RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 H0YAA0 97 aa10.21□□□□□ -0.78
GRAMD1A-207ENST00000598118 PRAC1Q96KF2 57 aa10.19□□□□□ -0.78
GRAMD1A-207ENST00000598118 RPL37P61927 97 aaKnown RBP10.18□□□□□ -0.78
GRAMD1A-207ENST00000598118 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
GRAMD1A-207ENST00000598118 XP32Q5T750 250 aa10.17□□□□□ -0.78
GRAMD1A-207ENST00000598118 A0A1B0GU33 70 aa10.14□□□□□ -0.79
GRAMD1A-207ENST00000598118 H1FX-AS1Q4G0G2 97 aa10.12□□□□□ -0.79
GRAMD1A-207ENST00000598118 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
GRAMD1A-207ENST00000598118 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
GRAMD1A-207ENST00000598118 EPPK1P58107 5090 aaKnown RBP9.98□□□□□ -0.81
GRAMD1A-207ENST00000598118 LPAP08519 4548 aa9.97□□□□□ -0.81
GRAMD1A-207ENST00000598118 KRTAP10-6P60371 365 aaPredicted RBP9.94□□□□□ -0.82
GRAMD1A-207ENST00000598118 LRP2P98164 4655 aa9.92□□□□□ -0.82
GRAMD1A-207ENST00000598118 S4R3F8 94 aa9.91□□□□□ -0.82
GRAMD1A-207ENST00000598118 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
GRAMD1A-207ENST00000598118 KRTAP3-2Q9BYR7 98 aa9.88□□□□□ -0.83
GRAMD1A-207ENST00000598118 KRTAP13-4Q3LI77 160 aa9.84□□□□□ -0.83
GRAMD1A-207ENST00000598118 ABCA13Q86UQ4 5058 aa9.82□□□□□ -0.84
GRAMD1A-207ENST00000598118 TPRXLQ17RH7 258 aa9.79□□□□□ -0.84
GRAMD1A-207ENST00000598118 BIRC6Q9NR09 4857 aa9.79□□□□□ -0.84
GRAMD1A-207ENST00000598118 P0C880 135 aa9.76□□□□□ -0.85
GRAMD1A-207ENST00000598118 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
GRAMD1A-207ENST00000598118 LINC01554Q52M75 96 aa9.75□□□□□ -0.85
GRAMD1A-207ENST00000598118 K7ERS5 55 aa9.71□□□□□ -0.85
GRAMD1A-207ENST00000598118 A0A0D9SG42 100 aa9.71□□□□□ -0.86
GRAMD1A-207ENST00000598118 KRTAP25-1Q3LHN0 102 aa9.62□□□□□ -0.87
GRAMD1A-207ENST00000598118 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
GRAMD1A-207ENST00000598118 ROMO1P60602 79 aa9.54□□□□□ -0.88
GRAMD1A-207ENST00000598118 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
GRAMD1A-207ENST00000598118 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
GRAMD1A-207ENST00000598118 HERC2O95714 4834 aa9.45□□□□□ -0.9
GRAMD1A-207ENST00000598118 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
GRAMD1A-207ENST00000598118 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
GRAMD1A-207ENST00000598118 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
GRAMD1A-207ENST00000598118 M0QZ58 72 aa9.37□□□□□ -0.91
GRAMD1A-207ENST00000598118 SPINT4Q6UDR6 99 aa9.37□□□□□ -0.91
GRAMD1A-207ENST00000598118 J3QL48 77 aa9.33□□□□□ -0.92
GRAMD1A-207ENST00000598118 C10orf95Q9H7T3 257 aa9.26□□□□□ -0.93
GRAMD1A-207ENST00000598118 PCLOQ9Y6V0 5065 aa9.24□□□□□ -0.93
GRAMD1A-207ENST00000598118 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
GRAMD1A-207ENST00000598118 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
GRAMD1A-207ENST00000598118 R4GN34 69 aa9.19□□□□□ -0.94
GRAMD1A-207ENST00000598118 MUC2Q02817 5179 aa9.15□□□□□ -0.94
GRAMD1A-207ENST00000598118 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
GRAMD1A-207ENST00000598118 HERC1Q15751 4861 aa8.95□□□□□ -0.98
GRAMD1A-207ENST00000598118 HMCN2Q8NDA2 5059 aa8.88□□□□□ -0.99
GRAMD1A-207ENST00000598118 H3BS24 57 aa8.84□□□□□ -0.99
GRAMD1A-207ENST00000598118 KRTAP15-1Q3LI76 137 aa8.77□□□□□ -1.01
GRAMD1A-207ENST00000598118 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
GRAMD1A-207ENST00000598118 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
GRAMD1A-207ENST00000598118 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
GRAMD1A-207ENST00000598118 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
GRAMD1A-207ENST00000598118 UBR4Q5T4S7 5183 aa8.52□□□□□ -1.05
GRAMD1A-207ENST00000598118 NDUFAF8A1L188 74 aa8.48□□□□□ -1.05
GRAMD1A-207ENST00000598118 MT1HP80294 61 aa8.45□□□□□ -1.06
GRAMD1A-207ENST00000598118 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
GRAMD1A-207ENST00000598118 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
GRAMD1A-207ENST00000598118 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
GRAMD1A-207ENST00000598118 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
GRAMD1A-207ENST00000598118 M0R2T5 61 aa8.42□□□□□ -1.06
GRAMD1A-207ENST00000598118 TNP1P09430 55 aa8.36□□□□□ -1.07
GRAMD1A-207ENST00000598118 MT1FP04733 61 aa8.3□□□□□ -1.08
GRAMD1A-207ENST00000598118 MT2AP02795 61 aa8.29□□□□□ -1.08
GRAMD1A-207ENST00000598118 KRTAP9-8Q9BYQ0 159 aa8.26□□□□□ -1.09
GRAMD1A-207ENST00000598118 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
GRAMD1A-207ENST00000598118 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
GRAMD1A-207ENST00000598118 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
GRAMD1A-207ENST00000598118 MT1BP07438 61 aa8□□□□□ -1.13
GRAMD1A-207ENST00000598118 LCE3AQ5TA76 89 aa8□□□□□ -1.13
GRAMD1A-207ENST00000598118 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
GRAMD1A-207ENST00000598118 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
GRAMD1A-207ENST00000598118 MT1XP80297 61 aa7.92□□□□□ -1.14
GRAMD1A-207ENST00000598118 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
GRAMD1A-207ENST00000598118 SPRR5A0A1B0GTR4 108 aa7.9□□□□□ -1.14
GRAMD1A-207ENST00000598118 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
GRAMD1A-207ENST00000598118 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
GRAMD1A-207ENST00000598118 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
GRAMD1A-207ENST00000598118 LCE2BO14633 110 aa7.63□□□□□ -1.19
GRAMD1A-207ENST00000598118 KRTAP12-3P60328 96 aa7.59□□□□□ -1.19
GRAMD1A-207ENST00000598118 USH2AO75445 5202 aa7.57□□□□□ -1.2
GRAMD1A-207ENST00000598118 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
GRAMD1A-207ENST00000598118 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
GRAMD1A-207ENST00000598118 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
GRAMD1A-207ENST00000598118 KMT2DO14686 5537 aa7.42□□□□□ -1.22
GRAMD1A-207ENST00000598118 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
GRAMD1A-207ENST00000598118 KRTAP9-2Q9BYQ4 174 aa7.35□□□□□ -1.23
GRAMD1A-207ENST00000598118 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.24
GRAMD1A-207ENST00000598118 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.24
GRAMD1A-207ENST00000598118 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.27
GRAMD1A-207ENST00000598118 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
GRAMD1A-207ENST00000598118 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
GRAMD1A-207ENST00000598118 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
GRAMD1A-207ENST00000598118 SSPOA2VEC9 5147 aa7.03□□□□□ -1.28
GRAMD1A-207ENST00000598118 KRTAP9-6A8MVA2 160 aa6.94□□□□□ -1.3
GRAMD1A-207ENST00000598118 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
GRAMD1A-207ENST00000598118 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
GRAMD1A-207ENST00000598118 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
GRAMD1A-207ENST00000598118 MT1EP04732 61 aa6.85□□□□□ -1.31
GRAMD1A-207ENST00000598118 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
GRAMD1A-207ENST00000598118 MT1LQ93083 61 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms