RNA–Protein interactions for RNA: ENST00000590311.5

ABCA6-205, Transcript of ATP binding cassette subfamily A member 6, humanhuman

TSL 1 (best)

Gene ABCA6, Length 8,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6-205ENST00000590311 KRTAP3-2Q9BYR7 98 aa2.06□□□□□ -2.08
ABCA6-205ENST00000590311 DNAH14Q0VDD8 3507 aa2.06□□□□□ -2.08
ABCA6-205ENST00000590311 MUC3AQ02505 3323 aa2.05□□□□□ -2.08
ABCA6-205ENST00000590311 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
ABCA6-205ENST00000590311 LRP1BQ9NZR2 4599 aa2.03□□□□□ -2.08
ABCA6-205ENST00000590311 DNAH10Q8IVF4 4471 aa2.03□□□□□ -2.08
ABCA6-205ENST00000590311 DNAH11Q96DT5 4516 aa2.02□□□□□ -2.09
ABCA6-205ENST00000590311 KRTAP12-2P59991 146 aa2.02□□□□□ -2.09
ABCA6-205ENST00000590311 SMG1Q96Q15 3661 aaKnown RBP2.01□□□□□ -2.09
ABCA6-205ENST00000590311 KRTAP3-1Q9BYR8 98 aa2.01□□□□□ -2.09
ABCA6-205ENST00000590311 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
ABCA6-205ENST00000590311 CUBNO60494 3623 aa2□□□□□ -2.09
ABCA6-205ENST00000590311 KRTAP13-4Q3LI77 160 aa1.99□□□□□ -2.09
ABCA6-205ENST00000590311 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
ABCA6-205ENST00000590311 CSMD3Q7Z407 3707 aa1.98□□□□□ -2.09
ABCA6-205ENST00000590311 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
ABCA6-205ENST00000590311 PRKDCP78527 4128 aaKnown RBP1.97□□□□□ -2.09
ABCA6-205ENST00000590311 ALMS1Q8TCU4 4167 aa1.97□□□□□ -2.09
ABCA6-205ENST00000590311 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
ABCA6-205ENST00000590311 PLECQ15149 4684 aaKnown RBP1.96□□□□□ -2.1
ABCA6-205ENST00000590311 VPS13CQ709C8 3753 aa1.95□□□□□ -2.1
ABCA6-205ENST00000590311 HERC1Q15751 4861 aa1.95□□□□□ -2.1
ABCA6-205ENST00000590311 ASPMQ8IZT6 3477 aa1.94□□□□□ -2.1
ABCA6-205ENST00000590311 KRTAP9-2Q9BYQ4 174 aa1.94□□□□□ -2.1
ABCA6-205ENST00000590311 DNAH7Q8WXX0 4024 aa1.94□□□□□ -2.1
ABCA6-205ENST00000590311 DNAH5Q8TE73 4624 aa1.94□□□□□ -2.1
ABCA6-205ENST00000590311 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
ABCA6-205ENST00000590311 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
ABCA6-205ENST00000590311 SPEGQ15772 3267 aa1.92□□□□□ -2.1
ABCA6-205ENST00000590311 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
ABCA6-205ENST00000590311 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
ABCA6-205ENST00000590311 VPS13BQ7Z7G8 4022 aa1.9□□□□□ -2.11
ABCA6-205ENST00000590311 HUWE1Q7Z6Z7 4374 aaKnown RBP1.9□□□□□ -2.11
ABCA6-205ENST00000590311 PKHD1P08F94 4074 aa1.89□□□□□ -2.11
ABCA6-205ENST00000590311 DNAH1Q9P2D7 4330 aa1.89□□□□□ -2.11
ABCA6-205ENST00000590311 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
ABCA6-205ENST00000590311 DYNC2H1Q8NCM8 4307 aaKnown RBP1.88□□□□□ -2.11
ABCA6-205ENST00000590311 CSMD1Q96PZ7 3565 aa1.88□□□□□ -2.11
ABCA6-205ENST00000590311 USH2AO75445 5202 aa1.87□□□□□ -2.11
ABCA6-205ENST00000590311 DYNC1H1Q14204 4646 aaKnown RBP1.87□□□□□ -2.11
ABCA6-205ENST00000590311 ANK3Q12955 4377 aaKnown RBP1.87□□□□□ -2.11
ABCA6-205ENST00000590311 CSMD2Q7Z408 3487 aa1.87□□□□□ -2.11
ABCA6-205ENST00000590311 LCE2AQ5TA79 106 aaPredicted RBP1.85□□□□□ -2.11
ABCA6-205ENST00000590311 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
ABCA6-205ENST00000590311 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
ABCA6-205ENST00000590311 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
ABCA6-205ENST00000590311 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
ABCA6-205ENST00000590311 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.12
ABCA6-205ENST00000590311 STARD9Q9P2P6 4700 aa1.83□□□□□ -2.12
ABCA6-205ENST00000590311 KRTAP9-7A8MTY7 169 aa1.82□□□□□ -2.12
ABCA6-205ENST00000590311 VPS13DQ5THJ4 4388 aa1.81□□□□□ -2.12
ABCA6-205ENST00000590311 FRAS1Q86XX4 4008 aa1.81□□□□□ -2.12
ABCA6-205ENST00000590311 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
ABCA6-205ENST00000590311 HSPG2P98160 4391 aa1.81□□□□□ -2.12
ABCA6-205ENST00000590311 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
ABCA6-205ENST00000590311 SACSQ9NZJ4 4579 aa1.8□□□□□ -2.12
ABCA6-205ENST00000590311 LORP23490 312 aaPredicted RBP1.79□□□□□ -2.12
ABCA6-205ENST00000590311 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
ABCA6-205ENST00000590311 KRTAP4-5Q9BYR2 181 aa1.79□□□□□ -2.12
ABCA6-205ENST00000590311 DNAH2Q9P225 4427 aa1.78□□□□□ -2.12
ABCA6-205ENST00000590311 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
ABCA6-205ENST00000590311 SVEP1Q4LDE5 3571 aa1.76□□□□□ -2.13
ABCA6-205ENST00000590311 FAT1Q14517 4588 aa1.76□□□□□ -2.13
ABCA6-205ENST00000590311 DNAH9Q9NYC9 4486 aa1.75□□□□□ -2.13
ABCA6-205ENST00000590311 KRTAP10-12P60413 245 aa1.73□□□□□ -2.13
ABCA6-205ENST00000590311 APOBP04114 4563 aaKnown RBP1.73□□□□□ -2.13
ABCA6-205ENST00000590311 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
ABCA6-205ENST00000590311 MT2AP02795 61 aa1.73□□□□□ -2.13
ABCA6-205ENST00000590311 KRTAP10-5P60370 271 aa1.72□□□□□ -2.13
ABCA6-205ENST00000590311 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
ABCA6-205ENST00000590311 TNXBP22105 4242 aa1.71□□□□□ -2.14
ABCA6-205ENST00000590311 DNAH8Q96JB1 4490 aa1.71□□□□□ -2.14
ABCA6-205ENST00000590311 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
ABCA6-205ENST00000590311 KRTAP19-1Q8IUB9 90 aa1.71□□□□□ -2.14
ABCA6-205ENST00000590311 SPRR5A0A1B0GTR4 108 aa1.7□□□□□ -2.14
ABCA6-205ENST00000590311 KRTAP19-2Q3LHN2 52 aa1.7□□□□□ -2.14
ABCA6-205ENST00000590311 MT1HP80294 61 aa1.69□□□□□ -2.14
ABCA6-205ENST00000590311 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
ABCA6-205ENST00000590311 FLGP20930 4061 aaPredicted RBP1.68□□□□□ -2.14
ABCA6-205ENST00000590311 LCE2CQ5TA81 110 aa1.66□□□□□ -2.14
ABCA6-205ENST00000590311 KRTAP4-1Q9BYQ7 146 aa1.66□□□□□ -2.14
ABCA6-205ENST00000590311 SSPOA2VEC9 5147 aa1.65□□□□□ -2.15
ABCA6-205ENST00000590311 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.64□□□□□ -2.15
ABCA6-205ENST00000590311 PKD1P98161 4303 aa1.64□□□□□ -2.15
ABCA6-205ENST00000590311 LCE3CQ5T5A8 94 aa1.64□□□□□ -2.15
ABCA6-205ENST00000590311 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
ABCA6-205ENST00000590311 MT1FP04733 61 aa1.63□□□□□ -2.15
ABCA6-205ENST00000590311 FAT2Q9NYQ8 4349 aa1.63□□□□□ -2.15
ABCA6-205ENST00000590311 MUC2Q02817 5179 aa1.63□□□□□ -2.15
ABCA6-205ENST00000590311 LOC100996750A0A140TA64 210 aa1.63□□□□□ -2.15
ABCA6-205ENST00000590311 KRTAP4-6Q9BYQ5 205 aa1.63□□□□□ -2.15
ABCA6-205ENST00000590311 KRTAP9-8Q9BYQ0 159 aa1.63□□□□□ -2.15
ABCA6-205ENST00000590311 LCE2BO14633 110 aa1.61□□□□□ -2.15
ABCA6-205ENST00000590311 KRTAP9-3Q9BYQ3 159 aa1.6□□□□□ -2.15
ABCA6-205ENST00000590311 MT1BP07438 61 aa1.6□□□□□ -2.15
ABCA6-205ENST00000590311 LRP2P98164 4655 aa1.58□□□□□ -2.16
ABCA6-205ENST00000590311 LCE3AQ5TA76 89 aa1.58□□□□□ -2.16
ABCA6-205ENST00000590311 MT1GP13640 62 aa1.58□□□□□ -2.16
ABCA6-205ENST00000590311 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
ABCA6-205ENST00000590311 LCE3EQ5T5B0 92 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms