803 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
DDX49-212ENST00000601803 KRTAP10-6P60371 365 aaPredicted RBP8.63□□□□□ -1.03
DDX49-212ENST00000601803 TNXBP22105 4242 aa8.62□□□□□ -1.03
DDX49-212ENST00000601803 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
DDX49-212ENST00000601803 KMT2CQ8NEZ4 4911 aaKnown RBP8.61□□□□□ -1.03
DDX49-212ENST00000601803 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
DDX49-212ENST00000601803 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
DDX49-212ENST00000601803 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
DDX49-212ENST00000601803 HSPG2P98160 4391 aa8.5□□□□□ -1.05
DDX49-212ENST00000601803 ROMO1P60602 79 aa8.48□□□□□ -1.05
DDX49-212ENST00000601803 LRP1Q07954 4544 aaKnown RBP8.44□□□□□ -1.06
DDX49-212ENST00000601803 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
DDX49-212ENST00000601803 RYR1P21817 5038 aa8.43□□□□□ -1.06
DDX49-212ENST00000601803 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
DDX49-212ENST00000601803 M0QZ58 72 aa8.38□□□□□ -1.07
DDX49-212ENST00000601803 RYR3Q15413 4870 aa8.37□□□□□ -1.07
DDX49-212ENST00000601803 P0C880 135 aa8.37□□□□□ -1.07
DDX49-212ENST00000601803 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
DDX49-212ENST00000601803 A0A0D9SG42 100 aa8.31□□□□□ -1.08
DDX49-212ENST00000601803 SEC61BP60468 96 aaKnown RBP8.28□□□□□ -1.08
DDX49-212ENST00000601803 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
DDX49-212ENST00000601803 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
DDX49-212ENST00000601803 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
DDX49-212ENST00000601803 MYCBP2O75592 4640 aa8.15□□□□□ -1.11
DDX49-212ENST00000601803 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
DDX49-212ENST00000601803 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
DDX49-212ENST00000601803 EPPK1P58107 5090 aaKnown RBP8.05□□□□□ -1.12
DDX49-212ENST00000601803 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
DDX49-212ENST00000601803 R4GN34 69 aa8.03□□□□□ -1.12
DDX49-212ENST00000601803 J3QL48 77 aa8□□□□□ -1.13
DDX49-212ENST00000601803 LRP2P98164 4655 aa7.96□□□□□ -1.14
DDX49-212ENST00000601803 BIRC6Q9NR09 4857 aa7.95□□□□□ -1.14
DDX49-212ENST00000601803 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
DDX49-212ENST00000601803 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
DDX49-212ENST00000601803 KRTAP19-2Q3LHN2 52 aa7.88□□□□□ -1.15
DDX49-212ENST00000601803 LPAP08519 4548 aa7.86□□□□□ -1.15
DDX49-212ENST00000601803 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
DDX49-212ENST00000601803 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
DDX49-212ENST00000601803 HERC2O95714 4834 aa7.76□□□□□ -1.17
DDX49-212ENST00000601803 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
DDX49-212ENST00000601803 H3BS24 57 aa7.72□□□□□ -1.17
DDX49-212ENST00000601803 ABCA13Q86UQ4 5058 aa7.7□□□□□ -1.18
DDX49-212ENST00000601803 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
DDX49-212ENST00000601803 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
DDX49-212ENST00000601803 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
DDX49-212ENST00000601803 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
DDX49-212ENST00000601803 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
DDX49-212ENST00000601803 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
DDX49-212ENST00000601803 NDUFAF8A1L188 74 aa7.42□□□□□ -1.22
DDX49-212ENST00000601803 TNP1P09430 55 aa7.42□□□□□ -1.22
DDX49-212ENST00000601803 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
DDX49-212ENST00000601803 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
DDX49-212ENST00000601803 HERC1Q15751 4861 aa7.34□□□□□ -1.23
DDX49-212ENST00000601803 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
DDX49-212ENST00000601803 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.25
DDX49-212ENST00000601803 MT1HP80294 61 aa7.19□□□□□ -1.26
DDX49-212ENST00000601803 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
DDX49-212ENST00000601803 M0R2T5 61 aa7.17□□□□□ -1.26
DDX49-212ENST00000601803 MT2AP02795 61 aa7.08□□□□□ -1.28
DDX49-212ENST00000601803 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
DDX49-212ENST00000601803 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
DDX49-212ENST00000601803 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
DDX49-212ENST00000601803 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
DDX49-212ENST00000601803 MT1FP04733 61 aa7.03□□□□□ -1.28
DDX49-212ENST00000601803 MUC2Q02817 5179 aa7.01□□□□□ -1.29
DDX49-212ENST00000601803 UBR4Q5T4S7 5183 aa6.91□□□□□ -1.3
DDX49-212ENST00000601803 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
DDX49-212ENST00000601803 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
DDX49-212ENST00000601803 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
DDX49-212ENST00000601803 MT1BP07438 61 aa6.85□□□□□ -1.31
DDX49-212ENST00000601803 A0A0A0MQY5 61 aa6.82□□□□□ -1.32
DDX49-212ENST00000601803 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
DDX49-212ENST00000601803 MT1XP80297 61 aa6.78□□□□□ -1.32
DDX49-212ENST00000601803 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
DDX49-212ENST00000601803 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
DDX49-212ENST00000601803 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
DDX49-212ENST00000601803 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
DDX49-212ENST00000601803 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
DDX49-212ENST00000601803 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
DDX49-212ENST00000601803 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
DDX49-212ENST00000601803 LCE2BO14633 110 aa6.4□□□□□ -1.38
DDX49-212ENST00000601803 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
DDX49-212ENST00000601803 INE1O15225 51 aa6.29□□□□□ -1.4
DDX49-212ENST00000601803 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
DDX49-212ENST00000601803 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
DDX49-212ENST00000601803 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
DDX49-212ENST00000601803 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
DDX49-212ENST00000601803 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
DDX49-212ENST00000601803 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
DDX49-212ENST00000601803 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
DDX49-212ENST00000601803 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
DDX49-212ENST00000601803 MT1EP04732 61 aa5.91□□□□□ -1.46
DDX49-212ENST00000601803 MT1LQ93083 61 aa5.9□□□□□ -1.46
DDX49-212ENST00000601803 USH2AO75445 5202 aa5.89□□□□□ -1.47
DDX49-212ENST00000601803 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
DDX49-212ENST00000601803 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
DDX49-212ENST00000601803 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
DDX49-212ENST00000601803 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
DDX49-212ENST00000601803 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms