RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 UBL5Q9BZL1 73 aa5.47□□□□□ -1.53
SMAD4-211ENST00000590499 SSPOA2VEC9 5147 aa5.46□□□□□ -1.54
SMAD4-211ENST00000590499 MT1FP04733 61 aa5.45□□□□□ -1.54
SMAD4-211ENST00000590499 ETDBQ3ZM63 59 aa5.45□□□□□ -1.54
SMAD4-211ENST00000590499 HCG22E2RYF7 251 aa5.44□□□□□ -1.54
SMAD4-211ENST00000590499 C7orf65Q6ZTY9 151 aa5.42□□□□□ -1.54
SMAD4-211ENST00000590499 CXCL6P80162 114 aa5.41□□□□□ -1.54
SMAD4-211ENST00000590499 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
SMAD4-211ENST00000590499 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
SMAD4-211ENST00000590499 FAM240AA0A1B0GVK7 77 aa5.32□□□□□ -1.56
SMAD4-211ENST00000590499 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
SMAD4-211ENST00000590499 ACYP1P07311 99 aa5.31□□□□□ -1.56
SMAD4-211ENST00000590499 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
SMAD4-211ENST00000590499 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
SMAD4-211ENST00000590499 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-211ENST00000590499 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
SMAD4-211ENST00000590499 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
SMAD4-211ENST00000590499 A0A1B0GV90 55 aa5.23□□□□□ -1.57
SMAD4-211ENST00000590499 SEC61GP60059 68 aa5.23□□□□□ -1.57
SMAD4-211ENST00000590499 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
SMAD4-211ENST00000590499 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
SMAD4-211ENST00000590499 TRAV22A0A0B4J277 110 aa5.21□□□□□ -1.58
SMAD4-211ENST00000590499 HIST1H4AP62805 103 aaKnown RBP5.2□□□□□ -1.58
SMAD4-211ENST00000590499 LINC00643Q86TS7 51 aa5.2□□□□□ -1.58
SMAD4-211ENST00000590499 C5orf47Q569G3 176 aa5.19□□□□□ -1.58
SMAD4-211ENST00000590499 S4R3F8 94 aa5.19□□□□□ -1.58
SMAD4-211ENST00000590499 LOC101927531A0A1B0GV80 90 aa5.18□□□□□ -1.58
SMAD4-211ENST00000590499 LCA10Q71F78 164 aa5.18□□□□□ -1.58
SMAD4-211ENST00000590499 A0A087WVE0 104 aa5.17□□□□□ -1.58
SMAD4-211ENST00000590499 UQCRQO14949 82 aa5.16□□□□□ -1.58
SMAD4-211ENST00000590499 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
SMAD4-211ENST00000590499 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
SMAD4-211ENST00000590499 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
SMAD4-211ENST00000590499 H0Y9P7 68 aa5.13□□□□□ -1.59
SMAD4-211ENST00000590499 ATOX1O00244 68 aa5.13□□□□□ -1.59
SMAD4-211ENST00000590499 OCR1Q9BZK8 76 aa5.1□□□□□ -1.59
SMAD4-211ENST00000590499 FAM236AA0A1B0GUQ0 79 aa5.08□□□□□ -1.6
SMAD4-211ENST00000590499 FAM236BA0A1B0GV22 79 aa5.08□□□□□ -1.6
SMAD4-211ENST00000590499 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
SMAD4-211ENST00000590499 J3QR89 54 aa5.07□□□□□ -1.6
SMAD4-211ENST00000590499 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
SMAD4-211ENST00000590499 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
SMAD4-211ENST00000590499 LINC00208Q96KT6 92 aa5.05□□□□□ -1.6
SMAD4-211ENST00000590499 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
SMAD4-211ENST00000590499 A8MUN3 132 aa5.02□□□□□ -1.61
SMAD4-211ENST00000590499 MT1BP07438 61 aa5.02□□□□□ -1.61
SMAD4-211ENST00000590499 MP68P56378 58 aa5.02□□□□□ -1.61
SMAD4-211ENST00000590499 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
SMAD4-211ENST00000590499 NDUFC1O43677 76 aa4.99□□□□□ -1.61
SMAD4-211ENST00000590499 H3BPC8 53 aa4.98□□□□□ -1.61
SMAD4-211ENST00000590499 H0YAA0 97 aa4.97□□□□□ -1.61
SMAD4-211ENST00000590499 Q5VV11 94 aa4.97□□□□□ -1.61
SMAD4-211ENST00000590499 IMUPQ9GZP8 106 aa4.97□□□□□ -1.61
SMAD4-211ENST00000590499 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
SMAD4-211ENST00000590499 SCGB1A1P11684 91 aa4.94□□□□□ -1.62
SMAD4-211ENST00000590499 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
SMAD4-211ENST00000590499 MT-ATP8P03928 68 aa4.93□□□□□ -1.62
SMAD4-211ENST00000590499 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
SMAD4-211ENST00000590499 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
SMAD4-211ENST00000590499 K7ERU9 68 aa4.9□□□□□ -1.63
SMAD4-211ENST00000590499 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
SMAD4-211ENST00000590499 A6NN06 94 aa4.89□□□□□ -1.63
SMAD4-211ENST00000590499 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
SMAD4-211ENST00000590499 TRAV7A0A075B6U4 112 aa4.85□□□□□ -1.63
SMAD4-211ENST00000590499 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
SMAD4-211ENST00000590499 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.63
SMAD4-211ENST00000590499 P0C880 135 aa4.81□□□□□ -1.64
SMAD4-211ENST00000590499 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
SMAD4-211ENST00000590499 NEBP20929 6669 aa4.78□□□□□ -1.64
SMAD4-211ENST00000590499 C20orf197Q8N268 126 aa4.77□□□□□ -1.65
SMAD4-211ENST00000590499 ACYP2P14621 99 aa4.76□□□□□ -1.65
SMAD4-211ENST00000590499 V9GYY9 64 aa4.76□□□□□ -1.65
SMAD4-211ENST00000590499 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
SMAD4-211ENST00000590499 R4GN34 69 aa4.75□□□□□ -1.65
SMAD4-211ENST00000590499 SNURFQ9Y675 71 aa4.74□□□□□ -1.65
SMAD4-211ENST00000590499 M0QZ58 72 aa4.72□□□□□ -1.65
SMAD4-211ENST00000590499 MT1XP80297 61 aa4.72□□□□□ -1.65
SMAD4-211ENST00000590499 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
SMAD4-211ENST00000590499 KMT2DO14686 5537 aa4.69□□□□□ -1.66
SMAD4-211ENST00000590499 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
SMAD4-211ENST00000590499 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
SMAD4-211ENST00000590499 SPTSSBQ8NFR3 76 aa4.68□□□□□ -1.66
SMAD4-211ENST00000590499 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
SMAD4-211ENST00000590499 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
SMAD4-211ENST00000590499 MDN1Q9NU22 5596 aa4.65□□□□□ -1.66
SMAD4-211ENST00000590499 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
SMAD4-211ENST00000590499 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
SMAD4-211ENST00000590499 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
SMAD4-211ENST00000590499 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
SMAD4-211ENST00000590499 COX7CP15954 63 aa4.57□□□□□ -1.68
SMAD4-211ENST00000590499 COA5Q86WW8 74 aa4.55□□□□□ -1.68
SMAD4-211ENST00000590499 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
SMAD4-211ENST00000590499 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
SMAD4-211ENST00000590499 H7BZZ5 65 aa4.51□□□□□ -1.69
SMAD4-211ENST00000590499 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
SMAD4-211ENST00000590499 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
SMAD4-211ENST00000590499 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
SMAD4-211ENST00000590499 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
SMAD4-211ENST00000590499 SPRR2EP22531 72 aa4.42□□□□□ -1.7
SMAD4-211ENST00000590499 SPRR2BP35325 72 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms