RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 KLKP1Q107X0 134 aa10.02□□□□□ -0.81
GTF2F1-204ENST00000594965 OCR1Q9BZK8 76 aa10.02□□□□□ -0.81
GTF2F1-204ENST00000594965 KRTAP19-8Q3LI54 63 aa10□□□□□ -0.81
GTF2F1-204ENST00000594965 LINC00208Q96KT6 92 aa9.99□□□□□ -0.81
GTF2F1-204ENST00000594965 MACF1Q9UPN3 7388 aaKnown RBP9.97□□□□□ -0.81
GTF2F1-204ENST00000594965 Q5VV11 94 aa9.94□□□□□ -0.82
GTF2F1-204ENST00000594965 SYNE2Q8WXH0 6885 aaKnown RBP9.91□□□□□ -0.82
GTF2F1-204ENST00000594965 A8MUN3 132 aa9.9□□□□□ -0.82
GTF2F1-204ENST00000594965 J3QR89 54 aa9.9□□□□□ -0.82
GTF2F1-204ENST00000594965 MP68P56378 58 aa9.9□□□□□ -0.82
GTF2F1-204ENST00000594965 NDUFC1O43677 76 aa9.89□□□□□ -0.83
GTF2F1-204ENST00000594965 IMUPQ9GZP8 106 aa9.88□□□□□ -0.83
GTF2F1-204ENST00000594965 CRIPTQ9P021 101 aa9.85□□□□□ -0.83
GTF2F1-204ENST00000594965 H0YAA0 97 aa9.84□□□□□ -0.83
GTF2F1-204ENST00000594965 A6NN06 94 aa9.82□□□□□ -0.84
GTF2F1-204ENST00000594965 H3BPC8 53 aa9.78□□□□□ -0.84
GTF2F1-204ENST00000594965 KRTAP10-5P60370 271 aa9.76□□□□□ -0.85
GTF2F1-204ENST00000594965 KRTAP6-3Q3LI67 103 aa9.76□□□□□ -0.85
GTF2F1-204ENST00000594965 ADM2Q7Z4H4 148 aa9.74□□□□□ -0.85
GTF2F1-204ENST00000594965 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
GTF2F1-204ENST00000594965 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
GTF2F1-204ENST00000594965 MT-ATP8P03928 68 aa9.65□□□□□ -0.86
GTF2F1-204ENST00000594965 K7ERU9 68 aa9.56□□□□□ -0.88
GTF2F1-204ENST00000594965 P0C880 135 aa9.55□□□□□ -0.88
GTF2F1-204ENST00000594965 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
GTF2F1-204ENST00000594965 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
GTF2F1-204ENST00000594965 SMIM20Q8N5G0 67 aa9.48□□□□□ -0.89
GTF2F1-204ENST00000594965 R4GN34 69 aa9.45□□□□□ -0.9
GTF2F1-204ENST00000594965 C20orf197Q8N268 126 aa9.44□□□□□ -0.9
GTF2F1-204ENST00000594965 ACYP2P14621 99 aa9.42□□□□□ -0.9
GTF2F1-204ENST00000594965 M0QZ58 72 aa9.4□□□□□ -0.9
GTF2F1-204ENST00000594965 MT1XP80297 61 aa9.4□□□□□ -0.9
GTF2F1-204ENST00000594965 PLAC4Q8WY50 150 aa9.37□□□□□ -0.91
GTF2F1-204ENST00000594965 KRTAP5-9P26371 169 aa9.36□□□□□ -0.91
GTF2F1-204ENST00000594965 SNURFQ9Y675 71 aa9.34□□□□□ -0.91
GTF2F1-204ENST00000594965 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
GTF2F1-204ENST00000594965 MUC12Q9UKN1 5478 aa9.29□□□□□ -0.92
GTF2F1-204ENST00000594965 NEBP20929 6669 aa9.28□□□□□ -0.92
GTF2F1-204ENST00000594965 SPTSSBQ8NFR3 76 aa9.25□□□□□ -0.93
GTF2F1-204ENST00000594965 LINC01554Q52M75 96 aa9.24□□□□□ -0.93
GTF2F1-204ENST00000594965 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
GTF2F1-204ENST00000594965 SERP2Q8N6R1 65 aa9.2□□□□□ -0.94
GTF2F1-204ENST00000594965 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
GTF2F1-204ENST00000594965 KMT2DO14686 5537 aa9.17□□□□□ -0.94
GTF2F1-204ENST00000594965 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
GTF2F1-204ENST00000594965 SPRR2FQ96RM1 72 aa9.06□□□□□ -0.96
GTF2F1-204ENST00000594965 KRTAP8-1Q8IUC2 63 aa9.03□□□□□ -0.96
GTF2F1-204ENST00000594965 KRTAP4-8A0A0G2JLE6 195 aa9□□□□□ -0.97
GTF2F1-204ENST00000594965 KRTAP4-8Q9BYQ9 185 aa9□□□□□ -0.97
GTF2F1-204ENST00000594965 KRTAP20-1Q3LI63 56 aa8.99□□□□□ -0.97
GTF2F1-204ENST00000594965 MDN1Q9NU22 5596 aa8.99□□□□□ -0.97
GTF2F1-204ENST00000594965 KRTAP10-7P60409 375 aaPredicted RBP8.98□□□□□ -0.97
GTF2F1-204ENST00000594965 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
GTF2F1-204ENST00000594965 COA5Q86WW8 74 aa8.95□□□□□ -0.98
GTF2F1-204ENST00000594965 COX7CP15954 63 aa8.93□□□□□ -0.98
GTF2F1-204ENST00000594965 KRTAP10-12P60413 245 aa8.92□□□□□ -0.98
GTF2F1-204ENST00000594965 SPRR2EP22531 72 aa8.91□□□□□ -0.98
GTF2F1-204ENST00000594965 SPRR2BP35325 72 aa8.91□□□□□ -0.98
GTF2F1-204ENST00000594965 SPRR2AP35326 72 aa8.91□□□□□ -0.98
GTF2F1-204ENST00000594965 CYSTM1Q9H1C7 97 aa8.87□□□□□ -0.99
GTF2F1-204ENST00000594965 LCE1AQ5T7P2 110 aa8.83□□□□□ -1
GTF2F1-204ENST00000594965 H7BZZ5 65 aa8.82□□□□□ -1
GTF2F1-204ENST00000594965 KRTAP2-3P0C7H8 128 aa8.78□□□□□ -1
GTF2F1-204ENST00000594965 KRTAP2-4Q9BYR9 128 aa8.78□□□□□ -1
GTF2F1-204ENST00000594965 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
GTF2F1-204ENST00000594965 SEC61GP60059 68 aa8.7□□□□□ -1.02
GTF2F1-204ENST00000594965 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
GTF2F1-204ENST00000594965 SPATA8Q6RVD6 105 aa8.65□□□□□ -1.02
GTF2F1-204ENST00000594965 A0A0D9SG42 100 aa8.63□□□□□ -1.03
GTF2F1-204ENST00000594965 A0A1B0GU33 70 aa8.61□□□□□ -1.03
GTF2F1-204ENST00000594965 SPRR2DP22532 72 aa8.61□□□□□ -1.03
GTF2F1-204ENST00000594965 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
GTF2F1-204ENST00000594965 KRTAP2-2Q9BYT5 123 aa8.51□□□□□ -1.05
GTF2F1-204ENST00000594965 KRTAP2-1Q9BYU5 128 aa8.51□□□□□ -1.05
GTF2F1-204ENST00000594965 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
GTF2F1-204ENST00000594965 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
GTF2F1-204ENST00000594965 SPINT4Q6UDR6 99 aa8.49□□□□□ -1.05
GTF2F1-204ENST00000594965 A0A1B0GU69 56 aa8.45□□□□□ -1.06
GTF2F1-204ENST00000594965 KRTAP19-7Q3SYF9 63 aa8.42□□□□□ -1.06
GTF2F1-204ENST00000594965 LCE3BQ5TA77 95 aa8.38□□□□□ -1.07
GTF2F1-204ENST00000594965 A8MU10 97 aa8.34□□□□□ -1.07
GTF2F1-204ENST00000594965 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
GTF2F1-204ENST00000594965 MT1EP04732 61 aa8.32□□□□□ -1.08
GTF2F1-204ENST00000594965 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
GTF2F1-204ENST00000594965 LCE5AQ5TCM9 118 aa8.26□□□□□ -1.09
GTF2F1-204ENST00000594965 KRTAP19-3Q7Z4W3 81 aa8.23□□□□□ -1.09
GTF2F1-204ENST00000594965 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
GTF2F1-204ENST00000594965 LINC01558Q9Y6Z2 57 aa8.19□□□□□ -1.1
GTF2F1-204ENST00000594965 PRR15LQ9BU68 103 aa8.18□□□□□ -1.1
GTF2F1-204ENST00000594965 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
GTF2F1-204ENST00000594965 TMEM258P61165 79 aa8.12□□□□□ -1.11
GTF2F1-204ENST00000594965 TNP1P09430 55 aa8.03□□□□□ -1.12
GTF2F1-204ENST00000594965 MT1GP13640 62 aa8.03□□□□□ -1.12
GTF2F1-204ENST00000594965 LCE3AQ5TA76 89 aa8.03□□□□□ -1.12
GTF2F1-204ENST00000594965 MT1LQ93083 61 aa7.96□□□□□ -1.14
GTF2F1-204ENST00000594965 UQCR11O14957 56 aa7.94□□□□□ -1.14
GTF2F1-204ENST00000594965 DSTQ03001 7570 aaKnown RBP7.93□□□□□ -1.14
GTF2F1-204ENST00000594965 MT1MQ8N339 61 aa7.92□□□□□ -1.14
GTF2F1-204ENST00000594965 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
GTF2F1-204ENST00000594965 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms