RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
CHMP2A-202ENST00000596708 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
CHMP2A-202ENST00000596708 A0A087WVE0 104 aa4.54□□□□□ -1.68
CHMP2A-202ENST00000596708 CYP4F30PQ9H0H9 118 aa4.54□□□□□ -1.68
CHMP2A-202ENST00000596708 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
CHMP2A-202ENST00000596708 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
CHMP2A-202ENST00000596708 SPRR2EP22531 72 aa4.5□□□□□ -1.69
CHMP2A-202ENST00000596708 SPRR2BP35325 72 aa4.5□□□□□ -1.69
CHMP2A-202ENST00000596708 SPRR2AP35326 72 aa4.5□□□□□ -1.69
CHMP2A-202ENST00000596708 NDUFC1O43677 76 aa4.49□□□□□ -1.69
CHMP2A-202ENST00000596708 LOC101927531A0A1B0GV80 90 aa4.48□□□□□ -1.69
CHMP2A-202ENST00000596708 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
CHMP2A-202ENST00000596708 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
CHMP2A-202ENST00000596708 TRAV22A0A0B4J277 110 aa4.47□□□□□ -1.69
CHMP2A-202ENST00000596708 K7EP34 96 aa4.47□□□□□ -1.69
CHMP2A-202ENST00000596708 A8MUN3 132 aa4.46□□□□□ -1.7
CHMP2A-202ENST00000596708 H0YAA0 97 aa4.46□□□□□ -1.7
CHMP2A-202ENST00000596708 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
CHMP2A-202ENST00000596708 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
CHMP2A-202ENST00000596708 ADM2Q7Z4H4 148 aa4.45□□□□□ -1.7
CHMP2A-202ENST00000596708 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
CHMP2A-202ENST00000596708 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
CHMP2A-202ENST00000596708 MT1XP80297 61 aa4.42□□□□□ -1.7
CHMP2A-202ENST00000596708 ACYP1P07311 99 aa4.41□□□□□ -1.7
CHMP2A-202ENST00000596708 COL5A1-AS1Q5SY13 56 aa4.41□□□□□ -1.7
CHMP2A-202ENST00000596708 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
CHMP2A-202ENST00000596708 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
CHMP2A-202ENST00000596708 H0Y9P7 68 aa4.39□□□□□ -1.71
CHMP2A-202ENST00000596708 ETDBQ3ZM63 59 aa4.38□□□□□ -1.71
CHMP2A-202ENST00000596708 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
CHMP2A-202ENST00000596708 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
CHMP2A-202ENST00000596708 ATOX1O00244 68 aa4.37□□□□□ -1.71
CHMP2A-202ENST00000596708 UQCRQO14949 82 aa4.37□□□□□ -1.71
CHMP2A-202ENST00000596708 GTF2H5Q6ZYL4 71 aa4.37□□□□□ -1.71
CHMP2A-202ENST00000596708 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
CHMP2A-202ENST00000596708 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
CHMP2A-202ENST00000596708 F8W1H4 67 aa4.36□□□□□ -1.71
CHMP2A-202ENST00000596708 R4GN34 69 aa4.36□□□□□ -1.71
CHMP2A-202ENST00000596708 SPRR2DP22532 72 aa4.35□□□□□ -1.71
CHMP2A-202ENST00000596708 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
CHMP2A-202ENST00000596708 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
CHMP2A-202ENST00000596708 M0QZ58 72 aa4.31□□□□□ -1.72
CHMP2A-202ENST00000596708 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
CHMP2A-202ENST00000596708 LINC00208Q96KT6 92 aa4.31□□□□□ -1.72
CHMP2A-202ENST00000596708 P0C880 135 aa4.3□□□□□ -1.72
CHMP2A-202ENST00000596708 C20orf197Q8N268 126 aa4.3□□□□□ -1.72
CHMP2A-202ENST00000596708 LINC01554Q52M75 96 aa4.28□□□□□ -1.72
CHMP2A-202ENST00000596708 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
CHMP2A-202ENST00000596708 MP68P56378 58 aa4.25□□□□□ -1.73
CHMP2A-202ENST00000596708 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
CHMP2A-202ENST00000596708 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
CHMP2A-202ENST00000596708 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
CHMP2A-202ENST00000596708 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
CHMP2A-202ENST00000596708 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
CHMP2A-202ENST00000596708 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
CHMP2A-202ENST00000596708 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
CHMP2A-202ENST00000596708 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
CHMP2A-202ENST00000596708 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
CHMP2A-202ENST00000596708 PCP4L1A6NKN8 68 aa4.16□□□□□ -1.74
CHMP2A-202ENST00000596708 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
CHMP2A-202ENST00000596708 H3BPC8 53 aa4.14□□□□□ -1.75
CHMP2A-202ENST00000596708 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
CHMP2A-202ENST00000596708 TRAV7A0A075B6U4 112 aa4.08□□□□□ -1.76
CHMP2A-202ENST00000596708 SCGB1A1P11684 91 aa4.07□□□□□ -1.76
CHMP2A-202ENST00000596708 ACYP2P14621 99 aa4.07□□□□□ -1.76
CHMP2A-202ENST00000596708 SPTSSBQ8NFR3 76 aa4.06□□□□□ -1.76
CHMP2A-202ENST00000596708 CHKB-CPT1BH3BT56 60 aa4□□□□□ -1.77
CHMP2A-202ENST00000596708 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
CHMP2A-202ENST00000596708 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
CHMP2A-202ENST00000596708 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
CHMP2A-202ENST00000596708 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
CHMP2A-202ENST00000596708 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
CHMP2A-202ENST00000596708 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
CHMP2A-202ENST00000596708 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
CHMP2A-202ENST00000596708 MT1EP04732 61 aa3.94□□□□□ -1.78
CHMP2A-202ENST00000596708 J3QR89 54 aa3.93□□□□□ -1.78
CHMP2A-202ENST00000596708 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
CHMP2A-202ENST00000596708 A0A1B0GV90 55 aa3.9□□□□□ -1.79
CHMP2A-202ENST00000596708 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.79
CHMP2A-202ENST00000596708 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
CHMP2A-202ENST00000596708 A0A0D9SG42 100 aa3.85□□□□□ -1.79
CHMP2A-202ENST00000596708 MT1GP13640 62 aa3.85□□□□□ -1.79
CHMP2A-202ENST00000596708 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
CHMP2A-202ENST00000596708 MT4P47944 62 aa3.83□□□□□ -1.8
CHMP2A-202ENST00000596708 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
CHMP2A-202ENST00000596708 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CHMP2A-202ENST00000596708 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
CHMP2A-202ENST00000596708 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
CHMP2A-202ENST00000596708 SPANXA2-OT1Q8N9U9 137 aa3.79□□□□□ -1.8
CHMP2A-202ENST00000596708 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
CHMP2A-202ENST00000596708 SEC61GP60059 68 aa3.77□□□□□ -1.81
CHMP2A-202ENST00000596708 MT1MQ8N339 61 aa3.77□□□□□ -1.81
CHMP2A-202ENST00000596708 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
CHMP2A-202ENST00000596708 MT1LQ93083 61 aa3.73□□□□□ -1.81
CHMP2A-202ENST00000596708 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
CHMP2A-202ENST00000596708 COA5Q86WW8 74 aa3.72□□□□□ -1.81
CHMP2A-202ENST00000596708 A0A1B0GU33 70 aa3.71□□□□□ -1.82
CHMP2A-202ENST00000596708 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
CHMP2A-202ENST00000596708 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
CHMP2A-202ENST00000596708 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms