RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
GCDH-216ENST00000591470 UQCR11O14957 56 aa9.73□□□□□ -0.85
GCDH-216ENST00000591470 SEC61GP60059 68 aa9.72□□□□□ -0.85
GCDH-216ENST00000591470 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
GCDH-216ENST00000591470 MIR22HGQ0VDD5 57 aa9.68□□□□□ -0.86
GCDH-216ENST00000591470 A6NN06 94 aa9.67□□□□□ -0.86
GCDH-216ENST00000591470 PCLOQ9Y6V0 5065 aa9.6□□□□□ -0.87
GCDH-216ENST00000591470 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
GCDH-216ENST00000591470 H1FX-AS1Q4G0G2 97 aa9.51□□□□□ -0.89
GCDH-216ENST00000591470 S4R3F8 94 aa9.51□□□□□ -0.89
GCDH-216ENST00000591470 A0A1B0GU33 70 aa9.5□□□□□ -0.89
GCDH-216ENST00000591470 KTN1-AS1Q86SY8 53 aa9.5□□□□□ -0.89
GCDH-216ENST00000591470 H0YAA0 97 aa9.48□□□□□ -0.89
GCDH-216ENST00000591470 LRP2P98164 4655 aa9.46□□□□□ -0.89
GCDH-216ENST00000591470 J3QL48 77 aa9.45□□□□□ -0.9
GCDH-216ENST00000591470 LPAP08519 4548 aa9.41□□□□□ -0.9
GCDH-216ENST00000591470 RBM12B-AS1Q9P1G2 102 aa9.38□□□□□ -0.91
GCDH-216ENST00000591470 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
GCDH-216ENST00000591470 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
GCDH-216ENST00000591470 HERC1Q15751 4861 aa9.34□□□□□ -0.91
GCDH-216ENST00000591470 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
GCDH-216ENST00000591470 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
GCDH-216ENST00000591470 P0C880 135 aa9.2□□□□□ -0.94
GCDH-216ENST00000591470 KRTAP13-4Q3LI77 160 aa9.19□□□□□ -0.94
GCDH-216ENST00000591470 KRTAP4-1Q9BYQ7 146 aa9.18□□□□□ -0.94
GCDH-216ENST00000591470 MUC17Q685J3 4493 aa9.17□□□□□ -0.94
GCDH-216ENST00000591470 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
GCDH-216ENST00000591470 HMCN2Q8NDA2 5059 aa9.15□□□□□ -0.94
GCDH-216ENST00000591470 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
GCDH-216ENST00000591470 K7ERS5 55 aa9.1□□□□□ -0.95
GCDH-216ENST00000591470 KRTAP19-2Q3LHN2 52 aa9.04□□□□□ -0.96
GCDH-216ENST00000591470 A0A0D9SG42 100 aa9.02□□□□□ -0.96
GCDH-216ENST00000591470 M0QZ58 72 aa8.98□□□□□ -0.97
GCDH-216ENST00000591470 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
GCDH-216ENST00000591470 KRTAP12-1P59990 96 aa8.85□□□□□ -0.99
GCDH-216ENST00000591470 ROMO1P60602 79 aa8.85□□□□□ -0.99
GCDH-216ENST00000591470 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
GCDH-216ENST00000591470 MUC2Q02817 5179 aa8.79□□□□□ -1
GCDH-216ENST00000591470 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
GCDH-216ENST00000591470 R4GN34 69 aa8.77□□□□□ -1.01
GCDH-216ENST00000591470 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
GCDH-216ENST00000591470 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
GCDH-216ENST00000591470 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
GCDH-216ENST00000591470 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
GCDH-216ENST00000591470 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
GCDH-216ENST00000591470 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
GCDH-216ENST00000591470 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
GCDH-216ENST00000591470 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
GCDH-216ENST00000591470 FAT4Q6V0I7 4981 aa8.44□□□□□ -1.06
GCDH-216ENST00000591470 MT1HP80294 61 aa8.38□□□□□ -1.07
GCDH-216ENST00000591470 M0R2T5 61 aa8.29□□□□□ -1.08
GCDH-216ENST00000591470 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
GCDH-216ENST00000591470 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
GCDH-216ENST00000591470 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
GCDH-216ENST00000591470 MT2AP02795 61 aa8.17□□□□□ -1.1
GCDH-216ENST00000591470 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.1
GCDH-216ENST00000591470 MT1FP04733 61 aa8.15□□□□□ -1.11
GCDH-216ENST00000591470 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
GCDH-216ENST00000591470 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
GCDH-216ENST00000591470 PP632Q6XCG6 107 aa8□□□□□ -1.13
GCDH-216ENST00000591470 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
GCDH-216ENST00000591470 TNP1P09430 55 aa7.96□□□□□ -1.13
GCDH-216ENST00000591470 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.13
GCDH-216ENST00000591470 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
GCDH-216ENST00000591470 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
GCDH-216ENST00000591470 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
GCDH-216ENST00000591470 MT1BP07438 61 aa7.83□□□□□ -1.16
GCDH-216ENST00000591470 KRTAP10-5P60370 271 aa7.68□□□□□ -1.18
GCDH-216ENST00000591470 MT1XP80297 61 aa7.68□□□□□ -1.18
GCDH-216ENST00000591470 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
GCDH-216ENST00000591470 LCE2BO14633 110 aa7.54□□□□□ -1.2
GCDH-216ENST00000591470 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
GCDH-216ENST00000591470 NDUFAF8A1L188 74 aa7.5□□□□□ -1.21
GCDH-216ENST00000591470 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
GCDH-216ENST00000591470 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
GCDH-216ENST00000591470 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
GCDH-216ENST00000591470 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
GCDH-216ENST00000591470 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
GCDH-216ENST00000591470 H3BS24 57 aa7.38□□□□□ -1.23
GCDH-216ENST00000591470 USH2AO75445 5202 aa7.36□□□□□ -1.23
GCDH-216ENST00000591470 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
GCDH-216ENST00000591470 LUZP6Q538Z0 58 aa7.26□□□□□ -1.25
GCDH-216ENST00000591470 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
GCDH-216ENST00000591470 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
GCDH-216ENST00000591470 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
GCDH-216ENST00000591470 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
GCDH-216ENST00000591470 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.26
GCDH-216ENST00000591470 KRTAP19-5Q3LI72 72 aa7.04□□□□□ -1.28
GCDH-216ENST00000591470 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
GCDH-216ENST00000591470 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
GCDH-216ENST00000591470 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
GCDH-216ENST00000591470 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
GCDH-216ENST00000591470 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
GCDH-216ENST00000591470 KMT2DO14686 5537 aa6.84□□□□□ -1.31
GCDH-216ENST00000591470 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
GCDH-216ENST00000591470 MT1EP04732 61 aa6.69□□□□□ -1.34
GCDH-216ENST00000591470 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
GCDH-216ENST00000591470 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
GCDH-216ENST00000591470 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
GCDH-216ENST00000591470 MT1LQ93083 61 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms