RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 SPATA8Q6RVD6 105 aa11.16□□□□□ -0.62
GRAMD1A-212ENST00000600231 MIR22HGQ0VDD5 57 aa11.13□□□□□ -0.63
GRAMD1A-212ENST00000600231 A6NN06 94 aa11.1□□□□□ -0.63
GRAMD1A-212ENST00000600231 LRP2P98164 4655 aa11.1□□□□□ -0.63
GRAMD1A-212ENST00000600231 TPRXLQ17RH7 258 aa11.09□□□□□ -0.63
GRAMD1A-212ENST00000600231 ABCA13Q86UQ4 5058 aa11.06□□□□□ -0.64
GRAMD1A-212ENST00000600231 LPAP08519 4548 aa11.05□□□□□ -0.64
GRAMD1A-212ENST00000600231 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
GRAMD1A-212ENST00000600231 A0A1B0GU33 70 aa10.94□□□□□ -0.66
GRAMD1A-212ENST00000600231 KTN1-AS1Q86SY8 53 aa10.92□□□□□ -0.66
GRAMD1A-212ENST00000600231 H0YAA0 97 aa10.92□□□□□ -0.66
GRAMD1A-212ENST00000600231 S4R3F8 94 aa10.91□□□□□ -0.66
GRAMD1A-212ENST00000600231 H1FX-AS1Q4G0G2 97 aa10.9□□□□□ -0.66
GRAMD1A-212ENST00000600231 HERC2O95714 4834 aa10.85□□□□□ -0.67
GRAMD1A-212ENST00000600231 J3QL48 77 aa10.81□□□□□ -0.68
GRAMD1A-212ENST00000600231 KRTAP10-6P60371 365 aaPredicted RBP10.78□□□□□ -0.68
GRAMD1A-212ENST00000600231 RBM12B-AS1Q9P1G2 102 aa10.76□□□□□ -0.69
GRAMD1A-212ENST00000600231 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
GRAMD1A-212ENST00000600231 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
GRAMD1A-212ENST00000600231 SEC61BP60468 96 aaKnown RBP10.67□□□□□ -0.7
GRAMD1A-212ENST00000600231 P0C880 135 aa10.63□□□□□ -0.71
GRAMD1A-212ENST00000600231 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
GRAMD1A-212ENST00000600231 KRTAP13-4Q3LI77 160 aa10.61□□□□□ -0.71
GRAMD1A-212ENST00000600231 CSAG1Q6PB30 78 aa10.59□□□□□ -0.71
GRAMD1A-212ENST00000600231 PRAC1Q96KF2 57 aa10.58□□□□□ -0.72
GRAMD1A-212ENST00000600231 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
GRAMD1A-212ENST00000600231 KRTAP4-1Q9BYQ7 146 aa10.57□□□□□ -0.72
GRAMD1A-212ENST00000600231 A0A0D9SG42 100 aa10.48□□□□□ -0.73
GRAMD1A-212ENST00000600231 K7ERS5 55 aa10.45□□□□□ -0.74
GRAMD1A-212ENST00000600231 PCLOQ9Y6V0 5065 aa10.34□□□□□ -0.75
GRAMD1A-212ENST00000600231 HERC1Q15751 4861 aa10.34□□□□□ -0.75
GRAMD1A-212ENST00000600231 KRTAP19-2Q3LHN2 52 aa10.34□□□□□ -0.75
GRAMD1A-212ENST00000600231 MUC2Q02817 5179 aa10.31□□□□□ -0.76
GRAMD1A-212ENST00000600231 M0QZ58 72 aa10.27□□□□□ -0.77
GRAMD1A-212ENST00000600231 KRTAP12-2P59991 146 aa10.23□□□□□ -0.77
GRAMD1A-212ENST00000600231 HMCN2Q8NDA2 5059 aa10.2□□□□□ -0.78
GRAMD1A-212ENST00000600231 KRTAP12-1P59990 96 aa10.18□□□□□ -0.78
GRAMD1A-212ENST00000600231 ROMO1P60602 79 aa10.16□□□□□ -0.78
GRAMD1A-212ENST00000600231 SPINT4Q6UDR6 99 aa10.16□□□□□ -0.78
GRAMD1A-212ENST00000600231 R4GN34 69 aa10.12□□□□□ -0.79
GRAMD1A-212ENST00000600231 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
GRAMD1A-212ENST00000600231 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
GRAMD1A-212ENST00000600231 KRTAP25-1Q3LHN0 102 aa10.08□□□□□ -0.8
GRAMD1A-212ENST00000600231 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
GRAMD1A-212ENST00000600231 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
GRAMD1A-212ENST00000600231 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
GRAMD1A-212ENST00000600231 FAT4Q6V0I7 4981 aa9.85□□□□□ -0.83
GRAMD1A-212ENST00000600231 C10orf95Q9H7T3 257 aa9.81□□□□□ -0.84
GRAMD1A-212ENST00000600231 UBR4Q5T4S7 5183 aa9.77□□□□□ -0.85
GRAMD1A-212ENST00000600231 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
GRAMD1A-212ENST00000600231 H3BS24 57 aa9.61□□□□□ -0.87
GRAMD1A-212ENST00000600231 MT1HP80294 61 aa9.61□□□□□ -0.87
GRAMD1A-212ENST00000600231 M0R2T5 61 aa9.6□□□□□ -0.87
GRAMD1A-212ENST00000600231 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
GRAMD1A-212ENST00000600231 SPRR2GQ9BYE4 73 aa9.42□□□□□ -0.9
GRAMD1A-212ENST00000600231 KRTAP19-1Q8IUB9 90 aa9.41□□□□□ -0.9
GRAMD1A-212ENST00000600231 MT2AP02795 61 aa9.37□□□□□ -0.91
GRAMD1A-212ENST00000600231 MT1FP04733 61 aa9.36□□□□□ -0.91
GRAMD1A-212ENST00000600231 KRTAP9-8Q9BYQ0 159 aa9.36□□□□□ -0.91
GRAMD1A-212ENST00000600231 KRTAP10-10P60014 251 aa9.33□□□□□ -0.92
GRAMD1A-212ENST00000600231 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
GRAMD1A-212ENST00000600231 TNP1P09430 55 aa9.14□□□□□ -0.95
GRAMD1A-212ENST00000600231 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
GRAMD1A-212ENST00000600231 KRTAP15-1Q3LI76 137 aa9.1□□□□□ -0.95
GRAMD1A-212ENST00000600231 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
GRAMD1A-212ENST00000600231 MT1BP07438 61 aa8.97□□□□□ -0.97
GRAMD1A-212ENST00000600231 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
GRAMD1A-212ENST00000600231 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
GRAMD1A-212ENST00000600231 KRTAP10-5P60370 271 aa8.82□□□□□ -1
GRAMD1A-212ENST00000600231 MT1XP80297 61 aa8.82□□□□□ -1
GRAMD1A-212ENST00000600231 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
GRAMD1A-212ENST00000600231 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
GRAMD1A-212ENST00000600231 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
GRAMD1A-212ENST00000600231 LCE2BO14633 110 aa8.68□□□□□ -1.02
GRAMD1A-212ENST00000600231 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
GRAMD1A-212ENST00000600231 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
GRAMD1A-212ENST00000600231 USH2AO75445 5202 aa8.52□□□□□ -1.05
GRAMD1A-212ENST00000600231 KRTAP10-12P60413 245 aa8.51□□□□□ -1.05
GRAMD1A-212ENST00000600231 KRTAP8-1Q8IUC2 63 aa8.51□□□□□ -1.05
GRAMD1A-212ENST00000600231 SPRR5A0A1B0GTR4 108 aa8.38□□□□□ -1.07
GRAMD1A-212ENST00000600231 LUZP6Q538Z0 58 aa8.38□□□□□ -1.07
GRAMD1A-212ENST00000600231 KRTAP12-3P60328 96 aa8.33□□□□□ -1.08
GRAMD1A-212ENST00000600231 A0A0A0MQY5 61 aa8.29□□□□□ -1.08
GRAMD1A-212ENST00000600231 KMT2DO14686 5537 aa8.18□□□□□ -1.1
GRAMD1A-212ENST00000600231 KRTAP4-8A0A0G2JLE6 195 aa8.12□□□□□ -1.11
GRAMD1A-212ENST00000600231 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
GRAMD1A-212ENST00000600231 KRTAP19-5Q3LI72 72 aa8.11□□□□□ -1.11
GRAMD1A-212ENST00000600231 SSPOA2VEC9 5147 aa8.02□□□□□ -1.12
GRAMD1A-212ENST00000600231 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.14
GRAMD1A-212ENST00000600231 KRTAP19-6Q3LI70 58 aa7.9□□□□□ -1.15
GRAMD1A-212ENST00000600231 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
GRAMD1A-212ENST00000600231 LCE3CQ5T5A8 94 aa7.82□□□□□ -1.16
GRAMD1A-212ENST00000600231 LCE2DQ5TA82 110 aaPredicted RBP7.67□□□□□ -1.18
GRAMD1A-212ENST00000600231 MT1EP04732 61 aa7.66□□□□□ -1.18
GRAMD1A-212ENST00000600231 MT1LQ93083 61 aa7.59□□□□□ -1.19
GRAMD1A-212ENST00000600231 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
GRAMD1A-212ENST00000600231 FCGBPQ9Y6R7 5405 aaPredicted RBP7.56□□□□□ -1.2
GRAMD1A-212ENST00000600231 KRTAP9-6A8MVA2 160 aa7.52□□□□□ -1.21
GRAMD1A-212ENST00000600231 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
GRAMD1A-212ENST00000600231 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms