RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 MT-ATP8P03928 68 aa3.26□□□□□ -1.89
VPS4B-205ENST00000591383 HRES1P13985 223 aa3.26□□□□□ -1.89
VPS4B-205ENST00000591383 TP53AIP1Q9HCN2 124 aa3.26□□□□□ -1.89
VPS4B-205ENST00000591383 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
VPS4B-205ENST00000591383 TRAV22A0A0B4J277 110 aa3.25□□□□□ -1.89
VPS4B-205ENST00000591383 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
VPS4B-205ENST00000591383 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
VPS4B-205ENST00000591383 V9GYY9 64 aa3.25□□□□□ -1.89
VPS4B-205ENST00000591383 H0Y9P7 68 aa3.23□□□□□ -1.89
VPS4B-205ENST00000591383 M0R2T5 61 aa3.23□□□□□ -1.89
VPS4B-205ENST00000591383 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
VPS4B-205ENST00000591383 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
VPS4B-205ENST00000591383 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
VPS4B-205ENST00000591383 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
VPS4B-205ENST00000591383 UQCRQO14949 82 aa3.22□□□□□ -1.89
VPS4B-205ENST00000591383 MT1HP80294 61 aa3.22□□□□□ -1.89
VPS4B-205ENST00000591383 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
VPS4B-205ENST00000591383 ATOX1O00244 68 aa3.2□□□□□ -1.9
VPS4B-205ENST00000591383 MP68P56378 58 aa3.19□□□□□ -1.9
VPS4B-205ENST00000591383 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
VPS4B-205ENST00000591383 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
VPS4B-205ENST00000591383 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
VPS4B-205ENST00000591383 SMIM26A0A096LP01 95 aa3.17□□□□□ -1.9
VPS4B-205ENST00000591383 C1orf64Q8NEQ6 169 aa3.17□□□□□ -1.9
VPS4B-205ENST00000591383 CYP4F30PQ9H0H9 118 aa3.17□□□□□ -1.9
VPS4B-205ENST00000591383 TRAV7A0A075B6U4 112 aa3.14□□□□□ -1.91
VPS4B-205ENST00000591383 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
VPS4B-205ENST00000591383 H1FX-AS1Q4G0G2 97 aa3.14□□□□□ -1.91
VPS4B-205ENST00000591383 C5orf47Q569G3 176 aa3.14□□□□□ -1.91
VPS4B-205ENST00000591383 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
VPS4B-205ENST00000591383 H3BPC8 53 aa3.12□□□□□ -1.91
VPS4B-205ENST00000591383 KLKP1Q107X0 134 aa3.12□□□□□ -1.91
VPS4B-205ENST00000591383 S4R3F8 94 aa3.12□□□□□ -1.91
VPS4B-205ENST00000591383 C20orf197Q8N268 126 aa3.09□□□□□ -1.91
VPS4B-205ENST00000591383 SERP2Q8N6R1 65 aa3.09□□□□□ -1.91
VPS4B-205ENST00000591383 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
VPS4B-205ENST00000591383 PSPHP1O15172 72 aa3.08□□□□□ -1.92
VPS4B-205ENST00000591383 LCA10Q71F78 164 aa3.07□□□□□ -1.92
VPS4B-205ENST00000591383 A8MUN3 132 aa3.06□□□□□ -1.92
VPS4B-205ENST00000591383 MT2AP02795 61 aa3.05□□□□□ -1.92
VPS4B-205ENST00000591383 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
VPS4B-205ENST00000591383 ANAPC13Q9BS18 74 aa3.05□□□□□ -1.92
VPS4B-205ENST00000591383 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
VPS4B-205ENST00000591383 MT1FP04733 61 aa3.03□□□□□ -1.92
VPS4B-205ENST00000591383 COX7CP15954 63 aa3.03□□□□□ -1.92
VPS4B-205ENST00000591383 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
VPS4B-205ENST00000591383 CSAG1Q6PB30 78 aa3.03□□□□□ -1.92
VPS4B-205ENST00000591383 NDUFC1O43677 76 aa3.02□□□□□ -1.93
VPS4B-205ENST00000591383 PRO0628Q9UI54 55 aa3□□□□□ -1.93
VPS4B-205ENST00000591383 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
VPS4B-205ENST00000591383 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
VPS4B-205ENST00000591383 A8MU10 97 aa2.98□□□□□ -1.93
VPS4B-205ENST00000591383 ACYP2P14621 99 aa2.98□□□□□ -1.93
VPS4B-205ENST00000591383 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
VPS4B-205ENST00000591383 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
VPS4B-205ENST00000591383 CCDC179H3BU77 68 aa2.97□□□□□ -1.93
VPS4B-205ENST00000591383 H7BZZ5 65 aa2.95□□□□□ -1.94
VPS4B-205ENST00000591383 ADM2Q7Z4H4 148 aa2.94□□□□□ -1.94
VPS4B-205ENST00000591383 SPTSSBQ8NFR3 76 aa2.94□□□□□ -1.94
VPS4B-205ENST00000591383 COA5Q86WW8 74 aa2.93□□□□□ -1.94
VPS4B-205ENST00000591383 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
VPS4B-205ENST00000591383 USH2AO75445 5202 aa2.92□□□□□ -1.94
VPS4B-205ENST00000591383 H0YAA0 97 aa2.91□□□□□ -1.94
VPS4B-205ENST00000591383 ATP5EP56381 51 aaPredicted RBP2.89□□□□□ -1.95
VPS4B-205ENST00000591383 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
VPS4B-205ENST00000591383 P0C880 135 aa2.88□□□□□ -1.95
VPS4B-205ENST00000591383 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
VPS4B-205ENST00000591383 CRIPTQ9P021 101 aa2.87□□□□□ -1.95
VPS4B-205ENST00000591383 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
VPS4B-205ENST00000591383 TMEM258P61165 79 aa2.86□□□□□ -1.95
VPS4B-205ENST00000591383 M0QZ58 72 aa2.85□□□□□ -1.95
VPS4B-205ENST00000591383 Q5VV11 94 aa2.85□□□□□ -1.95
VPS4B-205ENST00000591383 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
VPS4B-205ENST00000591383 R4GN34 69 aa2.85□□□□□ -1.95
VPS4B-205ENST00000591383 LINC01554Q52M75 96 aa2.83□□□□□ -1.96
VPS4B-205ENST00000591383 MT1BP07438 61 aa2.8□□□□□ -1.96
VPS4B-205ENST00000591383 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
VPS4B-205ENST00000591383 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
VPS4B-205ENST00000591383 SERP1Q9Y6X1 66 aa2.8□□□□□ -1.96
VPS4B-205ENST00000591383 A0A1B0GU69 56 aa2.78□□□□□ -1.96
VPS4B-205ENST00000591383 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
VPS4B-205ENST00000591383 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
VPS4B-205ENST00000591383 PLAC4Q8WY50 150 aa2.76□□□□□ -1.97
VPS4B-205ENST00000591383 PRR15LQ9BU68 103 aa2.75□□□□□ -1.97
VPS4B-205ENST00000591383 A6NN06 94 aa2.74□□□□□ -1.97
VPS4B-205ENST00000591383 K7ERS5 55 aa2.74□□□□□ -1.97
VPS4B-205ENST00000591383 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
VPS4B-205ENST00000591383 A0A0D9SG42 100 aa2.73□□□□□ -1.97
VPS4B-205ENST00000591383 A0A1B0GU33 70 aa2.73□□□□□ -1.97
VPS4B-205ENST00000591383 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
VPS4B-205ENST00000591383 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
VPS4B-205ENST00000591383 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
VPS4B-205ENST00000591383 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
VPS4B-205ENST00000591383 PRO2289Q9P1D8 64 aa2.69□□□□□ -1.98
VPS4B-205ENST00000591383 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
VPS4B-205ENST00000591383 MT1XP80297 61 aa2.67□□□□□ -1.98
VPS4B-205ENST00000591383 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
VPS4B-205ENST00000591383 A6NED7 52 aa2.66□□□□□ -1.98
VPS4B-205ENST00000591383 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
VPS4B-205ENST00000591383 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms