RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
VRK3-221ENST00000600284 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
VRK3-221ENST00000600284 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
VRK3-221ENST00000600284 CRIPTQ9P021 101 aa7.02□□□□□ -1.29
VRK3-221ENST00000600284 UQCRQO14949 82 aa7□□□□□ -1.29
VRK3-221ENST00000600284 A0A087WVE0 104 aa6.99□□□□□ -1.29
VRK3-221ENST00000600284 ATOX1O00244 68 aa6.99□□□□□ -1.29
VRK3-221ENST00000600284 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
VRK3-221ENST00000600284 IMUPQ9GZP8 106 aa6.98□□□□□ -1.29
VRK3-221ENST00000600284 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.3
VRK3-221ENST00000600284 H0Y9P7 68 aa6.94□□□□□ -1.3
VRK3-221ENST00000600284 H0YAA0 97 aa6.94□□□□□ -1.3
VRK3-221ENST00000600284 NDUFC1O43677 76 aa6.94□□□□□ -1.3
VRK3-221ENST00000600284 PCP4P48539 62 aa6.94□□□□□ -1.3
VRK3-221ENST00000600284 NEBP20929 6669 aa6.92□□□□□ -1.3
VRK3-221ENST00000600284 A8MUN3 132 aa6.9□□□□□ -1.3
VRK3-221ENST00000600284 SCGB1A1P11684 91 aa6.9□□□□□ -1.3
VRK3-221ENST00000600284 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
VRK3-221ENST00000600284 LINC00643Q86TS7 51 aa6.88□□□□□ -1.31
VRK3-221ENST00000600284 LINC00208Q96KT6 92 aa6.83□□□□□ -1.32
VRK3-221ENST00000600284 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
VRK3-221ENST00000600284 MP68P56378 58 aa6.8□□□□□ -1.32
VRK3-221ENST00000600284 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
VRK3-221ENST00000600284 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
VRK3-221ENST00000600284 KMT2DO14686 5537 aa6.72□□□□□ -1.33
VRK3-221ENST00000600284 H3BPC8 53 aa6.72□□□□□ -1.33
VRK3-221ENST00000600284 MT-ATP8P03928 68 aa6.71□□□□□ -1.34
VRK3-221ENST00000600284 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
VRK3-221ENST00000600284 MDN1Q9NU22 5596 aa6.71□□□□□ -1.34
VRK3-221ENST00000600284 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
VRK3-221ENST00000600284 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
VRK3-221ENST00000600284 R4GN34 69 aa6.66□□□□□ -1.34
VRK3-221ENST00000600284 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
VRK3-221ENST00000600284 DMAC1Q96GE9 116 aa6.64□□□□□ -1.35
VRK3-221ENST00000600284 MT1XP80297 61 aa6.63□□□□□ -1.35
VRK3-221ENST00000600284 ANAPC13Q9BS18 74 aa6.63□□□□□ -1.35
VRK3-221ENST00000600284 P0C880 135 aa6.61□□□□□ -1.35
VRK3-221ENST00000600284 M0QZ58 72 aa6.58□□□□□ -1.36
VRK3-221ENST00000600284 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
VRK3-221ENST00000600284 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
VRK3-221ENST00000600284 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
VRK3-221ENST00000600284 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
VRK3-221ENST00000600284 ACYP2P14621 99 aa6.49□□□□□ -1.37
VRK3-221ENST00000600284 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
VRK3-221ENST00000600284 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
VRK3-221ENST00000600284 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
VRK3-221ENST00000600284 SPRR2EP22531 72 aa6.46□□□□□ -1.38
VRK3-221ENST00000600284 SPRR2BP35325 72 aa6.46□□□□□ -1.38
VRK3-221ENST00000600284 SPRR2AP35326 72 aa6.46□□□□□ -1.38
VRK3-221ENST00000600284 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
VRK3-221ENST00000600284 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
VRK3-221ENST00000600284 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
VRK3-221ENST00000600284 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
VRK3-221ENST00000600284 COX7CP15954 63 aa6.4□□□□□ -1.38
VRK3-221ENST00000600284 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
VRK3-221ENST00000600284 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
VRK3-221ENST00000600284 SERP2Q8N6R1 65 aa6.36□□□□□ -1.39
VRK3-221ENST00000600284 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
VRK3-221ENST00000600284 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
VRK3-221ENST00000600284 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
VRK3-221ENST00000600284 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
VRK3-221ENST00000600284 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
VRK3-221ENST00000600284 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
VRK3-221ENST00000600284 TMEM258P61165 79 aa6.26□□□□□ -1.41
VRK3-221ENST00000600284 SPRR2DP22532 72 aa6.25□□□□□ -1.41
VRK3-221ENST00000600284 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
VRK3-221ENST00000600284 SNURFQ9Y675 71 aa6.24□□□□□ -1.41
VRK3-221ENST00000600284 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
VRK3-221ENST00000600284 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
VRK3-221ENST00000600284 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
VRK3-221ENST00000600284 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
VRK3-221ENST00000600284 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
VRK3-221ENST00000600284 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
VRK3-221ENST00000600284 H7BZZ5 65 aa6.08□□□□□ -1.44
VRK3-221ENST00000600284 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
VRK3-221ENST00000600284 COA5Q86WW8 74 aa6.04□□□□□ -1.44
VRK3-221ENST00000600284 SEC61GP60059 68 aa6.02□□□□□ -1.45
VRK3-221ENST00000600284 SMIM26A0A096LP01 95 aa5.94□□□□□ -1.46
VRK3-221ENST00000600284 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
VRK3-221ENST00000600284 A0A0D9SG42 100 aa5.93□□□□□ -1.46
VRK3-221ENST00000600284 A0A1B0GU33 70 aa5.91□□□□□ -1.46
VRK3-221ENST00000600284 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
VRK3-221ENST00000600284 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
VRK3-221ENST00000600284 MT1EP04732 61 aa5.89□□□□□ -1.47
VRK3-221ENST00000600284 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
VRK3-221ENST00000600284 SPINT4Q6UDR6 99 aa5.87□□□□□ -1.47
VRK3-221ENST00000600284 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
VRK3-221ENST00000600284 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
VRK3-221ENST00000600284 KRTAP12-1P59990 96 aa5.83□□□□□ -1.48
VRK3-221ENST00000600284 V9GYY9 64 aa5.79□□□□□ -1.48
VRK3-221ENST00000600284 A0A1B0GU69 56 aa5.75□□□□□ -1.49
VRK3-221ENST00000600284 MT1GP13640 62 aa5.75□□□□□ -1.49
VRK3-221ENST00000600284 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
VRK3-221ENST00000600284 Q1T7F1 81 aa5.73□□□□□ -1.49
VRK3-221ENST00000600284 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
VRK3-221ENST00000600284 KRTAP4-9Q9BYQ8 210 aa5.66□□□□□ -1.5
VRK3-221ENST00000600284 A8MU10 97 aa5.65□□□□□ -1.5
VRK3-221ENST00000600284 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
VRK3-221ENST00000600284 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
VRK3-221ENST00000600284 MT1LQ93083 61 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms