RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 C9orf92A6NGG3 77 aa8.18□□□□□ -1.1
TRPM4-211ENST00000598697 FAT1Q14517 4588 aa8.15□□□□□ -1.11
TRPM4-211ENST00000598697 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
TRPM4-211ENST00000598697 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
TRPM4-211ENST00000598697 RYR2Q92736 4967 aa8.08□□□□□ -1.12
TRPM4-211ENST00000598697 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
TRPM4-211ENST00000598697 KRTAP13-4Q3LI77 160 aa8.05□□□□□ -1.12
TRPM4-211ENST00000598697 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
TRPM4-211ENST00000598697 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
TRPM4-211ENST00000598697 S4R3F8 94 aa7.97□□□□□ -1.13
TRPM4-211ENST00000598697 RYR3Q15413 4870 aa7.95□□□□□ -1.14
TRPM4-211ENST00000598697 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
TRPM4-211ENST00000598697 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.14
TRPM4-211ENST00000598697 KRTAP12-2P59991 146 aa7.89□□□□□ -1.15
TRPM4-211ENST00000598697 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
TRPM4-211ENST00000598697 Q5VSD8 79 aa7.84□□□□□ -1.15
TRPM4-211ENST00000598697 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
TRPM4-211ENST00000598697 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
TRPM4-211ENST00000598697 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
TRPM4-211ENST00000598697 XP32Q5T750 250 aa7.78□□□□□ -1.16
TRPM4-211ENST00000598697 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
TRPM4-211ENST00000598697 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
TRPM4-211ENST00000598697 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
TRPM4-211ENST00000598697 HSPG2P98160 4391 aa7.71□□□□□ -1.17
TRPM4-211ENST00000598697 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
TRPM4-211ENST00000598697 RYR1P21817 5038 aa7.7□□□□□ -1.18
TRPM4-211ENST00000598697 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
TRPM4-211ENST00000598697 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
TRPM4-211ENST00000598697 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
TRPM4-211ENST00000598697 PKHD1L1Q86WI1 4243 aa7.63□□□□□ -1.19
TRPM4-211ENST00000598697 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
TRPM4-211ENST00000598697 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
TRPM4-211ENST00000598697 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
TRPM4-211ENST00000598697 TNXBP22105 4242 aa7.5□□□□□ -1.21
TRPM4-211ENST00000598697 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
TRPM4-211ENST00000598697 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
TRPM4-211ENST00000598697 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
TRPM4-211ENST00000598697 J3QL48 77 aa7.35□□□□□ -1.23
TRPM4-211ENST00000598697 M0QZ58 72 aa7.35□□□□□ -1.23
TRPM4-211ENST00000598697 LPAP08519 4548 aa7.34□□□□□ -1.24
TRPM4-211ENST00000598697 LRP2P98164 4655 aa7.32□□□□□ -1.24
TRPM4-211ENST00000598697 HERC2O95714 4834 aa7.31□□□□□ -1.24
TRPM4-211ENST00000598697 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
TRPM4-211ENST00000598697 R4GN34 69 aa7.18□□□□□ -1.26
TRPM4-211ENST00000598697 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
TRPM4-211ENST00000598697 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
TRPM4-211ENST00000598697 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.28
TRPM4-211ENST00000598697 HERC1Q15751 4861 aa7.05□□□□□ -1.28
TRPM4-211ENST00000598697 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
TRPM4-211ENST00000598697 MUC2Q02817 5179 aa7.03□□□□□ -1.28
TRPM4-211ENST00000598697 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
TRPM4-211ENST00000598697 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
TRPM4-211ENST00000598697 INE1O15225 51 aa6.86□□□□□ -1.31
TRPM4-211ENST00000598697 RNF213Q63HN8 5207 aa6.78□□□□□ -1.32
TRPM4-211ENST00000598697 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
TRPM4-211ENST00000598697 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
TRPM4-211ENST00000598697 TNP1P09430 55 aa6.71□□□□□ -1.34
TRPM4-211ENST00000598697 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.34
TRPM4-211ENST00000598697 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
TRPM4-211ENST00000598697 M0R2T5 61 aa6.55□□□□□ -1.36
TRPM4-211ENST00000598697 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
TRPM4-211ENST00000598697 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
TRPM4-211ENST00000598697 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
TRPM4-211ENST00000598697 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
TRPM4-211ENST00000598697 MT1HP80294 61 aa6.27□□□□□ -1.41
TRPM4-211ENST00000598697 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
TRPM4-211ENST00000598697 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
TRPM4-211ENST00000598697 MT1FP04733 61 aa6.1□□□□□ -1.43
TRPM4-211ENST00000598697 MT2AP02795 61 aa6.09□□□□□ -1.44
TRPM4-211ENST00000598697 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
TRPM4-211ENST00000598697 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
TRPM4-211ENST00000598697 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
TRPM4-211ENST00000598697 USH2AO75445 5202 aa5.92□□□□□ -1.46
TRPM4-211ENST00000598697 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
TRPM4-211ENST00000598697 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
TRPM4-211ENST00000598697 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
TRPM4-211ENST00000598697 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
TRPM4-211ENST00000598697 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
TRPM4-211ENST00000598697 KMT2DO14686 5537 aa5.77□□□□□ -1.49
TRPM4-211ENST00000598697 MT1BP07438 61 aa5.76□□□□□ -1.49
TRPM4-211ENST00000598697 KRTAP19-8Q3LI54 63 aa5.72□□□□□ -1.49
TRPM4-211ENST00000598697 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
TRPM4-211ENST00000598697 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
TRPM4-211ENST00000598697 LCE2BO14633 110 aa5.67□□□□□ -1.5
TRPM4-211ENST00000598697 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
TRPM4-211ENST00000598697 MT1XP80297 61 aa5.64□□□□□ -1.51
TRPM4-211ENST00000598697 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
TRPM4-211ENST00000598697 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
TRPM4-211ENST00000598697 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
TRPM4-211ENST00000598697 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
TRPM4-211ENST00000598697 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
TRPM4-211ENST00000598697 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
TRPM4-211ENST00000598697 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
TRPM4-211ENST00000598697 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
TRPM4-211ENST00000598697 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
TRPM4-211ENST00000598697 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
TRPM4-211ENST00000598697 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
TRPM4-211ENST00000598697 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
TRPM4-211ENST00000598697 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
TRPM4-211ENST00000598697 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms