RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 KLKP1Q107X0 134 aa6.75□□□□□ -1.33
LIG1-215ENST00000597901 Q5VV11 94 aa6.74□□□□□ -1.33
LIG1-215ENST00000597901 A6NN06 94 aa6.72□□□□□ -1.33
LIG1-215ENST00000597901 H0Y9P7 68 aa6.71□□□□□ -1.34
LIG1-215ENST00000597901 ATOX1O00244 68 aa6.69□□□□□ -1.34
LIG1-215ENST00000597901 LINC00643Q86TS7 51 aa6.68□□□□□ -1.34
LIG1-215ENST00000597901 A0A1B0GV90 55 aa6.66□□□□□ -1.34
LIG1-215ENST00000597901 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
LIG1-215ENST00000597901 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
LIG1-215ENST00000597901 NDUFC1O43677 76 aa6.64□□□□□ -1.35
LIG1-215ENST00000597901 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
LIG1-215ENST00000597901 LINC00208Q96KT6 92 aa6.62□□□□□ -1.35
LIG1-215ENST00000597901 A8MUN3 132 aa6.59□□□□□ -1.35
LIG1-215ENST00000597901 H0YAA0 97 aa6.59□□□□□ -1.35
LIG1-215ENST00000597901 OCR1Q9BZK8 76 aa6.58□□□□□ -1.36
LIG1-215ENST00000597901 MP68P56378 58 aa6.56□□□□□ -1.36
LIG1-215ENST00000597901 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
LIG1-215ENST00000597901 NEBP20929 6669 aa6.52□□□□□ -1.37
LIG1-215ENST00000597901 H3BPC8 53 aa6.45□□□□□ -1.38
LIG1-215ENST00000597901 J3QR89 54 aa6.45□□□□□ -1.38
LIG1-215ENST00000597901 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
LIG1-215ENST00000597901 K7ERU9 68 aa6.42□□□□□ -1.38
LIG1-215ENST00000597901 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
LIG1-215ENST00000597901 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.38
LIG1-215ENST00000597901 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
LIG1-215ENST00000597901 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
LIG1-215ENST00000597901 P0C880 135 aa6.37□□□□□ -1.39
LIG1-215ENST00000597901 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
LIG1-215ENST00000597901 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
LIG1-215ENST00000597901 R4GN34 69 aa6.35□□□□□ -1.39
LIG1-215ENST00000597901 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
LIG1-215ENST00000597901 MT1XP80297 61 aa6.33□□□□□ -1.4
LIG1-215ENST00000597901 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
LIG1-215ENST00000597901 M0QZ58 72 aa6.3□□□□□ -1.4
LIG1-215ENST00000597901 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
LIG1-215ENST00000597901 KMT2DO14686 5537 aa6.27□□□□□ -1.41
LIG1-215ENST00000597901 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
LIG1-215ENST00000597901 ACYP2P14621 99 aa6.25□□□□□ -1.41
LIG1-215ENST00000597901 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
LIG1-215ENST00000597901 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
LIG1-215ENST00000597901 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
LIG1-215ENST00000597901 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
LIG1-215ENST00000597901 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
LIG1-215ENST00000597901 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
LIG1-215ENST00000597901 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
LIG1-215ENST00000597901 SPRR2EP22531 72 aa6.17□□□□□ -1.42
LIG1-215ENST00000597901 SPRR2BP35325 72 aa6.17□□□□□ -1.42
LIG1-215ENST00000597901 SPRR2AP35326 72 aa6.17□□□□□ -1.42
LIG1-215ENST00000597901 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
LIG1-215ENST00000597901 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
LIG1-215ENST00000597901 CHKB-CPT1BH3BT56 60 aa6.11□□□□□ -1.43
LIG1-215ENST00000597901 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
LIG1-215ENST00000597901 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
LIG1-215ENST00000597901 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
LIG1-215ENST00000597901 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
LIG1-215ENST00000597901 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
LIG1-215ENST00000597901 PCP4P48539 62 aa6.03□□□□□ -1.44
LIG1-215ENST00000597901 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
LIG1-215ENST00000597901 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
LIG1-215ENST00000597901 SERP2Q8N6R1 65 aa5.99□□□□□ -1.45
LIG1-215ENST00000597901 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
LIG1-215ENST00000597901 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
LIG1-215ENST00000597901 SPRR2DP22532 72 aa5.98□□□□□ -1.45
LIG1-215ENST00000597901 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
LIG1-215ENST00000597901 COA5Q86WW8 74 aa5.87□□□□□ -1.47
LIG1-215ENST00000597901 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
LIG1-215ENST00000597901 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
LIG1-215ENST00000597901 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
LIG1-215ENST00000597901 COX7CP15954 63 aa5.79□□□□□ -1.48
LIG1-215ENST00000597901 SEC61GP60059 68 aa5.79□□□□□ -1.48
LIG1-215ENST00000597901 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
LIG1-215ENST00000597901 A0A0D9SG42 100 aa5.74□□□□□ -1.49
LIG1-215ENST00000597901 SPATA8Q6RVD6 105 aa5.73□□□□□ -1.49
LIG1-215ENST00000597901 A0A1B0GU33 70 aa5.71□□□□□ -1.5
LIG1-215ENST00000597901 H7BZZ5 65 aa5.71□□□□□ -1.5
LIG1-215ENST00000597901 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
LIG1-215ENST00000597901 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
LIG1-215ENST00000597901 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
LIG1-215ENST00000597901 CCDC179H3BU77 68 aa5.65□□□□□ -1.5
LIG1-215ENST00000597901 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
LIG1-215ENST00000597901 MT1EP04732 61 aa5.61□□□□□ -1.51
LIG1-215ENST00000597901 TMEM258P61165 79 aa5.6□□□□□ -1.51
LIG1-215ENST00000597901 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
LIG1-215ENST00000597901 A0A1B0GU69 56 aa5.57□□□□□ -1.52
LIG1-215ENST00000597901 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
LIG1-215ENST00000597901 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
LIG1-215ENST00000597901 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
LIG1-215ENST00000597901 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
LIG1-215ENST00000597901 A8MU10 97 aa5.51□□□□□ -1.53
LIG1-215ENST00000597901 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
LIG1-215ENST00000597901 MT1GP13640 62 aa5.46□□□□□ -1.54
LIG1-215ENST00000597901 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.54
LIG1-215ENST00000597901 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
LIG1-215ENST00000597901 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
LIG1-215ENST00000597901 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
LIG1-215ENST00000597901 TNP1P09430 55 aa5.38□□□□□ -1.55
LIG1-215ENST00000597901 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
LIG1-215ENST00000597901 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
LIG1-215ENST00000597901 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
LIG1-215ENST00000597901 MT1LQ93083 61 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms